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The map label for this gene is stbC [H]

Identifier: 16763718

GI number: 16763718

Start: 381035

End: 383596

Strand: Reverse

Name: stbC [H]

Synonym: STM0338

Alternate gene names: 16763718

Gene position: 383596-381035 (Counterclockwise)

Preceding gene: 16763719

Following gene: 16763717

Centisome position: 7.9

GC content: 53.94

Gene sequence:

>2562_bases
ATGTCCCCCACCATTAATTTGAACCGCAAAAGCCTTGCGCTATTGATCGCCATAGTTTGCTCAGGCTCCGCGCAAGGTGA
AGAGTATTATTTTGATCCTGCGCTACTTCAGGGGGCCACTTACGGACAAAATATTGCCCGTTTTAATGAACGGCAAACGC
CTTCCGGAGACTATCTTGCCGACGTTTACGTTAATGGCACGCTGGTAACCTCGAGCACTAATATTCGATTTAATGCTGTA
AAAGAGGGTCAACAGACTGAACCCTGCCTGCCCTTATCGGTGATGAAAGCGGCACAGATAAAATCACTCCCCGCGACCGA
CGCTGCGACCGAGTGTCGCCCGCTCAGGGAGTGGGTGCCTCATGCCGGTTGGCAATTTGATAGCGCCACGCTTCGCCTGT
TGCTGACGATTCCAATGACCGAACTTACGCACAAACCGCGCGGTTATATCTCTCCTTCAGAGTGGGATAGCGGCGCGCTG
GCGCTGTTTTTACGCCATAACACAAACTGGACCCACACCGAAAATACCGACAGCCATTATCGCTACCAATACTTATGGAG
CGGTTTAAACATGGGCGTTAACCTCGGACTTTGGCAGGTCCGTCATCAAAGTAATCTGCGCTATGCCAATAGCAACCAGA
GCGGAAGCGCCTGGCGCTATAATAGCGTTCGAACCTGGGTGCAAAGACCTGTCGCGTCTGTTAACAGTATTCTGTCGCTG
GGCGATAGCTATACGGACTCCAGCTTATTCGGCAGTCTGTCTTTTAACGGGGCTAAACTTGTCACCGACGAGCGGATGCG
CCCGCAGGGCAAACGCGGTTATGCGCCGGAAGTTCGGGGCGTAGCGGCCAGTAGCGCGCACGTGGTAGTAAAACAACTGG
GGAAAGTGATTTATGAAACCAACGTTCCGCCGGGCCCATTTTATATTGACGATCTGTACAACACCCGTTATCAAGGCGAT
CTGGAGGTAGAGGTTATCGAGGCCAGCGGTAAAACCTCACGTTTCACCGTGCCTTATTCTTCCGTGCCGGATTCGGTTCG
CCCCGGTAACTGGCACTATTCGCTGGCCTTCGGCAGGGTTCGTCAGTACTACGATATTGAAAATCGTTTCTTTGAGGGAA
CGTTCCAGCACGGCGTTAATAACACCATTACCCTCAACCTCGGTTCACGAATTGCGCAGCGTTACCAGGCATGGCTGGCG
GGCGGCGTCTGGGCCACCGGTATGGGCGCGTTCGGCCTTAACGCCACCTGGTCGAATGCGCGCGCAGAGCATAACGATCG
CCAACAAGGCTGGCGCGCGGAACTCAGTTACAGCAAAACGTTTACCACCGGCACTAACCTGGTACTGGCGGCTTATCGTT
ATTCAACCAACGGCTTTCGCGATCTTCAGGACGTGCTCGGCGTACGCCGGGAAGCAAAAACGGGGATTGATTACTACTCC
GACACGCTGCATCAGCGCAATCGCCTGTCCGCGACGGTAAGCCAGCCGTTAGGACGGCTTGGCACGCTTAACCTCAGCGC
CAGCACCGCAGACTACTACAATAACCAATCGCGTATAACACAGCTACAAATGGGATATAGCAACCAGTGGCGGAATATAA
GCTACGGGGTGAATATCGCACGACAGCGCACCACCTGGGATTACGATCGCTTTTATCACGGCGTTAACGAACCACTGGAC
GTGAGTAGCCGACAAAAATATACCGAAACCACAATGTCGTTTAATGTCTCTATACCGCTGGATTGGGGCGAAAACAGAAC
GTCTGTCGCCATGAATTATAACCAGTCCAGTCAAAGTCGTTCCTCAACCGTATCCATGACCGGCAGTAGCGGTGAAAACA
GCGACCTGTCATGGTCGGTTTATGGCGGCTACGAGCGTTATCGCAATAGCAATAGTGATAGCAGCGCGCCAACGACGTTT
GGCGGTAATCTACAACAAAACACCCGGTTTGGCGCACTTCGCGCCAACTATGACCAGGGTGATAACTATCGTCAGGAAGG
GCTGGGCGCGTCCGGCACCCTGGTTCTTCACCCTGGCGGTCTGACGGCTGGCCCCTATACCAGCGATACCTTTGCGCTTA
TTCATGCCGATGGCGCGCAGGGCGCGATCGTACAAAATGGCCAGGGCGCTGTGGTTGATCGCTTTGGTTACGCCATTCTG
CCTTCGTTATCTCCTTACCGCGTCAATAACGTTACGCTCGATACCCGTAAGATGCGCAGCGATGCCGAACTGACGGGAGG
AAGTCAGCAGATTGTGCCGTATGCTGGCGCCATCGCGCGTGTCAATTTCGCCACTATCAGCGGCAAAGCAGTGCTGATCT
CCGTGAAGATGCCGGATGGCGGCATACCGCCAATGGGCGCTGATGTTTTCAACGGTGAAGGCACAAACATCGGCATGGTC
GGCCAGAGTGGGCAGATTTATGCCCGTATCGCCCATCCGTCGGGTTCTCTACTGGTGCGCTGGGGAACAGGGGCAAACCA
GCGTTGCCGGGTTGCCTACCAACTCGATCTTCACACCAAAGAACCGTTTCTCTATCTGAACAAAATCTGCGAGAAGGAAT
AG

Upstream 100 bases:

>100_bases
ACCTGGTGGCTGCCGGGCAAACGGTCACTCAAATCCTTCTCCGGTACAGTCACCGTTACTTTGGTTAACGACCTGGGCGC
AAGGATAAGCGAGAGCTACG

Downstream 100 bases:

>100_bases
CACAATGCTTTTTAGTTTCCGAACGCTATTGTTTATCACCAGCCTGTTTGTCAGCGCCGGAACATGGTCGTCATGTATCA
AAGTCACCGATAAGAGCGCG

Product: fimbrial usher

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 853; Mature: 852

Protein sequence:

>853_residues
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLADVYVNGTLVTSSTNIRFNAV
KEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGAL
ALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSL
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGD
LEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLA
GGVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLD
VSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTF
GGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMV
GQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE

Sequences:

>Translated_853_residues
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLADVYVNGTLVTSSTNIRFNAV
KEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGAL
ALFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSL
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGD
LEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLA
GGVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLD
VSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTF
GGNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMV
GQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE
>Mature_852_residues
SPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLADVYVNGTLVTSSTNIRFNAVK
EGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVPHAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALA
LFLRHNTNWTHTENTDSHYRYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSLG
DSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDL
EVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRVRQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAG
GVWATGMGAFGLNATWSNARAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYSD
TLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIARQRTTWDYDRFYHGVNEPLDV
SSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSRSSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFG
GNLQQNTRFGALRANYDQGDNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAILP
SLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDGGIPPMGADVFNGEGTNIGMVG
QSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTKEPFLYLNKICEKE

Specific function: Essential for piliation [H]

COG id: COG3188

COG function: function code NU; P pilus assembly protein, porin PapC

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial export usher family [H]

Homologues:

Organism=Escherichia coli, GI1790772, Length=875, Percent_Identity=31.4285714285714, Blast_Score=388, Evalue=1e-109,
Organism=Escherichia coli, GI1789533, Length=860, Percent_Identity=31.9767441860465, Blast_Score=352, Evalue=4e-98,
Organism=Escherichia coli, GI1786744, Length=877, Percent_Identity=31.3568985176739, Blast_Score=350, Evalue=2e-97,
Organism=Escherichia coli, GI1787172, Length=879, Percent_Identity=30.0341296928328, Blast_Score=340, Evalue=2e-94,
Organism=Escherichia coli, GI1788427, Length=860, Percent_Identity=29.3023255813954, Blast_Score=337, Evalue=1e-93,
Organism=Escherichia coli, GI1786332, Length=849, Percent_Identity=30.7420494699647, Blast_Score=335, Evalue=8e-93,
Organism=Escherichia coli, GI87081778, Length=869, Percent_Identity=25.891829689298, Blast_Score=211, Evalue=2e-55,
Organism=Escherichia coli, GI1789610, Length=663, Percent_Identity=23.2277526395173, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000015
- InterPro:   IPR018030 [H]

Pfam domain/function: PF00577 Usher [H]

EC number: NA

Molecular weight: Translated: 94448; Mature: 94317

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: PS01151 FIMBRIAL_USHER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLA
CCCCCCCCHHHHEEEEEEEECCCCCCCEEEECHHHHCCCCCCCHHHHHCCCCCCCCCEEE
DVYVNGTLVTSSTNIRFNAVKEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVP
EEEECCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
HAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALFLRHNTNWTHTENTDSHY
CCCCEECCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSL
EEEEEECCCCCCEEEEEEEEEECCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYET
CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
NVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRV
CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHH
RQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAGGVWATGMGAFGLNATWSNA
HHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
CCCCCCHHCCCEEEEEECEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIA
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHEEEEECCCCCCCCEEEECEEEE
RQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSR
ECCCCCCHHHHHCCCCCCCCCCCCCHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRFGALRANYDQG
CCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
CCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCEEEC
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDG
CCCCCEEECEEEECHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCEEEEEEECCCC
GIPPMGADVFNGEGTNIGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTK
CCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCC
EPFLYLNKICEKE
CCHHHHHHHHCCC
>Mature Secondary Structure 
SPTINLNRKSLALLIAIVCSGSAQGEEYYFDPALLQGATYGQNIARFNERQTPSGDYLA
CCCCCCCHHHHEEEEEEEECCCCCCCEEEECHHHHCCCCCCCHHHHHCCCCCCCCCEEE
DVYVNGTLVTSSTNIRFNAVKEGQQTEPCLPLSVMKAAQIKSLPATDAATECRPLREWVP
EEEECCEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
HAGWQFDSATLRLLLTIPMTELTHKPRGYISPSEWDSGALALFLRHNTNWTHTENTDSHY
CCCCEECCCEEEEEEEECHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE
RYQYLWSGLNMGVNLGLWQVRHQSNLRYANSNQSGSAWRYNSVRTWVQRPVASVNSILSL
EEEEEECCCCCCEEEEEEEEEECCCCEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHC
GDSYTDSSLFGSLSFNGAKLVTDERMRPQGKRGYAPEVRGVAASSAHVVVKQLGKVIYET
CCCCCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEC
NVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYSSVPDSVRPGNWHYSLAFGRV
CCCCCCEEEECCCCCCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHH
RQYYDIENRFFEGTFQHGVNNTITLNLGSRIAQRYQAWLAGGVWATGMGAFGLNATWSNA
HHHHHHHHHHCCCHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
RAEHNDRQQGWRAELSYSKTFTTGTNLVLAAYRYSTNGFRDLQDVLGVRREAKTGIDYYS
CCCCCCHHCCCEEEEEECEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
DTLHQRNRLSATVSQPLGRLGTLNLSASTADYYNNQSRITQLQMGYSNQWRNISYGVNIA
HHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHCCCHHEEEEECCCCCCCCEEEECEEEE
RQRTTWDYDRFYHGVNEPLDVSSRQKYTETTMSFNVSIPLDWGENRTSVAMNYNQSSQSR
ECCCCCCHHHHHCCCCCCCCCCCCCHHEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCC
SSTVSMTGSSGENSDLSWSVYGGYERYRNSNSDSSAPTTFGGNLQQNTRFGALRANYDQG
CCEEEEECCCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
DNYRQEGLGASGTLVLHPGGLTAGPYTSDTFALIHADGAQGAIVQNGQGAVVDRFGYAIL
CCHHHHCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCEEECCCEEEC
PSLSPYRVNNVTLDTRKMRSDAELTGGSQQIVPYAGAIARVNFATISGKAVLISVKMPDG
CCCCCEEECEEEECHHHCCCCCCCCCCCCEEEEECCEEEEEEEEEECCCEEEEEEECCCC
GIPPMGADVFNGEGTNIGMVGQSGQIYARIAHPSGSLLVRWGTGANQRCRVAYQLDLHTK
CCCCCCCEEECCCCCEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCC
EPFLYLNKICEKE
CCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7905461 [H]