| Definition | Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 chromosome, complete genome. |
|---|---|
| Accession | NC_003197 |
| Length | 4,857,432 |
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The map label for this gene is 16764604
Identifier: 16764604
GI number: 16764604
Start: 1336322
End: 1337365
Strand: Direct
Name: 16764604
Synonym: STM1252
Alternate gene names: NA
Gene position: 1336322-1337365 (Clockwise)
Preceding gene: 16764603
Following gene: 16764607
Centisome position: 27.51
GC content: 50.67
Gene sequence:
>1044_bases ATGAAATTAGCGCTCGTCAATCGGCAGGTCATTTTACCGGAAAGCGGAACCGAGTCCTTCCAGTGCCATGCCTCTACGCT TGTTCGCTTACCGTGCGGTACGCTCGTGGCCGCATGGTTCGCGGGGTTGCGCGAAGGAAGCGAAGATACAGCCATCTGGC TATCTCGCTATGAACATAATATCTGGACAACACCGCAGCGAGTGGCGGCACGCGAGGGGGAAGCGCACTGGAATCCGGTG TTATTTTACCCGTCGGATAAATTGTGGTTATTTTATAAAGTAGGCAGCGACGTACACGTGTGGAAAACCTGGTTTATCAC CTCCAGCGATCGAGGATTTACCTGGAGTACGCCAGCTCCGTTGGTTAACGATGATATTTTGCCGCGCGGTCCCGTAAAAA ATAAACTCCTGCTGGCATCAAATGGCGCCTGGATTGCGCCAGGGTCGATTGAAAGTCCTGAACGGTGGAGGGCATTTGTG GATCGATCCTCTGACGAAGGAAAACACTGGAGTATCTCTTTTGTACCGCTGGAGCCTGATAACGCTATTTCCGGGACAAA CGTAGCGTTGTGGGATGGTATAAAAAAGGGGAGGTTGTGGGAATGTTGTCTGGAAAACCTCCTGCGCTGGGATGGCGTTA TTCAGCCTACGCTGTGGGAGTCTTCTCCGGGGCATATCCATATGTTGTTACGAAGCACACGCGGGGCAATTTTTCGCAGT GATTCAATCGACTATGGCGCTACCTGGTCTGTTGCCCGCGCGACATCTTTACCGAATAATAATAGTGGTATCGATCTGGT TAGTATGCAGGACGGTACGCTGATTCTTGCGTTAAATCCGGTCAACGGCAACTGGGGAAAGCGCTATCCGCTTTCACTGA TTGCTTCCCAGGATAATGGCGAATCATGGCTACCGCTACTGGACCTGGAAAGTGACCACGGTGAGTATTCTTATCCCGCT ATTATTAGCGAGGGCGGCATCGTACATATCACCTACACGTGGAACCGGAAAAATATCGTATATTGTCGATTACAAACGGT ATAA
Upstream 100 bases:
>100_bases TAGCGGTTCATCGTTTTCACCGCGTTGATGCTATTTCTGCTAACACTACTTTCATACGTAAAAAAGCTGATGCTTTTTAC CTTATTTAATCGAGGCAGGT
Downstream 100 bases:
>100_bases GGCGCTATCAGTCGAAACCGATAGCGCTGGAATAATAATGCCTTGCCCGGCGTGCTCTCTCACGCCGGGATGGCCGAAAT AGTCATGATTTACCGGGTAA
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWSISFVPLEPDNAISGTNVALWDGIKKGRLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGIVHITYTWNRKNIVYCRLQTV
Sequences:
>Translated_347_residues MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWSISFVPLEPDNAISGTNVALWDGIKKGRLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGIVHITYTWNRKNIVYCRLQTV >Mature_347_residues MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHNIWTTPQRVAAREGEAHWNPV LFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAPLVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFV DRSSDEGKHWSISFVPLEPDNAISGTNVALWDGIKKGRLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS DSIDYGATWSVARATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNGESWLPLLDLESDHGEYSYPA IISEGGIVHITYTWNRKNIVYCRLQTV
Specific function: Unknown
COG id: COG4692
COG function: function code G; Predicted neuraminidase (sialidase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38986; Mature: 38986
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHN CEEEEECCEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCC IWTTPQRVAAREGEAHWNPVLFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAP CCCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEECCCCC LVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFVDRSSDEGKHWSISFVPLEPD CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCC NAISGTNVALWDGIKKGRLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEC DSIDYGATWSVARATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNG CCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCC ESWLPLLDLESDHGEYSYPAIISEGGIVHITYTWNRKNIVYCRLQTV CCCCEEEEECCCCCCEECCEEEECCCEEEEEEEECCCEEEEEEEEEC >Mature Secondary Structure MKLALVNRQVILPESGTESFQCHASTLVRLPCGTLVAAWFAGLREGSEDTAIWLSRYEHN CEEEEECCEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCC IWTTPQRVAAREGEAHWNPVLFYPSDKLWLFYKVGSDVHVWKTWFITSSDRGFTWSTPAP CCCCHHHHHHCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEEEEEEECCCCEEECCCCC LVNDDILPRGPVKNKLLLASNGAWIAPGSIESPERWRAFVDRSSDEGKHWSISFVPLEPD CCCCCCCCCCCCCCEEEEECCCCEEECCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCC NAISGTNVALWDGIKKGRLWECCLENLLRWDGVIQPTLWESSPGHIHMLLRSTRGAIFRS CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCEEEEEEECCCCCEEEC DSIDYGATWSVARATSLPNNNSGIDLVSMQDGTLILALNPVNGNWGKRYPLSLIASQDNG CCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCEEEEEECCCC ESWLPLLDLESDHGEYSYPAIISEGGIVHITYTWNRKNIVYCRLQTV CCCCEEEEECCCCCCEECCEEEECCCEEEEEEEECCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA