Click here to switch to the map view.

The map label for this gene is yjhB [H]

Identifier: 16764489

GI number: 16764489

Start: 1221641

End: 1222921

Strand: Direct

Name: yjhB [H]

Synonym: STM1132

Alternate gene names: 16764489

Gene position: 1221641-1222921 (Clockwise)

Preceding gene: 16764488

Following gene: 16764490

Centisome position: 25.15

GC content: 45.28

Gene sequence:

>1281_bases
GTGATAGCAAAATTCTTCCCGTGGTATAGCGAGATAACTCGTCCACAAAAAAATGCTTTATTTTCAGCATGGCTGGGTTA
CGTTTTTGACGGCTTCGACTTTATGCTGATTTTCTACATTATGTATCTGATCAAGGCTGACTTAGGATTGACAGATATGG
AGGGCGCATTCCTTGCCACAGCGGCCTTTATTGGGCGACCATTTGGCGGGGCGCTATTTGGTCTGCTGGCAGACAAATTT
GGCCGTAAGCCGTTGATGATGTGGTCGATAGTTGCCTATTCTGTAGGTACAGGGTTAAGTGGCCTGGCTTCCGGTGTAAT
TATGCTGACGCTTAGTCGCTTCATTGTCGGTATGGGGATGGCGGGGGAGTATGCTTGCGCTTCTACTTATGCCGTGGAAA
GTTGGCCAAAGCATTTAAAATCTAAAGCGAGCGCATTTCTGGTTTCAGGTTTCGGTATTGGTAACATCATAGCAGCCTAT
TTTATGCCGTCATTTGCCGAAGCGTATGGTTGGCGTGCTGCTTTTTTTGTCGGTTTGCTACCCGTTCTTTTAGTAATCTA
CATCCGGGCCAGGGCTCCTGAATCTAAAGAGTGGGAAGAAGCTAAACTCAGTGGTCCCGGAAAGCATTCACAAAGTGCCT
GGTCAGTTTTCTCTTTGTCAATGAAAGGGCTATTTAATCGAGCTCAATTTCCACTGACATTATGTGTATTTATTGTTCTG
TTCTCTATTTTCGGCGCAAACTGGCCGATCTTTGGTCTACTGCCTACATATTTGACGGGAGAGGGCTTTGATACGGGCGT
GGTCTCTAATTTAATGACGGCGGCGGCATTCGGCACTGTATTGGGAAATATCGTTTGGGGTCTGTGCGCAGATAGAATTG
GTTTGAAGAAAACGTTCAGCATTGGTCTTCTCATGTCCTTTTTATTCATTTTCCCGTTATTCAGAATTCCGCAAGATAAT
TATTTACTGCTGGGCGCATGTTTATTCGGTTTAATGGCGACTAACGTAGGTGTTGGCGGGTTGGTTCCCAAATTTCTCTA
CGACTACTTTCCTCTTGAGGTTCGTGGTTTGGGTACCGGGCTGATTTATAATCTTGCTGCGACATCAGGCACATTCAATT
CAATGGCGGCGACCTGGCTTGGAATAACAATGGGGCTAGGCGCTGCGCTAACGTTCATTGTTGCTTTCTGGACCGCAACA
ATTCTACTCATTATTGGCCTATCCATTCCGGATAGACTAAAAGCACGTCGTGAAAGTTTTCAATCAACAAAAGAATTTTA
A

Upstream 100 bases:

>100_bases
CGGAAAGTGCCGATTGATAGTGTCTTATTCGGCAATTGATATGACTTAAAAATTAATTCCGTAAGCATTTCAGACGGTAA
CAGCAAATAAGGGTTTTATT

Downstream 100 bases:

>100_bases
TAGAGGATAAATGATGACGAAATACGGTGTTGTAGGTACAGGTTATTTTGGCGCTGAACTGGCGCGATTTATGTCTAAGG
TTGAAGGGGCGAAAATCACT

Product: sialic acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLTGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRESFQSTKEF

Sequences:

>Translated_426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLTGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRESFQSTKEF
>Mature_426_residues
MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF
GRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAY
FMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVL
FSIFGANWPIFGLLPTYLTGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDN
YLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTAT
ILLIIGLSIPDRLKARRESFQSTKEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI87082404, Length=406, Percent_Identity=57.1428571428571, Blast_Score=473, Evalue=1e-134,
Organism=Escherichia coli, GI87082231, Length=462, Percent_Identity=34.8484848484849, Blast_Score=271, Evalue=8e-74,
Organism=Escherichia coli, GI1790550, Length=392, Percent_Identity=22.9591836734694, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1788292, Length=396, Percent_Identity=24.7474747474747, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788942, Length=389, Percent_Identity=24.9357326478149, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789941, Length=417, Percent_Identity=24.7002398081535, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=209, Percent_Identity=25.8373205741627, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322632, Length=331, Percent_Identity=25.6797583081571, Blast_Score=66, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 46492; Mature: 46492

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCC
>Mature Secondary Structure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HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]