| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218929097
Identifier: 218929097
GI number: 218929097
Start: 2255531
End: 2257189
Strand: Reverse
Name: 218929097
Synonym: YPO1987
Alternate gene names: NA
Gene position: 2257189-2255531 (Counterclockwise)
Preceding gene: 218929099
Following gene: 218929096
Centisome position: 48.5
GC content: 39.12
Gene sequence:
>1659_bases TTGAGCTTCGCTCATGCACAGACATTGCCCGATGTCTATTCAGTGGTTGAACGAAAACTGGAAAATGCCCTACCGCTGGC GGAACACCCCCATTATGATGCTCAGGCCCCTTATTTCGAACTGCACCGAGAAATCCTGATGTTTAGCTCACCAGAACGAG CCAATACGCTATTAAAGAAACTTGATTTCAGTTCGAAAGAGGCAATGTTATCACTGAATATTTCTGCTGACTGGATTGCG GGAACAGGTAATCCAGACAAAGCAATGGTATTTTTATCACAGATTGGACTCGAGAAACCGAGCTCATTCTCAGCATACAA GAATTATGTTGATGCCTGGATTGAAAAGAAACAGCCTGAATCTGCGTTAAAGTTACTTATGCTGGATAACAGTGCAAGGA ACTATTATCTTCCCGCTGTTTTAGACGCTTATCGAGATACGCCAGATCAAGCGGTGACTATTTATAAAGATATTTATGGC GACAACATAATAGAACCGACCAATCAATTAAGGATGCTGCTTGCTATTGCAGAAAATTATCGTGTCAACGGTGCCCCCAA AAACACCCTTATTTATACCGATAAAGCACAGGTAATGTTTATCGACGTGCTCAAAAAGAAGAAGAACAATGAAATTCATT TTTATAAAGATTACTTGAATTTGATCAATCTATATTCATTTGCAGGTAATAAGCAACAAGCATTAATATTATCAGAACAG CTACTCAGGGCGGCCGGAGATAAAGGTACCTATTATGATTTGGCATTATCCGGGATCATGGCATTTTACCATGCTAATGG TTTCACTGAAGAATACAATGCATTAATTGCAACCAGCATTGCCACTACAGATAAGTCCTTTAGCTTTGCTCCCAAGCCTA TAGAAGAAATAAAGCTTATCCGGTTGTTGAATGCCACTAACGAAACCGGCCTAATTAAAGAGCGTATTGATAAGCTGATG ATCTCACCAGAATATGCCTGTTATGACGATAGATATTGCTATGAATATAAAATAGATTCGCTTAATTTTCTATATTTAAG CAAATCTGATGCATTAGCTGATAAATATTTAAACATTATTATTGAAGAATCACAAAATCAAAAATTCAATCCATGGGAAA CGGTAACTAAATCCATCGTTAAAAAATTAGTTGATATTGGACGTATCGCCGAAGCTAAGAAGTTGGCTGCAGATGCAGAG GTTATTTATCTCTCACAGCTAAAAGACTCTCCGCCCAAAGAAGTCGAAAGAAATTATAGGGATCTTGCTGAAATGTATGG TTTTGCAGGCGATGTCGTCAGCGCTGAACGAATACTTAATAAGCATGTCACCACCGCCCAAAATTACTTTATTACCGATC TGTTTATAAAAAATAAACAGTGGGATGAAGCCAGAGCGCGTGTTGTGAAAGATACCGGTCTTTCTGGACAAAACCTGACG TTATTGCAAAATATTTGTGCTACCAATACACCTGAATGCATGCAACATATCACGTTCACACTTAAATCAATGTTAACACG TGAATCCATTACCGCAGAAGATGCATCAGGGAATCAACAACTCTACCAGTTGGGGATCATCTACCACTCTCTTGGGATAA AGCCGACCGAGGAACAACAGCTTCTCATTCAAAAATTATATGATAATGCGGCGGCCTAA
Upstream 100 bases:
>100_bases GTTGGAGTGAAGATATCAAAAACAGGCAATTACACAATATTGTTTACAGTCTCTAAACTTTTTTTCAACTTTAGTCTATA CCGCAACATTTTGCTCTGGC
Downstream 100 bases:
>100_bases AAGATAACCTTATTGAGGAGCTGGCAATATTGAGGAGCAGGCAATTAAATGTTGTCTGCTTTCTTTTAAAGATGACAAGT GAAAATTTTGAGACACTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 552; Mature: 551
Protein sequence:
>552_residues MSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKKLDFSSKEAMLSLNISADWIA GTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYG DNIIEPTNQLRMLLAIAENYRVNGAPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLNLINLYSFAGNKQQALILSEQ LLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLIRLLNATNETGLIKERIDKLM ISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAE VIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQWDEARARVVKDTGLSGQNLT LLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQLLIQKLYDNAAA
Sequences:
>Translated_552_residues MSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKKLDFSSKEAMLSLNISADWIA GTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYG DNIIEPTNQLRMLLAIAENYRVNGAPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLNLINLYSFAGNKQQALILSEQ LLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLIRLLNATNETGLIKERIDKLM ISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAE VIYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQWDEARARVVKDTGLSGQNLT LLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQLLIQKLYDNAAA >Mature_551_residues SFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKKLDFSSKEAMLSLNISADWIAG TGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPESALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYGD NIIEPTNQLRMLLAIAENYRVNGAPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLNLINLYSFAGNKQQALILSEQL LRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLIRLLNATNETGLIKERIDKLMI SPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNIIIEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAEV IYLSQLKDSPPKEVERNYRDLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQWDEARARVVKDTGLSGQNLTL LQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQLLIQKLYDNAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62755; Mature: 62624
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKK CCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH LDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPE HCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH SALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYGDNIIEPTNQLRMLLAIAENY HHHEEEEEECCCCCEECHHHHHHHCCCCCHHEEHHHHHCCCCCCCCHHHHHHHHHHHHCC RVNGAPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLNLINLYSFAGNKQQALILSEQ EECCCCCCCEEEECCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH LLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLI HHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHH RLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNII HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCHHHHHHHHHEE IEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAEVIYLSQLKDSPPKEVERNYR EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCHHHHHHHHH DLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQWDEARARVVKDTGLSGQNLT HHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCHH LLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH LLIQKLYDNAAA HHHHHHHHHCCC >Mature Secondary Structure SFAHAQTLPDVYSVVERKLENALPLAEHPHYDAQAPYFELHREILMFSSPERANTLLKK CCCHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH LDFSSKEAMLSLNISADWIAGTGNPDKAMVFLSQIGLEKPSSFSAYKNYVDAWIEKKQPE HCCCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCH SALKLLMLDNSARNYYLPAVLDAYRDTPDQAVTIYKDIYGDNIIEPTNQLRMLLAIAENY HHHEEEEEECCCCCEECHHHHHHHCCCCCHHEEHHHHHCCCCCCCCHHHHHHHHHHHHCC RVNGAPKNTLIYTDKAQVMFIDVLKKKKNNEIHFYKDYLNLINLYSFAGNKQQALILSEQ EECCCCCCCEEEECCCCEEHHHHHHHCCCCCEEEEHHHHHHHHHHHHCCCCCHHHHHHHH LLRAAGDKGTYYDLALSGIMAFYHANGFTEEYNALIATSIATTDKSFSFAPKPIEEIKLI HHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCCCCCCCCCCHHHHHHH RLLNATNETGLIKERIDKLMISPEYACYDDRYCYEYKIDSLNFLYLSKSDALADKYLNII HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEEECCHHHHHHHHHEE IEESQNQKFNPWETVTKSIVKKLVDIGRIAEAKKLAADAEVIYLSQLKDSPPKEVERNYR EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHCCCCHHHHHHHHH DLAEMYGFAGDVVSAERILNKHVTTAQNYFITDLFIKNKQWDEARARVVKDTGLSGQNLT HHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCHH LLQNICATNTPECMQHITFTLKSMLTRESITAEDASGNQQLYQLGIIYHSLGIKPTEEQQ HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHH LLIQKLYDNAAA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA