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The map label for this gene is srfA

Identifier: 16764937

GI number: 16764937

Start: 1679771

End: 1681090

Strand: Direct

Name: srfA

Synonym: STM1593

Alternate gene names: NA

Gene position: 1679771-1681090 (Clockwise)

Preceding gene: 16764935

Following gene: 16764938

Centisome position: 34.58

GC content: 55.45

Gene sequence:

>1320_bases
GTGGCAAAATCTCTCTTGCGCAGCGGCAATCTGGATGATTATCAGGCCGTGGGCGGCGGCGGTCAGGCCGTATTTGAATC
AGCATTGCAAATTCGCGAAACGCTTCGTCTGCGTAAACAGCAGGCGATGGTTGACTGTCTGGCGATTCCGCAACTTAACG
ATAATGGCGATCGGGTTGACTGGTATTCGCCGATTGAAGGTCAGGCGATAGCGTGGAAAGCGGCTGACGAAGAGACACGT
TCTCGGGCTTTACGTTATTTAGCCAGCACTTTTGAAAGCGCGGCTGCACTCAGTCGCAAAAGTCTGCAATCCGGTAAAAC
AGCGCTCCAGCTATTTGGTTCGCTACTTGAGAAAGCGACGCAATTTCCCGGTGAAAATCATGTTTTCCTGGTTAACGGCA
AACCGGTTATCACCTTCTGGGGATTCGTTAATCTCAACGAAAATACACGCGATGATGTGCTGGACTGCCTGCGGGTAACC
GAGGCAATCCCCGACATCCCTCTGGTCGAGCCGGAGCCCGAAGAAAAGCCGCTGGTAGAGGCGGCATTTAGTCAGGCGGA
TGAACCTTTGTTAACGTCTGTCATTGAGCCGCCGAAAATGCCGGAGGAACCTGCTGCGCCGCCCGTTATCGTTAGCGAGC
CGAAGCCTGCCGCACCTATCCCGGTTGCTGAGGCGAAAAGAGCTCGTCGTCTACCGCTGTGGAGCTTACCTGTCGCTGCC
GTGGTTATCGCCGCCGTCGCCACGCCTTTTTTCTGGCCATCTTCATCCGTTGACGGGGCCTCTCCTGTTCGCGCCGCGCC
TGTCGCTACCGCGAAAACTGACGTTACCCCCTTGCCTGAACTCACCGCGCATTTGCCGCTGCATCGCGCTGAGGTGACGC
CCGCCCCCAAAGCGGCGCCGTTGCCGGAAGCGCCTGTTATCATTGCCGCTATCCCCAAAGACGCGCTGGTGATGGACAAT
ACGCAGATGAAGCTTGGAACCACGCGCTTTTTAAACGGTAGCTGGCGCATCAGTGTGGATGTCAAAGATCCGATTACCGG
CAAGCCGCCCTCTCTGCGTTATCAGATCCAAAATAACAAAGGCATCGCGCGCGTAGTACATGGCGATAACGTGGTTTGTC
GGGCGGAAATTTTCTCTGGTCTGCATCAAACGGGCGAGCTGATGATTAAAAGTCGCGGCAATGCGCGCTGCACCGACGGT
TCACGTTATCCGATGCCGGAAATTACCTGTAAAGCAGGCGTCAATGACGTCGCAACCTGTACCGCCCGTTATGGCGACCA
CGCGGCAATTCCGTTGACGTTTAAAAAGATAGGTGCCTGA

Upstream 100 bases:

>100_bases
TAATAGACCGAGAATTCGCGCCTTTTTGCCTTTCTTCCGCCGTTTGCTTGCGTATAGACCCCGTAAAGTAGACGCGTGAA
GAAGTCTAAGGGATAACAAC

Downstream 100 bases:

>100_bases
TTTTATGTTGGTCAATCTGTGTGATTACAAACAGAGCGTCACGCTCATTGCAAACAGCGGCGTCCAGTTTCTTGATTTTG
GCTTAACGCCGCAAGAGTCG

Product: virulence protein

Products: NA

Alternate protein names: SsrAB Activated Protein; Virulence Factor; SsrAB Activated Gene; Virulence Effector Protein SrfA; Myosin Light Chain Kinase Smooth

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETR
SRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVT
EAIPDIPLVEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAA
VVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVMDN
TQMKLGTTRFLNGSWRISVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDG
SRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA

Sequences:

>Translated_439_residues
MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETR
SRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVT
EAIPDIPLVEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAA
VVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVMDN
TQMKLGTTRFLNGSWRISVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDG
SRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
>Mature_438_residues
AKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRS
RALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTE
AIPDIPLVEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAAV
VIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVMDNT
QMKLGTTRFLNGSWRISVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGS
RYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47343; Mature: 47212

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVD
CCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
WYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKAT
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEAIPDIPLVEPEPEEKPLVE
HCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAA
HHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHH
VVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
LPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRISVDVKDPITGKPPSLRYQIQNNK
CCCCCEEEEECCCCCEEECCCCEEECCEEEECCEEEEEEEECCCCCCCCCCEEEEEECCC
GIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVATC
CEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHCCCCHHHHH
TARYGDHAAIPLTFKKIGA
HHHCCCCEEEEEEHHHHCC
>Mature Secondary Structure 
AKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVD
CHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
WYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKAT
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
QFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRVTEAIPDIPLVEPEPEEKPLVE
HCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
AAFSQADEPLLTSVIEPPKMPEEPAAPPVIVSEPKPAAPIPVAEAKRARRLPLWSLPVAA
HHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCHHHHHH
VVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAP
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
LPEAPVIIAAIPKDALVMDNTQMKLGTTRFLNGSWRISVDVKDPITGKPPSLRYQIQNNK
CCCCCEEEEECCCCCEEECCCCEEECCEEEECCEEEEEEEECCCCCCCCCCEEEEEECCC
GIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVATC
CEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHCCCCHHHHH
TARYGDHAAIPLTFKKIGA
HHHCCCCEEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA