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The map label for this gene is yiiY [H]

Identifier: 16764488

GI number: 16764488

Start: 1220666

End: 1221358

Strand: Direct

Name: yiiY [H]

Synonym: STM1131

Alternate gene names: 16764488

Gene position: 1220666-1221358 (Clockwise)

Preceding gene: 16764487

Following gene: 16764489

Centisome position: 25.13

GC content: 36.08

Gene sequence:

>693_bases
ATGAAAATCAACAAATATCTTCTGGGTATGGTTTCGTTTATAGCATTTTCATCATATCTACAAGCGGCAACCCTTGATTA
TCGGCATGAATATGCTGATAGAACCAGAATTAATAAAGACCGTATTGCTATAATTGAAAAGCTTCCTAACGGCATTGGTT
TTTATGTCGATGCCAGCGTTAAATCGGGAGGAGTAGATGGTGAGCAGGATAAGCATTTAAGCGATCTCGTCGCAAACGCT
ATAGAACTGGGCGTAAGTTATAATTATAAAGTTACGGACAATTTTGTTTTGCAGCCTGGATTTATATTTGAAAGCGGTCC
AGACACTTCAATTTATAAGCCTTATTTAAGGGGGCAATATAATTTTGATTCTGGTGTTTATATGGCTGGTCGTTACCGTT
ATGACTATGCAAGGAAGACAGCTAACTATAGTGATGATGAGAAAACGAATAGATTTGATACTTATATAGGTTATGTTTTT
GATGAGTTGAAATTAGAATATAACTTTACCTGGATGGATAGCGATCAAATTAAATTTGATAACAAAAAAACAAACTATGA
ACATAATGTGGCTTTAGCCTGGAAACTGAATAAGTCATTTACACCATACGTTGAGGTCGGAAATGTAGCGGTGAGAAATA
ATACCGATGAGAGACAGACCCGTTATCGCGTTGGATTACAATACCACTTTTGA

Upstream 100 bases:

>100_bases
TGTTTCGTCTGTAACCTCCTTTACCATGCGTGATGGTAATTTATTAATAAAATAATTTTTTAAATACAAAAATAAAGTTA
ATTGATGAGCGGAGTATTTT

Downstream 100 bases:

>100_bases
GAAAGGTTAAAGAGTTACTGTACTAATCTTTGCTTAGTATTCATATCGATAATCTTATAGCCCGTAGCTACGTTACAGAA
CGTTAGACTTTGTCTTGAGT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKINKYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASVKSGGVDGEQDKHLSDLVANA
IELGVSYNYKVTDNFVLQPGFIFESGPDTSIYKPYLRGQYNFDSGVYMAGRYRYDYARKTANYSDDEKTNRFDTYIGYVF
DELKLEYNFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQYHF

Sequences:

>Translated_230_residues
MKINKYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASVKSGGVDGEQDKHLSDLVANA
IELGVSYNYKVTDNFVLQPGFIFESGPDTSIYKPYLRGQYNFDSGVYMAGRYRYDYARKTANYSDDEKTNRFDTYIGYVF
DELKLEYNFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQYHF
>Mature_230_residues
MKINKYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASVKSGGVDGEQDKHLSDLVANA
IELGVSYNYKVTDNFVLQPGFIFESGPDTSIYKPYLRGQYNFDSGVYMAGRYRYDYARKTANYSDDEKTNRFDTYIGYVF
DELKLEYNFTWMDSDQIKFDNKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082420, Length=241, Percent_Identity=26.1410788381743, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009331
- InterPro:   IPR011250 [H]

Pfam domain/function: PF06178 KdgM [H]

EC number: NA

Molecular weight: Translated: 26815; Mature: 26815

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC
KSGGVDGEQDKHLSDLVANAIELGVSYNYKVTDNFVLQPGFIFESGPDTSIYKPYLRGQY
CCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCEEEECCCCCCEECHHHCCCC
NFDSGVYMAGRYRYDYARKTANYSDDEKTNRFDTYIGYVFDELKLEYNFTWMDSDQIKFD
CCCCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEEEEEEEECCCCEEEC
NKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQYHF
CCCCCCCCCEEEEEEECCCCCCEEEECCEEEECCCHHHHHEEEEEEEECC
>Mature Secondary Structure
MKINKYLLGMVSFIAFSSYLQAATLDYRHEYADRTRINKDRIAIIEKLPNGIGFYVDASV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCC
KSGGVDGEQDKHLSDLVANAIELGVSYNYKVTDNFVLQPGFIFESGPDTSIYKPYLRGQY
CCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCEEECCCEEEECCCCCCEECHHHCCCC
NFDSGVYMAGRYRYDYARKTANYSDDEKTNRFDTYIGYVFDELKLEYNFTWMDSDQIKFD
CCCCCEEEEEEEEEHHHHHCCCCCCCCCCCHHHHHHHHEEEEEEEEEEEEEECCCCEEEC
NKKTNYEHNVALAWKLNKSFTPYVEVGNVAVRNNTDERQTRYRVGLQYHF
CCCCCCCCCEEEEEEECCCCCCEEEECCEEEECCCHHHHHEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]