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The map label for this gene is ssaN

Identifier: 16764765

GI number: 16764765

Start: 1495691

End: 1496992

Strand: Direct

Name: ssaN

Synonym: STM1415

Alternate gene names: 16764765

Gene position: 1495691-1496992 (Clockwise)

Preceding gene: 16764764

Following gene: 16764766

Centisome position: 30.79

GC content: 51.23

Gene sequence:

>1302_bases
ATGAAGAATGAATTGATGCAACGTCTGAGGCTGAAATATCCGCCCCCCGATGGTTATTGTCGATGGGGCCGAATTCAGGA
TGTCAGCGCAACGTTGTTAAATGCGTGGTTGCCTGGGGTATTTATGGGCGAGTTGTGCTGTATAAAGCCTGGAGAAGAAC
TTGCTGAAGTCGTGGGGATTAATGGCAGCAAAGCTTTGCTATCTCCTTTTACGAGTACAATCGGGCTTCACTGCGGGCAG
CAAGTGATGGCCTTAAGGCGACGCCATCAGGTTCCCGTGGGCGAAGCGTTATTAGGGCGAGTTATTGATGGCTTTGGTCG
TCCCCTTGATGGCCGCGAACTGCCCGACGTCTGCTGGAAAGACTATGATGCAATGCCTCCTCCCGCAATGGTTCGACAGC
CTATCACTCAACCATTAATGACGGGGATTCGCGCTATTGATAGCGTTGCGACCTGTGGCGAAGGGCAACGAGTGGGTATT
TTTTCTGCTCCTGGCGTGGGGAAAAGCACGCTTCTGGCGATGCTGTGTAATGCGCCAGACGCAGACAGCAATGTTCTGGT
GTTAATTGGTGAACGTGGACGAGAAGTCCGCGAATTCATCGATTTTACACTGTCTGAAGAGACCCGAAAACGTTGTGTCA
TTGTTGTCGCAACCTCTGACAGACCCGCCTTAGAGCGCGTGAGGGCGCTGTTTGTGGCCACCACGATAGCAGAATTTTTT
CGCGATAATGGAAAGCGAGTCGTCTTGCTTGCCGACTCACTGACGCGTTATGCCAGGGCCGCACGGGAAATCGCTCTGGC
CGCCGGAGAGACCGCGGTTTCTGGAGAATATCCGCCAGGCGTATTTAGTGCATTGCCACGACTTTTAGAACGTACGGGAA
TGGGAGAAAAAGGCAGTATTACCGCATTTTATACGGTACTGGTGGAAGGCGATGATATGAATGAGCCGTTGGCGGATGAA
GTCCGTTCACTGCTTGATGGACATATTGTACTATCCCGACGGCTTGCAGAGAGGGGGCATTATCCTGCCATTGACGTGTT
GGCAACGCTCAGCCGCGTTTTTCCAGTCGTTACCAGCCATGAGCATCGTCAACTGGCGGCGATATTGCGACGGTGCCTGG
CGCTTTACCAGGAGGTTGAACTGTTAATACGCATTGGGGAATACCAGCGAGGAGTTGATACAGATACTGACAAAGCCATT
GATACCTATCCGGATATTTGCACATTTTTGCGACAAAGTAAGGATGAAGTATGCGGACCCGAGCTACTTATAGAAAAATT
ACACCAAATACTCACCGAGTGA

Upstream 100 bases:

>100_bases
TTGTTCGACGTACCGATTTTGTCATGGCAGGAATTAGGAGAGGAGAGCCTTATACAAGTGGTAGAAAGTATTGACCTTAG
CGAAGAGGAGTTGGCGGACA

Downstream 100 bases:

>100_bases
TCATGGAAACTTTGCTGGAGATAATCGCGCGGCGTGAAAAGCAATTACGCGGCAAGCTTACCGTACTTGATCAGCAGCAA
CAGGCGATTATTACGGAACA

Product: type III secretion system ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE

Sequences:

>Translated_433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE
>Mature_433_residues
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGINGSKALLSPFTSTIGLHCGQ
QVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWKDYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGI
FSAPGVGKSTLLAMLCNAPDADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSITAFYTVLVEGDDMNEPLADE
VRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSHEHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAI
DTYPDICTFLRQSKDEVCGPELLIEKLHQILTE

Specific function: Probable Catalytic Subunit Of A Protein Translocase For Flagellum-Specific Export, Or A Proton Translocase Involved In Local Circuits At The Flagellum. May Be Involved In A Specialized Protein Export Pathway That Proceeds Without Signal Peptide Cleavage.

COG id: COG1157

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway ATPase

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=326, Percent_Identity=30.9815950920245, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI50345984, Length=311, Percent_Identity=29.5819935691318, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI4757810, Length=311, Percent_Identity=29.5819935691318, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI19913428, Length=355, Percent_Identity=27.887323943662, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI19913424, Length=277, Percent_Identity=27.7978339350181, Blast_Score=115, Evalue=5e-26,
Organism=Homo sapiens, GI19913426, Length=355, Percent_Identity=27.0422535211268, Blast_Score=114, Evalue=1e-25,
Organism=Escherichia coli, GI1788251, Length=427, Percent_Identity=44.0281030444965, Blast_Score=311, Evalue=7e-86,
Organism=Escherichia coli, GI1790170, Length=320, Percent_Identity=32.1875, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1790172, Length=367, Percent_Identity=27.5204359673025, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1790217, Length=250, Percent_Identity=30.4, Blast_Score=85, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI25144756, Length=327, Percent_Identity=30.5810397553517, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71988080, Length=339, Percent_Identity=27.7286135693215, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI71988063, Length=339, Percent_Identity=27.7286135693215, Blast_Score=124, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17570191, Length=353, Percent_Identity=27.4787535410765, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17565854, Length=279, Percent_Identity=29.3906810035842, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17510931, Length=354, Percent_Identity=27.683615819209, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71988074, Length=325, Percent_Identity=25.8461538461538, Blast_Score=103, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6319370, Length=339, Percent_Identity=31.2684365781711, Blast_Score=146, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6322581, Length=344, Percent_Identity=30.5232558139535, Blast_Score=142, Evalue=1e-34,
Organism=Saccharomyces cerevisiae, GI6319603, Length=320, Percent_Identity=28.75, Blast_Score=122, Evalue=9e-29,
Organism=Saccharomyces cerevisiae, GI6320016, Length=254, Percent_Identity=26.3779527559055, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24638766, Length=346, Percent_Identity=30.3468208092486, Blast_Score=148, Evalue=6e-36,
Organism=Drosophila melanogaster, GI28574560, Length=326, Percent_Identity=31.5950920245399, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24658560, Length=340, Percent_Identity=29.1176470588235, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI281361666, Length=356, Percent_Identity=26.9662921348315, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24646341, Length=356, Percent_Identity=26.9662921348315, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI17136796, Length=356, Percent_Identity=26.9662921348315, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24583992, Length=243, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=6e-27,
Organism=Drosophila melanogaster, GI24583988, Length=243, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24583986, Length=243, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24583984, Length=243, Percent_Identity=30.8641975308642, Blast_Score=118, Evalue=7e-27,
Organism=Drosophila melanogaster, GI20129479, Length=241, Percent_Identity=29.8755186721992, Blast_Score=114, Evalue=1e-25,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): SSAN_SALTY (P74857)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460380.1
- ProteinModelPortal:   P74857
- SMR:   P74857
- PRIDE:   P74857
- GeneID:   1252933
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1415
- NMPDR:   fig|99287.1.peg.1371
- HOGENOM:   HBG565875
- OMA:   KLANDHV
- ProtClustDB:   PRK07594
- BioCyc:   STYP99287:STM1415-MONOMER
- BRENDA:   3.6.3.14
- GO:   GO:0005737
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005714
- InterPro:   IPR013380
- SMART:   SM00382
- TIGRFAMs:   TIGR01026
- TIGRFAMs:   TIGR02546

Pfam domain/function: PF00006 ATP-synt_ab

EC number: =3.6.3.14

Molecular weight: Translated: 47823; Mature: 47823

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGI
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCHHHHHHHCC
NGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWK
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
DYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCC
ADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSI
HCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
TAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHCHHCCCCH
ELLIEKLHQILTE
HHHHHHHHHHHCC
>Mature Secondary Structure
MKNELMQRLRLKYPPPDGYCRWGRIQDVSATLLNAWLPGVFMGELCCIKPGEELAEVVGI
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCEEECCCCHHHHHHHCC
NGSKALLSPFTSTIGLHCGQQVMALRRRHQVPVGEALLGRVIDGFGRPLDGRELPDVCWK
CCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHC
DYDAMPPPAMVRQPITQPLMTGIRAIDSVATCGEGQRVGIFSAPGVGKSTLLAMLCNAPD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCC
ADSNVLVLIGERGREVREFIDFTLSEETRKRCVIVVATSDRPALERVRALFVATTIAEFF
CCCCEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
RDNGKRVVLLADSLTRYARAAREIALAAGETAVSGEYPPGVFSALPRLLERTGMGEKGSI
HCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCE
TAFYTVLVEGDDMNEPLADEVRSLLDGHIVLSRRLAERGHYPAIDVLATLSRVFPVVTSH
EEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
EHRQLAAILRRCLALYQEVELLIRIGEYQRGVDTDTDKAIDTYPDICTFLRQSKDEVCGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHCHHCCCCH
ELLIEKLHQILTE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609