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The map label for this gene is ssaV

Identifier: 16764764

GI number: 16764764

Start: 1493656

End: 1495701

Strand: Direct

Name: ssaV

Synonym: STM1414

Alternate gene names: 16764764

Gene position: 1493656-1495701 (Clockwise)

Preceding gene: 16764763

Following gene: 16764765

Centisome position: 30.75

GC content: 46.53

Gene sequence:

>2046_bases
ATGCGTTCATGGTTAGGTGAGGGAGTCAGGGCGCAACAGTGGCTCAGTGTATGCGCGGGTCGGCAGGATATGGTTCTGGC
GACGGTGTTATTAATCGCTATTGTGATGATGCTGTTACCTTTGCCGACCTGGATGGTTGATATCCTGATTACTATCAACC
TTATGTTTTCAGTGATCCTGCTCTTAATTGCTATTTATCTTAGTGACCCTCTCGATTTATCGGTATTTCCGTCTTTATTA
CTTATTACTACATTATATCGTTTGTCACTCACAATCAGCACATCACGGCTGGTACTGTTACAACATAATGCCGGTAATAT
TGTGGATGCTTTCGGTAAGTTTGTCGTAGGAGGAAATCTCACCGTTGGGTTGGTCGTATTTACCATCATTACTATCGTGC
AATTTATTGTCATTACAAAAGGTATCGAGAGGGTGGCGGAAGTTAGCGCACGTTTCTCGCTTGATGGGATGCCAGGCAAA
CAAATGAGTATCGATGGCGATTTGCGTGCCGGAGTTATCGATGCAGACCATGCCCGTACATTAAGACAGCATGTCCAGCA
GGAAAGCCGCTTTCTCGGTGCGATGGACGGTGCGATGAAATTTGTTAAAGGCGATACGATTGCCGGTATTATTGTTGTTC
TGGTGAACATTATCGGCGGTATCATTATCGCTATCGTACAATATGATATGTCGATGAGTGAGGCTGTTCACACTTATAGC
GTACTGTCAATCGGAGATGGTTTATGTGGGCAAATTCCATCGCTGCTGATTTCCCTTAGCGCGGGAATTATTGTCACCCG
TGTCCCGGGTGAGAAACGCCAGAACCTGGCGACAGAGTTGAGTTCTCAAATTGCCAGACAACCTCAGTCGCTCATATTAA
CCGCTGTGGTTTTAATGCTCCTCGCTTTAATTCCTGGCTTTCCTTTTATCACTCTCGCTTTCTTTTCAGCGTTGTTAGCA
TTGCCAATTATCCTCATTCGCCGCAAAAAGTCTGTGGTTTCCGCAAATGGCGTCGAAGCACCGGAAAAAGATAGTATGGT
TCCCGGCGCATGTCCTCTAATCTTACGTCTTAGCCCGACGTTACATTCTGCCGACCTGATTCGTGATATTGACGCCATGA
GATGGTTTTTATTTGAGGATACCGGCGTCCCTCTCCCTGAGGTGAATATTGAGGTTTTGCCTGAACCCACCGAAAAATTG
ACGGTACTGCTATATCAGGAACCCGTATTTAGTTTATCTATTCCCGCTCAGGCGGATTATTTATTGATAGGCGCGGACGC
TAGTGTGGTGGGTGACAGCCAGACGTTACCGAACGGGATGGGGCAGATCTGTTGGCTTACAAAAGACATGGCCCATAAGG
CGCAAGGTTTTGGACTGGACGTTTTCGCGGGCAGCCAACGTATCTCTGCCTTATTAAAATGTGTCCTGCTTCGGCATATG
GGAGAGTTTATTGGTGTTCAGGAAACGCGTTATCTAATGAATGCGATGGAAAAAAACTACTCTGAGCTGGTGAAAGAGCT
TCAGCGCCAGTTACCCATTAATAAAATCGCTGAAACTTTGCAACGGCTTGTATCAGAGCGGGTTTCTATTAGAGATTTAC
GTCTTATTTTCGGCACCTTAATTGACTGGGCGCCACGTGAAAAAGATGTCCTGATGTTGACAGAATATGTCCGTATCGCG
CTTCGTCGTCATATTCTGCGTCGTCTTAATCCGGAAGGAAAACCGCTGCCGATTTTGCGGATCGGCGAAGGTATTGAAAA
CCTCGTGCGTGAATCCATTCGCCAGACGGCAATGGGGACCTATACTGCGCTGTCGTCTCGTCATAAGACGCAGATCCTGC
AACTTATCGAGCAGGCGCTGAAGCAGTCAGCCAAATTATTCATTGTCACTTCTGTCGACACCCGACGTTTCTTGCGAAAA
ATTACAGAAGCCACCTTGTTCGACGTACCGATTTTGTCATGGCAGGAATTAGGAGAGGAGAGCCTTATACAAGTGGTAGA
AAGTATTGACCTTAGCGAAGAGGAGTTGGCGGACAATGAAGAATGA

Upstream 100 bases:

>100_bases
TGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATTACATCATCGACAA
ATAAAATTTCTGGAGTCGCA

Downstream 100 bases:

>100_bases
ATTGATGCAACGTCTGAGGCTGAAATATCCGCCCCCCGATGGTTATTGTCGATGGGGCCGAATTCAGGATGTCAGCGCAA
CGTTGTTAAATGCGTGGTTG

Product: secretion system apparatus protein SsaV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MRSWLGEGVRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPSLL
LITTLYRLSLTISTSRLVLLQHNAGNIVDAFGKFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGK
QMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYS
VLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPFITLAFFSALLA
LPIILIRRKKSVVSANGVEAPEKDSMVPGACPLILRLSPTLHSADLIRDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEKL
TVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHM
GEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIA
LRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRK
ITEATLFDVPILSWQELGEESLIQVVESIDLSEEELADNEE

Sequences:

>Translated_681_residues
MRSWLGEGVRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPSLL
LITTLYRLSLTISTSRLVLLQHNAGNIVDAFGKFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGK
QMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYS
VLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPFITLAFFSALLA
LPIILIRRKKSVVSANGVEAPEKDSMVPGACPLILRLSPTLHSADLIRDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEKL
TVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHM
GEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIA
LRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRK
ITEATLFDVPILSWQELGEESLIQVVESIDLSEEELADNEE
>Mature_681_residues
MRSWLGEGVRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVILLLIAIYLSDPLDLSVFPSLL
LITTLYRLSLTISTSRLVLLQHNAGNIVDAFGKFVVGGNLTVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGK
QMSIDGDLRAGVIDADHARTLRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYS
VLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLMLLALIPGFPFITLAFFSALLA
LPIILIRRKKSVVSANGVEAPEKDSMVPGACPLILRLSPTLHSADLIRDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEKL
TVLLYQEPVFSLSIPAQADYLLIGADASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHM
GEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTLIDWAPREKDVLMLTEYVRIA
LRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAMGTYTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRK
ITEATLFDVPILSWQELGEESLIQVVESIDLSEEELADNEE

Specific function: Required For Formation Of The Rod Structure Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG4789

COG function: function code U; Type III secretory pathway, component EscV

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family

Homologues:

Organism=Escherichia coli, GI1788187, Length=686, Percent_Identity=32.798833819242, Blast_Score=329, Evalue=3e-91,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): SSAV_SALTY (P74856)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460379.1
- PRIDE:   P74856
- GeneID:   1252932
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1414
- NMPDR:   fig|99287.1.peg.1370
- HOGENOM:   HBG595253
- OMA:   EWAPREK
- ProtClustDB:   PRK12720
- BioCyc:   STYP99287:STM1414-MONOMER
- InterPro:   IPR001712
- InterPro:   IPR006302
- PRINTS:   PR00949
- TIGRFAMs:   TIGR01399

Pfam domain/function: PF00771 FHIPEP

EC number: NA

Molecular weight: Translated: 75323; Mature: 75323

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00994 FHIPEP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb423084)-; HASH(0xc72c320)-; HASH(0xe5804cc)-; HASH(0xe42e834)-; HASH(0xde20a80)-; HASH(0xe930030)-; HASH(0xbcf3bac)-; HASH(0xb3b121c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSWLGEGVRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVIL
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLIAIYLSDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQHNAGNIVDAFGKFVVGGNL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCHHHHHHCEEECCCC
TVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHH
LRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLML
HHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LALIPGFPFITLAFFSALLALPIILIRRKKSVVSANGVEAPEKDSMVPGACPLILRLSPT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
LHSADLIRDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEKLTVLLYQEPVFSLSIPAQADY
HHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCHHHEEEEEEECCCEEEECCCCCCE
LLIGADASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHM
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
GEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDWAPREKDVLMLTEYVRIALRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAMGT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCHH
SLIQVVESIDLSEEELADNEE
HHHHHHHHCCCCHHHHCCCCH
>Mature Secondary Structure
MRSWLGEGVRAQQWLSVCAGRQDMVLATVLLIAIVMMLLPLPTWMVDILITINLMFSVIL
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
LLIAIYLSDPLDLSVFPSLLLITTLYRLSLTISTSRLVLLQHNAGNIVDAFGKFVVGGNL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCCHHHHHHCEEECCCC
TVGLVVFTIITIVQFIVITKGIERVAEVSARFSLDGMPGKQMSIDGDLRAGVIDADHART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCHHHHH
LRQHVQQESRFLGAMDGAMKFVKGDTIAGIIVVLVNIIGGIIIAIVQYDMSMSEAVHTYS
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VLSIGDGLCGQIPSLLISLSAGIIVTRVPGEKRQNLATELSSQIARQPQSLILTAVVLML
HHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LALIPGFPFITLAFFSALLALPIILIRRKKSVVSANGVEAPEKDSMVPGACPLILRLSPT
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCC
LHSADLIRDIDAMRWFLFEDTGVPLPEVNIEVLPEPTEKLTVLLYQEPVFSLSIPAQADY
HHHHHHHHHHHHHHHHHEECCCCCCCCCCEEECCCCHHHEEEEEEECCCEEEECCCCCCE
LLIGADASVVGDSQTLPNGMGQICWLTKDMAHKAQGFGLDVFAGSQRISALLKCVLLRHM
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH
GEFIGVQETRYLMNAMEKNYSELVKELQRQLPINKIAETLQRLVSERVSIRDLRLIFGTL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDWAPREKDVLMLTEYVRIALRRHILRRLNPEGKPLPILRIGEGIENLVRESIRQTAMGT
HHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
YTALSSRHKTQILQLIEQALKQSAKLFIVTSVDTRRFLRKITEATLFDVPILSWQELGEE
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHCCHH
SLIQVVESIDLSEEELADNEE
HHHHHHHHCCCCHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609