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The map label for this gene is ssaM

Identifier: 16764763

GI number: 16764763

Start: 1493303

End: 1493671

Strand: Direct

Name: ssaM

Synonym: STM1413

Alternate gene names: 16764763

Gene position: 1493303-1493671 (Clockwise)

Preceding gene: 16764762

Following gene: 16764764

Centisome position: 30.74

GC content: 42.28

Gene sequence:

>369_bases
ATGGATTGGGATCTCATTACTGAACGTAATATTCAGCTTTTTATTCAATTAGCAGGATTAGCTGAACGGCCTTTAGCAAC
CAATATGTTCTGGCGGCAAGGACAATATGAAACCTATCTAAACTATCATAACGGTCGTATTCACTTATGTCAGATACTCA
AGCAAACCTTCTTAGACGAAGAACTGCTTTTTAAAGCGTTGGCTAACTGGAAACCCGCAGCGTTCCAGGGTATTCCTCAA
CGATTATTTTTGTTGCGCGATGGGCTTGCAATGAGTTGTTCTCCACCTCTTTCCAGCTCCGCCGAGCTCTGGTTACGATT
ACATCATCGACAAATAAAATTTCTGGAGTCGCAATGCGTTCATGGTTAG

Upstream 100 bases:

>100_bases
CGAAACGCTTCGTGAAGTAAAGATAAATCAGGTTTTATTCTGATACCTGGCTTTCAATATTTAGGTAAATTGGCTTTCTG
GCTCATCATGAGGCGTCAGG

Downstream 100 bases:

>100_bases
GTGAGGGAGTCAGGGCGCAACAGTGGCTCAGTGTATGCGCGGGTCGGCAGGATATGGTTCTGGCGACGGTGTTATTAATC
GCTATTGTGATGATGCTGTT

Product: type III secretion system apparatus protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

Sequences:

>Translated_122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG
>Mature_122_residues
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDEELLFKALANWKPAAFQGIPQ
RLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCVHG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSAM_SALTY (P74855)

Other databases:

- EMBL:   Y09357
- EMBL:   AE006468
- RefSeq:   NP_460378.1
- GeneID:   1252931
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1413
- NMPDR:   fig|99287.1.peg.1369
- HOGENOM:   HBG679881
- OMA:   PCESIES
- ProtClustDB:   PRK15353
- BioCyc:   STYP99287:STM1413-MONOMER
- InterPro:   IPR017033
- PIRSF:   PIRSF034789

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14312; Mature: 14312

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDE
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCH
ELLFKALANWKPAAFQGIPQRLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCV
HHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
HG
CC
>Mature Secondary Structure
MDWDLITERNIQLFIQLAGLAERPLATNMFWRQGQYETYLNYHNGRIHLCQILKQTFLDE
CCCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCH
ELLFKALANWKPAAFQGIPQRLFLLRDGLAMSCSPPLSSSAELWLRLHHRQIKFLESQCV
HHHHHHHHCCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
HG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609