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The map label for this gene is stbE [H]

Identifier: 16763716

GI number: 16763716

Start: 378981

End: 379739

Strand: Reverse

Name: stbE [H]

Synonym: STM0336

Alternate gene names: 16763716

Gene position: 379739-378981 (Counterclockwise)

Preceding gene: 16763717

Following gene: 16763714

Centisome position: 7.82

GC content: 47.69

Gene sequence:

>759_bases
ATGCGCAATTACAGGCAGTGGTTAGTTTTCAGTAAAGTCATATTAACGCTACTTGGGTTGACGGGATGGTATGGCCCGGC
ACAAGCTGCCGTTAATATTGACAGAACCCGAATTATTTTTGCTTCAGATGAGGTCGCTCAATCGTTGACATTATCCAACG
ATAATACAACGCCGATGCTGTTACAGGTATGGACCGACGCCGGAAACATTGACGCCTCTCCGGATAACAGCAAAACGCCG
CTGGTGGCGCTGCCGCCGGTATTTAAAATGCAGCCAGGAGAACTGAGAACGCTTCGCCTGCTCCTGAGTTCCCGCCAGCA
GCTGGCAACGGACCGGGAGAGTCTCTTCTGGCTAAACATTTATCAGATACCGCCAGTCACCCAGGACATTAAAAACCACC
CGCGAAAACTGGTGTTACCGCTTCGTTTGAGGCTAAAAATTTTAATTCGCCCGACTGGGCTAAAAGCGCCCACGGAAGCG
GAGGAGAAAAAATTACGCTTTATTGCTAAAGAGAATACTATACGGATAGTTAACCCCACCTCGTGGTATATGAGTTTAAC
ACTAACGACGGATGACAAAAAAAGTATCGGCGATATCATGGTTGCGCCGAAAACAGCACGTGATGTGCCGCTAACACGCT
CGCCAACGCCGGGAGCATCGATAAATTATGCAGTAATCAGTGACTCCGGGAACTGGCGACAATATACCGCCATACTGGAA
AAATATATTAGTGAGAATGATTTTACTCCTGAGTTTTGA

Upstream 100 bases:

>100_bases
ACCACACGGGTATCATCCGGTTCAGTAGAAACCTACAGCGGTGATTTTACTGCCTCGCTTGAGGCGATCGGCGGACAAAC
AGTAACGGCAGGAAGCGTGA

Downstream 100 bases:

>100_bases
TGGGAAATATTCAGGGATACGATCGTATCCCTGAGGCAAGCCAGACTCAGCATGTACCATTGTCAAAAATAGCATTAAGC
TGATATTTTACTTTTTGCAC

Product: fimbrial chaperone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTP
LVALPPVFKMQPGELRTLRLLLSSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEA
EEKKLRFIAKENTIRIVNPTSWYMSLTLTTDDKKSIGDIMVAPKTARDVPLTRSPTPGASINYAVISDSGNWRQYTAILE
KYISENDFTPEF

Sequences:

>Translated_252_residues
MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTP
LVALPPVFKMQPGELRTLRLLLSSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEA
EEKKLRFIAKENTIRIVNPTSWYMSLTLTTDDKKSIGDIMVAPKTARDVPLTRSPTPGASINYAVISDSGNWRQYTAILE
KYISENDFTPEF
>Mature_252_residues
MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTP
LVALPPVFKMQPGELRTLRLLLSSRQQLATDRESLFWLNIYQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEA
EEKKLRFIAKENTIRIVNPTSWYMSLTLTTDDKKSIGDIMVAPKTARDVPLTRSPTPGASINYAVISDSGNWRQYTAILE
KYISENDFTPEF

Specific function: Mediates assembly of pili by forming soluble multimeric complexes with pili subunits as an intermediate step in the assembly process. This protein is involved in type 3 pili assembly [H]

COG id: COG3121

COG function: function code NU; P pilus assembly protein, chaperone PapD

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ig-like (immunoglobulin-like) domain [H]

Homologues:

Organism=Escherichia coli, GI1790771, Length=207, Percent_Identity=31.4009661835749, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1786333, Length=228, Percent_Identity=28.9473684210526, Blast_Score=101, Evalue=6e-23,
Organism=Escherichia coli, GI1789532, Length=223, Percent_Identity=30.9417040358744, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1786743, Length=187, Percent_Identity=30.4812834224599, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786936, Length=217, Percent_Identity=29.4930875576037, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1788428, Length=236, Percent_Identity=26.6949152542373, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787171, Length=216, Percent_Identity=25.462962962963, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI87082203, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788677, Length=192, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI87081806, Length=211, Percent_Identity=28.436018957346, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008962
- InterPro:   IPR001829
- InterPro:   IPR016148
- InterPro:   IPR018046
- InterPro:   IPR016147 [H]

Pfam domain/function: PF02753 Pili_assembly_C; PF00345 Pili_assembly_N [H]

EC number: NA

Molecular weight: Translated: 28537; Mature: 28537

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: PS00635 PILI_CHAPERONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEVAQSLTLSNDNTTPML
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECHHHHHHEEECCCCCCEEE
LQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSRQQLATDRESLFWLNI
EEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
YQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPT
EECCCCHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHEEEEEECCEEEEECCC
SWYMSLTLTTDDKKSIGDIMVAPKTARDVPLTRSPTPGASINYAVISDSGNWRQYTAILE
CEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
KYISENDFTPEF
HHHCCCCCCCCC
>Mature Secondary Structure
MRNYRQWLVFSKVILTLLGLTGWYGPAQAAVNIDRTRIIFASDEVAQSLTLSNDNTTPML
CCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECHHHHHHEEECCCCCCEEE
LQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSRQQLATDRESLFWLNI
EEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
YQIPPVTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKKLRFIAKENTIRIVNPT
EECCCCHHHHHCCCCEEEEEEEEEEEEEEEECCCCCCCCHHHHHEEEEEECCEEEEECCC
SWYMSLTLTTDDKKSIGDIMVAPKTARDVPLTRSPTPGASINYAVISDSGNWRQYTAILE
CEEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH
KYISENDFTPEF
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1670938 [H]