| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929096
Identifier: 218929096
GI number: 218929096
Start: 2254897
End: 2255361
Strand: Reverse
Name: 218929096
Synonym: YPO1986
Alternate gene names: NA
Gene position: 2255361-2254897 (Counterclockwise)
Preceding gene: 218929097
Following gene: 218929088
Centisome position: 48.46
GC content: 39.57
Gene sequence:
>465_bases ATGAAAAAATATTTTATTCTCATCGCGATGGTTGCAGTTTCAGTTTCAGCGGCAGATAAAAATAATGCTAGCGATGAATA CTATACTTGTCATATGAGCAAGCAATTGGATAGAACCTCCAAAAGCTTGGGTGGAAATCATTTCCCAGAAGAGACTGAAA CGGCAAAAATAAAGTGGGATGGTAGCCGATTTACGGTATATGGCATGAACGGGGGTAATTATATCTCACCATTGTTACAT CGCGCCACGGAAGCAGAAGTGGAAAACCTTGCCAGAAAAGCGGGCGTTGAATTCACCGATGAAGATAGAAAAGATTTAGA CTACGTAATGATGGACGCGGAGGAAAAGACGTTTAATCTATTTGAAAAATCAGATAGTGGCATTAGTTTTAGCGTCATGA ATAAAGAAGAGAACAGTAAGCTGTTTCAACTTTTTTCCGAATGTACCCTTACCAGCAGCCTTTAA
Upstream 100 bases:
>100_bases AGATGACAAGTGAAAATTTTGAGACACTAGGTAACAAGTTATATTCCTGTCTAAAAGATAAAAATACATTCAAATAACAA TGGAAGTTAAGGATTAAACC
Downstream 100 bases:
>100_bases AACCCCGCAGCCAGGGAACCGAACATGGCTATTTCTTACTAAAAATCCAGTGAATCACGTATTGTGGATCATCCGAACGT TGGTTAAATCGCCCCGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MKKYFILIAMVAVSVSAADKNNASDEYYTCHMSKQLDRTSKSLGGNHFPEETETAKIKWDGSRFTVYGMNGGNYISPLLH RATEAEVENLARKAGVEFTDEDRKDLDYVMMDAEEKTFNLFEKSDSGISFSVMNKEENSKLFQLFSECTLTSSL
Sequences:
>Translated_154_residues MKKYFILIAMVAVSVSAADKNNASDEYYTCHMSKQLDRTSKSLGGNHFPEETETAKIKWDGSRFTVYGMNGGNYISPLLH RATEAEVENLARKAGVEFTDEDRKDLDYVMMDAEEKTFNLFEKSDSGISFSVMNKEENSKLFQLFSECTLTSSL >Mature_154_residues MKKYFILIAMVAVSVSAADKNNASDEYYTCHMSKQLDRTSKSLGGNHFPEETETAKIKWDGSRFTVYGMNGGNYISPLLH RATEAEVENLARKAGVEFTDEDRKDLDYVMMDAEEKTFNLFEKSDSGISFSVMNKEENSKLFQLFSECTLTSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17416
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYFILIAMVAVSVSAADKNNASDEYYTCHMSKQLDRTSKSLGGNHFPEETETAKIKWD CCHHHEEHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEC GSRFTVYGMNGGNYISPLLHRATEAEVENLARKAGVEFTDEDRKDLDYVMMDAEEKTFNL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHH FEKSDSGISFSVMNKEENSKLFQLFSECTLTSSL HHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKYFILIAMVAVSVSAADKNNASDEYYTCHMSKQLDRTSKSLGGNHFPEETETAKIKWD CCHHHEEHHHHHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCEEEEEEC GSRFTVYGMNGGNYISPLLHRATEAEVENLARKAGVEFTDEDRKDLDYVMMDAEEKTFNL CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHH FEKSDSGISFSVMNKEENSKLFQLFSECTLTSSL HHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA