| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930011
Identifier: 218930011
GI number: 218930011
Start: 3309463
End: 3309987
Strand: Reverse
Name: 218930011
Synonym: YPO2961
Alternate gene names: NA
Gene position: 3309987-3309463 (Counterclockwise)
Preceding gene: 218930013
Following gene: 218930007
Centisome position: 71.13
GC content: 40.76
Gene sequence:
>525_bases ATGTTGAAGATGAAAAATCGATTTAGTAGCAAAAATCTTTTTGGTGAAAAAAACGTTCATGCTGTTTTTGAACTGAGCCT GCTGTTGAAAGCCTCGTTAGCCATGATGGAGATTATCGCAGGGGTCTTAACCTACTTTGTGACACCCCAGTTTTTACTGA ATACGCTGCATCGCATCACACAAGTGAGTTTTATTGAAAGCCGTGGTGACATTATTGCCAATTATCTGTTGCATGCGGCC CAACATCTCTCCATTAGTAGCTTACATTTCGCTGCGTCATATTTGTTTATCCACGGTGCCATTAAGTTATGGATTATTAT TGGGTTGTGGCGCAAAAAACTCGGTTATTACCCTGTTGCTGTGGCGGTTTTTAGTCTGTTTATTGTTTATCAACTCTATC GCTATACCTTTACTCATTCTCTGCTTTTGATCTTGATAACCATCCTGGATGTGTTTGTTATTGCCCTGACACTGCTTGAA TATCGGCGGTTACGCCATGGGGAAAAAACCTGTTCTGAGAGCTAA
Upstream 100 bases:
>100_bases GCGCTTTAATCGGCACCAGGCGAGCGGTTATTCTATCCTCTGTTGAAGCTATCCTCTATTGAAGCTGTCCTCAGTATGAC CACGTAGGAAACCAGGTGCG
Downstream 100 bases:
>100_bases ACGGGTTCCAAGAACTGAGGCTCCGCTCTGGTTATGGCGACGCGCCGTTTGTCAGGGCAATATTAAGTGCGGCTACTCGG CAAAAATATGTGCCTGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRITQVSFIESRGDIIANYLLHAA QHLSISSLHFAASYLFIHGAIKLWIIIGLWRKKLGYYPVAVAVFSLFIVYQLYRYTFTHSLLLILITILDVFVIALTLLE YRRLRHGEKTCSES
Sequences:
>Translated_174_residues MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRITQVSFIESRGDIIANYLLHAA QHLSISSLHFAASYLFIHGAIKLWIIIGLWRKKLGYYPVAVAVFSLFIVYQLYRYTFTHSLLLILITILDVFVIALTLLE YRRLRHGEKTCSES >Mature_174_residues MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRITQVSFIESRGDIIANYLLHAA QHLSISSLHFAASYLFIHGAIKLWIIIGLWRKKLGYYPVAVAVFSLFIVYQLYRYTFTHSLLLILITILDVFVIALTLLE YRRLRHGEKTCSES
Specific function: Unknown
COG id: COG4331
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20026; Mature: 20026
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRIT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH QVSFIESRGDIIANYLLHAAQHLSISSLHFAASYLFIHGAIKLWIIIGLWRKKLGYYPVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VAVFSLFIVYQLYRYTFTHSLLLILITILDVFVIALTLLEYRRLRHGEKTCSES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLKMKNRFSSKNLFGEKNVHAVFELSLLLKASLAMMEIIAGVLTYFVTPQFLLNTLHRIT CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH QVSFIESRGDIIANYLLHAAQHLSISSLHFAASYLFIHGAIKLWIIIGLWRKKLGYYPVA HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH VAVFSLFIVYQLYRYTFTHSLLLILITILDVFVIALTLLEYRRLRHGEKTCSES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA