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The map label for this gene is yjhC [H]

Identifier: 16764490

GI number: 16764490

Start: 1222932

End: 1224038

Strand: Direct

Name: yjhC [H]

Synonym: STM1133

Alternate gene names: 16764490

Gene position: 1222932-1224038 (Clockwise)

Preceding gene: 16764489

Following gene: 16764491

Centisome position: 25.18

GC content: 46.52

Gene sequence:

>1107_bases
ATGATGACGAAATACGGTGTTGTAGGTACAGGTTATTTTGGCGCTGAACTGGCGCGATTTATGTCTAAGGTTGAAGGGGC
GAAAATCACTGCGATTTACGATCCGGTAAATGCGGCTCCGATAGCGAAAGAGTTGAACTGTGTCGCCACTGCAACGATGG
AGGCGCTTTGTTCCCATCCTGATGTGGATTGCGTAATTATTGCTTCACCAAATTACTTACATAAAGCGCCAGTCATTGCG
GCGGCTAAAGCGGGTAAACACGTGTTTTGTGAAAAACCTATCGCCTTAAATTACCAGGATTGTAAGGATATGGTTGATGC
CTGCAAAGAAGCTGGTGTTACCTTTATGGCGGGTCACGTTATGAACTTTTTTCACGGGGTTCGCCACGCTAAAGCGCTCA
TCAAAGCTGGTGAAATTGGTGAAGTTACACAAGTTCACACTAAACGTAATGGTTTTGAAGACGTGCAGGATGAGATCTCA
TGGAAGAAGATTCGCGCAAAGTCAGGTGGGCATCTGTATCATCACATTCACGAGCTAGATTGTACACTGTTCATCATGGA
TGAAACCCCATCCCTGGTTTCAATGGCGGCGGGGAATGTTGCGCACAAAGGTGAAAAATTTGGTGATGAAGATGATGTTG
TCCTAATCACCCTTGAGTTTGAAAGCGGTCGTTTCGCGACACTTCAGTGGGGATCATCGTTCCACTACCCTGAGCACTAT
GTATTAATTGAGGGCACGACAGGTGCAATTCTCATTGATATGCAAAACACGGCTGGTTATCTAATAAAAGCGGGCAAAAA
AACACACTTTCTTGTGCATGAAAGCCAGGCGGAGGATGATGATCGTCGCAACGGTAACATATCCAGCGAGATGGATGGCG
CAATCGCTTATGGTAAACCCGGTAAACGTACGCCGATGTGGCTCTCATCAATTATGAAACTGGAGATGCAGTACTTGCAT
GATGTGATAAACGGTCTGGAGCCAGGCGAGGAGTTTGCTAAATTGCTAACGGGAGAAGCGGCGACAAATGCCATTGCTAC
CGCTGATGCTGCGACGCTTTCCTCAAACGAGGGGCGCAAAGTAAAACTCACTGAAATTCTTGGCTAA

Upstream 100 bases:

>100_bases
ACCGCAACAATTCTACTCATTATTGGCCTATCCATTCCGGATAGACTAAAAGCACGTCGTGAAAGTTTTCAATCAACAAA
AGAATTTTAATAGAGGATAA

Downstream 100 bases:

>100_bases
AATTGAAAGCCGGATGGTGGTGTTATTGGCCGGTGGCGCTGCGCTTATGTAGACCGGATAAGGCGCCCGTGAACTGTGCC
GCCATCCGGCAATGGACGGG

Product: dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MMTKYGVVGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATATMEALCSHPDVDCVIIASPNYLHKAPVIA
AAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEIS
WKKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHY
VLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLH
DVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG

Sequences:

>Translated_368_residues
MMTKYGVVGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATATMEALCSHPDVDCVIIASPNYLHKAPVIA
AAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEIS
WKKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHY
VLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLH
DVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG
>Mature_368_residues
MMTKYGVVGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATATMEALCSHPDVDCVIIASPNYLHKAPVIA
AAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHVMNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEIS
WKKIRAKSGGHLYHHIHELDCTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHY
VLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKPGKRTPMWLSSIMKLEMQYLH
DVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRKVKLTEILG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87082405, Length=366, Percent_Identity=62.568306010929, Blast_Score=503, Evalue=1e-144,
Organism=Drosophila melanogaster, GI24581117, Length=225, Percent_Identity=27.5555555555556, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 40107; Mature: 40107

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTKYGVVGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATATMEALCSHP
CCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DVDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHV
CCCEEEEECCCCCHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHH
MNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISWKKIRAKSGGHLYHHIHELD
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECC
CTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHY
EEEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEE
VLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKP
EEEECCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHCCCCCCCCCCCEEEECCC
GKRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHCCHHCCCCCCCCE
VKLTEILG
EEEEECCC
>Mature Secondary Structure
MMTKYGVVGTGYFGAELARFMSKVEGAKITAIYDPVNAAPIAKELNCVATATMEALCSHP
CCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
DVDCVIIASPNYLHKAPVIAAAKAGKHVFCEKPIALNYQDCKDMVDACKEAGVTFMAGHV
CCCEEEEECCCCCHHCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCEEEHHHH
MNFFHGVRHAKALIKAGEIGEVTQVHTKRNGFEDVQDEISWKKIRAKSGGHLYHHIHELD
HHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECC
CTLFIMDETPSLVSMAAGNVAHKGEKFGDEDDVVLITLEFESGRFATLQWGSSFHYPEHY
EEEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCEE
VLIEGTTGAILIDMQNTAGYLIKAGKKTHFLVHESQAEDDDRRNGNISSEMDGAIAYGKP
EEEECCCCEEEEEECCCCCEEEECCCCEEEEEECCCCCCCHHCCCCCCCCCCCEEEECCC
GKRTPMWLSSIMKLEMQYLHDVINGLEPGEEFAKLLTGEAATNAIATADAATLSSNEGRK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHCHHHHCCHHCCCCCCCCE
VKLTEILG
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]