| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930013
Identifier: 218930013
GI number: 218930013
Start: 3311163
End: 3312011
Strand: Reverse
Name: 218930013
Synonym: YPO2963
Alternate gene names: NA
Gene position: 3312011-3311163 (Counterclockwise)
Preceding gene: 218930019
Following gene: 218930011
Centisome position: 71.17
GC content: 35.69
Gene sequence:
>849_bases ATGGGACACTCATTGCAAGAAGTGTTAGATGCTGTAGAAAGAAATCCATACAGCAATAGCGAAGATAAAACGCGTCAACG AAATAATGTTATGCGTTCTATTATGTACAATAAACAGAATGAACTGGATCAAGTAAAAAATAGTATTGCAAGTAAATTTA TCAAATGGAGCCTTATAAAGGATCAATTTATCAGTGAGGTGACACGTTATTCATCGGATATAACGGCCAAAGTAAATACT GGTGAAATAACGACTGAGACAGCGATAAAACTATTGGATAAAGAGTTGTCCGATTTGAGAAATCAAGATGAAGAAATGAC AAGGGAAAGAGTAAAGCAGGCTGTCATTATTAAAGCCTCAGTGAAGGAAAATAATAATGTAGAAAGAAACGAAGTTATAA ATTTAGTATTTGCTGGCGTTGGATTTGTTACCGCAGGTTTACAAATTGTTGCTGGTGTTGGGATGGTTGGAAGTGTTGTA GGTTCGATCCCTGGTACACTATTGATTCTTCATGGTGCGAATAACATAGTTGAAAGTGGGTATTATATTTTATATAGAGA ATCATATACTGGCCCAGTTAAATTTGTTTATGAAGGTGTGGGCGCTCAATTTGGGTTGAGCAAGAGTGATTCAGCTATTA TGTATACTGCTGTCGATGTTGCGTTATCAATAAATGGAATAATGAGTTATAAATTAGCGGAAGATGCCACGAGGTTATAT CGTTATGTAAATGCAGATCTTCTCTGGGGACTAAAATCGATGGACATTAAAAATATGAGTTCAATGGGTCTGTTGGCTGA GTTTTTTGGTGGTTATACTGCTATAAATGTTCAAGCGAGAAGTTATTAA
Upstream 100 bases:
>100_bases AGAAATATCTGAAAAAATCAGTTGGTGGTAGTATTCCCCCCCAAATTCATTTAAAAAAGAGATAATGGAAAATAATTTTT TGGCCGGAACCGAATAAATA
Downstream 100 bases:
>100_bases TGGTTATTCGTCACACTCTATTTTTAATGTGGCTGAATTTCTTTTTCTTATGATAAATATTATTGTTTAAAAATTAAATG TTTATATTCACCCCCTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MGHSLQEVLDAVERNPYSNSEDKTRQRNNVMRSIMYNKQNELDQVKNSIASKFIKWSLIKDQFISEVTRYSSDITAKVNT GEITTETAIKLLDKELSDLRNQDEEMTRERVKQAVIIKASVKENNNVERNEVINLVFAGVGFVTAGLQIVAGVGMVGSVV GSIPGTLLILHGANNIVESGYYILYRESYTGPVKFVYEGVGAQFGLSKSDSAIMYTAVDVALSINGIMSYKLAEDATRLY RYVNADLLWGLKSMDIKNMSSMGLLAEFFGGYTAINVQARSY
Sequences:
>Translated_282_residues MGHSLQEVLDAVERNPYSNSEDKTRQRNNVMRSIMYNKQNELDQVKNSIASKFIKWSLIKDQFISEVTRYSSDITAKVNT GEITTETAIKLLDKELSDLRNQDEEMTRERVKQAVIIKASVKENNNVERNEVINLVFAGVGFVTAGLQIVAGVGMVGSVV GSIPGTLLILHGANNIVESGYYILYRESYTGPVKFVYEGVGAQFGLSKSDSAIMYTAVDVALSINGIMSYKLAEDATRLY RYVNADLLWGLKSMDIKNMSSMGLLAEFFGGYTAINVQARSY >Mature_281_residues GHSLQEVLDAVERNPYSNSEDKTRQRNNVMRSIMYNKQNELDQVKNSIASKFIKWSLIKDQFISEVTRYSSDITAKVNTG EITTETAIKLLDKELSDLRNQDEEMTRERVKQAVIIKASVKENNNVERNEVINLVFAGVGFVTAGLQIVAGVGMVGSVVG SIPGTLLILHGANNIVESGYYILYRESYTGPVKFVYEGVGAQFGLSKSDSAIMYTAVDVALSINGIMSYKLAEDATRLYR YVNADLLWGLKSMDIKNMSSMGLLAEFFGGYTAINVQARSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31320; Mature: 31189
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSLQEVLDAVERNPYSNSEDKTRQRNNVMRSIMYNKQNELDQVKNSIASKFIKWSLIK CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DQFISEVTRYSSDITAKVNTGEITTETAIKLLDKELSDLRNQDEEMTRERVKQAVIIKAS HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEE VKENNNVERNEVINLVFAGVGFVTAGLQIVAGVGMVGSVVGSIPGTLLILHGANNIVESG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC YYILYRESYTGPVKFVYEGVGAQFGLSKSDSAIMYTAVDVALSINGIMSYKLAEDATRLY EEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH RYVNADLLWGLKSMDIKNMSSMGLLAEFFGGYTAINVQARSY HHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCEEEEEEEECCC >Mature Secondary Structure GHSLQEVLDAVERNPYSNSEDKTRQRNNVMRSIMYNKQNELDQVKNSIASKFIKWSLIK CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DQFISEVTRYSSDITAKVNTGEITTETAIKLLDKELSDLRNQDEEMTRERVKQAVIIKAS HHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEE VKENNNVERNEVINLVFAGVGFVTAGLQIVAGVGMVGSVVGSIPGTLLILHGANNIVESG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC YYILYRESYTGPVKFVYEGVGAQFGLSKSDSAIMYTAVDVALSINGIMSYKLAEDATRLY EEEEEECCCCCCHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH RYVNADLLWGLKSMDIKNMSSMGLLAEFFGGYTAINVQARSY HHHHHHHHHCCHHCCCCCHHHHHHHHHHHCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA