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The map label for this gene is stbD

Identifier: 16763717

GI number: 16763717

Start: 379705

End: 381030

Strand: Reverse

Name: stbD

Synonym: STM0337

Alternate gene names: NA

Gene position: 381030-379705 (Counterclockwise)

Preceding gene: 16763718

Following gene: 16763716

Centisome position: 7.84

GC content: 52.11

Gene sequence:

>1326_bases
ATGCTTTTTAGTTTCCGAACGCTATTGTTTATCACCAGCCTGTTTGTCAGCGCCGGAACATGGTCGTCATGTATCAAAGT
CACCGATAAGAGCGCGCTCTCTGACGCGGCGATAAAAGCGGGCTACACGGCGCAAAACTGGATCGGCGCAACTGACACAA
ATACCGGTAATATCGGTTTGCCAACGGTGATTAGCGTCAGTAATAGTGAAACATTTCAACCCTCCGGCACGCTATTGGCC
AGTGGGATCGGTAACTTCCTGACGGCCGCCACCGGCACGCCCTATTCCAGTAAACAGGTACTTTACCGCTGCGATACTGC
CGATGCCGGGAAGCTCTATGAGATGTATTCGACAAATGGCGATAGCGCTTTTGCGGGGGCATTTTTTACTCCCGAAGTAG
AAGGCGCCTATTATGATGTGGAGCGTAATGTTGCTGTCCGTATGACAAACCTCAGTACCGGCGAATATTACAGCCGTTTC
TGGAAAGAACGCCAACTTACCGCAGACAGTTGGTTTCAGGATGACAAATATATTTATATTCCTGCCAGCGCGTTTAGCAA
CGTGCTATATGAGATGTTTAAAATTGACTCAAGAAAATATTTTGCCTACCAGAATCCAATGGACCGAGATACCTGGACGC
AGCCTCGGGGTTATATCGCGTTTAAAGGCCCAGGCTTGATTACCGAGCGGATCAAAGCGGGACTGGATCATGCCAGCGAT
TATTATGGCTGGCCCAGCTATTGGCCCGGGGCATGGAGTACATATAATAGCGTCACCTATGTTCGCGGCGCGTTATGTAA
AATCACAGATTATCCTGCGATCGTGAAAATTCCCCCTGTCGCCGTCGGCATATTAGCCGCCGGAGGCAATAGCCAGGCGC
CTTTCCACGTCAGCCTGGAATGTGAGTCCGGTGCCGTGTCCAGTGCCCTCCCGTCCACCAGCGCCGCTAATGTCGCAATG
GGGTTTGTCGTTAATCAACCCACCGCCGTGGCGGCGGCGCGTCGCTTGGGGCTAACCACATCCGCAGGCGGTCTGTCGTG
GCTACTGGACACCCATTATGGCGAACCTGGCGTAGCTTCCGGAGTGGGTATCCGCATCTATAACGATGCCGGTACGCCAA
TTAACCTGTTACCCGATCGGATCAAGACAGGCACTGGCAACGCCCGAGGCTGGTATGGCTATAAAGATTTAACCACACGG
GTATCATCCGGTTCAGTAGAAACCTACAGCGGTGATTTTACTGCCTCGCTTGAGGCGATCGGCGGACAAACAGTAACGGC
AGGAAGCGTGAATGCGCAATTACAGGCAGTGGTTAGTTTTCAGTAA

Upstream 100 bases:

>100_bases
ACAGGGGCAAACCAGCGTTGCCGGGTTGCCTACCAACTCGATCTTCACACCAAAGAACCGTTTCTCTATCTGAACAAAAT
CTGCGAGAAGGAATAGCACA

Downstream 100 bases:

>100_bases
AGTCATATTAACGCTACTTGGGTTGACGGGATGGTATGGCCCGGCACAAGCTGCCGTTAATATTGACAGAACCCGAATTA
TTTTTGCTTCAGATGAGGTC

Product: fimbrial usher

Products: NA

Alternate protein names: Adhesin MrkD; Fimbriae Usher Protein; Fimbriae; Fimbrial Adhesin; Fimbrial Protein Domain-Containing Protein; Fimbrial Protein

Number of amino acids: Translated: 441; Mature: 441

Protein sequence:

>441_residues
MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQNWIGATDTNTGNIGLPTVISVSNSETFQPSGTLLA
SGIGNFLTAATGTPYSSKQVLYRCDTADAGKLYEMYSTNGDSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRF
WKERQLTADSWFQDDKYIYIPASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFKGPGLITERIKAGLDHASD
YYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVAVGILAAGGNSQAPFHVSLECESGAVSSALPSTSAANVAM
GFVVNQPTAVAAARRLGLTTSAGGLSWLLDTHYGEPGVASGVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTTR
VSSGSVETYSGDFTASLEAIGGQTVTAGSVNAQLQAVVSFQ

Sequences:

>Translated_441_residues
MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQNWIGATDTNTGNIGLPTVISVSNSETFQPSGTLLA
SGIGNFLTAATGTPYSSKQVLYRCDTADAGKLYEMYSTNGDSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRF
WKERQLTADSWFQDDKYIYIPASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFKGPGLITERIKAGLDHASD
YYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVAVGILAAGGNSQAPFHVSLECESGAVSSALPSTSAANVAM
GFVVNQPTAVAAARRLGLTTSAGGLSWLLDTHYGEPGVASGVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTTR
VSSGSVETYSGDFTASLEAIGGQTVTAGSVNAQLQAVVSFQ
>Mature_441_residues
MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQNWIGATDTNTGNIGLPTVISVSNSETFQPSGTLLA
SGIGNFLTAATGTPYSSKQVLYRCDTADAGKLYEMYSTNGDSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRF
WKERQLTADSWFQDDKYIYIPASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFKGPGLITERIKAGLDHASD
YYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVAVGILAAGGNSQAPFHVSLECESGAVSSALPSTSAANVAM
GFVVNQPTAVAAARRLGLTTSAGGLSWLLDTHYGEPGVASGVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTTR
VSSGSVETYSGDFTASLEAIGGQTVTAGSVNAQLQAVVSFQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47381; Mature: 47381

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQNWIGATDTNTGNIGL
CCCCHHHHHHHHHHHHCCCCHHHHEEECCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
PTVISVSNSETFQPSGTLLASGIGNFLTAATGTPYSSKQVLYRCDTADAGKLYEMYSTNG
CEEEEECCCCCCCCCCCEEHHCHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
DSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRFWKERQLTADSWFQDDKYIYI
CCEEECEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCEEEE
PASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFKGPGLITERIKAGLDHASD
EHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
YYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVAVGILAAGGNSQAPFHVSLE
CCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCEEEECCEEEEEEEECCCCCCCEEEEEE
CESGAVSSALPSTSAANVAMGFVVNQPTAVAAARRLGLTTSAGGLSWLLDTHYGEPGVAS
ECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCC
GVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTTRVSSGSVETYSGDFTASLEAI
CCEEEEECCCCCCCEECCHHHCCCCCCCCCEECHHHHHEEECCCCEEEECCCCEEEHHHC
GGQTVTAGSVNAQLQAVVSFQ
CCCEEEECCCCCEEEEEEECC
>Mature Secondary Structure
MLFSFRTLLFITSLFVSAGTWSSCIKVTDKSALSDAAIKAGYTAQNWIGATDTNTGNIGL
CCCCHHHHHHHHHHHHCCCCHHHHEEECCHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCC
PTVISVSNSETFQPSGTLLASGIGNFLTAATGTPYSSKQVLYRCDTADAGKLYEMYSTNG
CEEEEECCCCCCCCCCCEEHHCHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECCCC
DSAFAGAFFTPEVEGAYYDVERNVAVRMTNLSTGEYYSRFWKERQLTADSWFQDDKYIYI
CCEEECEEECCCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHHCCCHHHCCCCCCEEEE
PASAFSNVLYEMFKIDSRKYFAYQNPMDRDTWTQPRGYIAFKGPGLITERIKAGLDHASD
EHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
YYGWPSYWPGAWSTYNSVTYVRGALCKITDYPAIVKIPPVAVGILAAGGNSQAPFHVSLE
CCCCCCCCCCCCCCCCCHHHHHCCEEEEECCCCEEEECCEEEEEEEECCCCCCCEEEEEE
CESGAVSSALPSTSAANVAMGFVVNQPTAVAAARRLGLTTSAGGLSWLLDTHYGEPGVAS
ECCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCC
GVGIRIYNDAGTPINLLPDRIKTGTGNARGWYGYKDLTTRVSSGSVETYSGDFTASLEAI
CCEEEEECCCCCCCEECCHHHCCCCCCCCCEECHHHHHEEECCCCEEEECCCCEEEHHHC
GGQTVTAGSVNAQLQAVVSFQ
CCCEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA