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The map label for this gene is xp55 [H]

Identifier: 16764607

GI number: 16764607

Start: 1339123

End: 1340757

Strand: Direct

Name: xp55 [H]

Synonym: STM1255

Alternate gene names: 16764607

Gene position: 1339123-1340757 (Clockwise)

Preceding gene: 16764604

Following gene: 16764608

Centisome position: 27.57

GC content: 54.01

Gene sequence:

>1635_bases
ATGCTGCGCCGGGAGAAACAAAAACAACGCATAATCTGGGACAAATTGATGATTAAAGGCAAACTGGCGCTCGTGACGTG
CGCGCTGACTCTGGTATTCACTTCGTCGCTTTTCGCCGCGTCGGACACGGCAGACGGTCGTACCCTGAAGCTGGCCATTG
GCCCTGAGCCAACGGAAGGCTTTGATCCTATGCTGGGCTGGAGCCACGGCAGCTACTTATTGCTTCATGCGCCGTTGCTT
AAGCAAAACGCCGACATGAGTTGGGGTAATTTACTGACGGAAAAAGTGGATACCAGCCCCGACGGTAAAATCTGGACGCT
AACCTTAAAGCCCGGGCTGAAATTCTCCGATGGCTCGCCATTAACTGCCGAAGATGTCGTTTTTACATACAATAAAGCGG
CGAAGAGCGGCGGTAAAATTGACATGGGCAATTTTAGCCATGCGCGAGCGCTGGACGCACGCCGAATTGAGATGACGCTG
AGCCATCCGCAGAGCACCTTTGTGAATGTACTCGGGTCGTTAGGGATTGTTCCGGCCAGCCGTTATGATGAAAAAACGTT
CGCCCGCGAACCGATAGGCGCCGGTCCGTACCGACTGGTCAGCTTTCAGCCGGGTCAGCAACTGATCGTTGAAGCTAATC
CCTGGTATGCGGGTAAAAAGAATGACTTTAACCGGCTGGTTTTTGTCTTTCTGGATGAAGATAATGCTTATGCCGCCGCG
CGCAGCGGACAGTTGGGACTGGTGCGCATTGCCCCTTCTATGGCGGTGGCCCCGCAGCAGGATAATCTTAAACTCTGGGT
ACGCGATAGCGTTGAAAACCGGGGCATTGTCTTCCCGATGGTGCCAGCCGGTAAAAAGGATGCTAACGATTATCCTGTCG
GCAACGATGTGACCGCTGATGTCGCTATCAGACGCGCAATTAACTATGCCATTAATCGTAAGCAACTGGCGGAACAGGTG
ATGGAAGGCCATGCGATACCCGCCTATAGCGCGGTGCAGGGATTACCGTGGCAAAATCCTTCAGTGATATTCAGCGATGG
CGATATTGCAAAAGCGCGCGCCATCCTGGAAGAGGCTGGCTGGAAAATAAACAGTGCGGGCGTGCGTGAAAAAGCAGGTA
AAGAAGCGCGTCTGACCTTATGGTATGCCAGTGGCGACAGCACCCGACGGGATCTGGCCGAGGCGGTGCGCGCCATGTTG
CAGCCTTTAGGCATTGTCGTCTCGTTGCAATCGGGAAGCTGGGAAACTGTAGAGCGCCATATGCACGCTAACCCTACGCT
GTTTGGCTGGGGAAGTCTGGACCCGATGGAACTCTTCCATCACTACAGCGGGAAAGCCGCTGGTGTGGAATATTATAACC
CGGGCTATTACAGCAACCCTGCGGTAGAAGCACATCTGAAACAGGCTATAGATGCGCCTGACTGGCAAAAGGCGATTCCT
TTCTGGCAGCAGGTTGAGTGGGATGGAAAGCAGGGCGCGGGCGTCCAGGGCGATGCGGCATGGGCATGGCTGCTTAATAT
TCAGCATACCTATCTGGCCAACCCCTGTATTGATCTGGGAAAAGGCGCGCCAGAAATCCACGGTAGCTGGTCGGTGTTAA
ACAATCTTGATGACTGGACCTGGACCTGTCGGTGA

Upstream 100 bases:

>100_bases
TATGATGTTTTTAAAAGATCGTCATACTTTCTGTTCTGCGTCAATTTTTTCATTACAAATGCTCGCCATAATGCCGTCCT
CAGGAGGTCTCCCGACGTTT

Downstream 100 bases:

>100_bases
TGAAATTGTTCTTCAGTCATTTTTTGCGGCTGATTATTCTGTTGGTGCTGGTGGCTGCCGGCACCTTCATTTTGCTTAGC
TTTTCGCCCGTTGATCCTAT

Product: ABC transporter periplasmic binding protein

Products: Ni2; [Cytoplasm]; ADP; phosphate [C]

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR

Sequences:

>Translated_544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR
>Mature_544_residues
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEGFDPMLGWSHGSYLLLHAPLL
KQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTL
SHPQSTFVNVLGSLGIVPASRYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVTADVAIRRAINYAINRKQLAEQV
MEGHAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILEEAGWKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAML
QPLGIVVSLQSGSWETVERHMHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWTWTCR

Specific function: Required for transport of an unidentified substrate [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789887, Length=405, Percent_Identity=24.9382716049383, Blast_Score=97, Evalue=4e-21,
Organism=Escherichia coli, GI1787762, Length=448, Percent_Identity=25.8928571428571, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1787052, Length=487, Percent_Identity=22.7926078028747, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1789966, Length=512, Percent_Identity=23.046875, Blast_Score=82, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60029; Mature: 60029

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCHHHCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC
>Mature Secondary Structure
MLRREKQKQRIIWDKLMIKGKLALVTCALTLVFTSSLFAASDTADGRTLKLAIGPEPTEG
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
FDPMLGWSHGSYLLLHAPLLKQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSP
CCCCCCCCCCCEEEEECHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEEECCCCEECCCCC
LTAEDVVFTYNKAAKSGGKIDMGNFSHARALDARRIEMTLSHPQSTFVNVLGSLGIVPAS
CCHHCEEEEECHHHCCCCCEECCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHCCCCCCC
RYDEKTFAREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVFVFLDEDNAYAAA
CCCCHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEE
RSGQLGLVRIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVTAD
CCCCEEEEEECCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCHHH
VAIRRAINYAINRKQLAEQVMEGHAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILEEAG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHC
WKINSAGVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSLQSGSWETVERH
CEECCCCCHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHH
MHANPTLFGWGSLDPMELFHHYSGKAAGVEYYNPGYYSNPAVEAHLKQAIDAPDWQKAIP
HCCCCCEEECCCCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHCC
FWQQVEWDGKQGAGVQGDAAWAWLLNIQHTYLANPCIDLGKGAPEIHGSWSVLNNLDDWT
HHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHCCCCHHHCCCCCCCCCCHHHHCCCCCCE
WTCR
EEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Ni2; [Periplasm]; ATP; H2O [C]

Specific reaction: Ni2+ [Periplasm] + ATP + H2O = Ni2+ [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3453116 [H]