| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is nagK [H]
Identifier: 218928765
GI number: 218928765
Start: 1853654
End: 1854424
Strand: Direct
Name: nagK [H]
Synonym: YPO1629
Alternate gene names: 218928765
Gene position: 1853654-1854424 (Clockwise)
Preceding gene: 218928764
Following gene: 218928766
Centisome position: 39.83
GC content: 50.58
Gene sequence:
>771_bases ATGTATTACGGTTTTGATATGGGCGGGACCAAAATAGAGCTAGGCGTTTTTGATGAAAACCTGCAGCGAATATGGCATAA GCGAGTGCCTACGCCACGTGAGGATTACCCGCAGTTACTGCAAATATTGCGGGATTTAACCGAGGAAGCCGATACTTATT GCGGTGTTCAAGGCAGTGTGGGTATCGGTATTCCAGGGCTACCCAATGCGGATGATGGCACGGTATTTACTGCGAATGTA CCGTCTGCGATGGGGCAACCATTGCAGGCTGATCTTTCCCGCTTGATCCAGCGTGAAGTCCGTATTGATAACGATGCCAA CTGTTTTGCTCTCTCCGAAGCCTGGGACCCTGAGTTTCGCACTTACCCAACGGTGCTGGGGCTTATTCTCGGCACCGGTG TTGGTGGTGGGTTAATTGTTAATGGCAGTATTGTCAGTGGGCGTAACCACATCACTGGCGAGTTCGGTCATTTCCGTTTA CCAGTAGATGCACTGGATATTCTTGGTGCCGATATTCCCCGCGTCCCCTGTGGTTGTGGCCATCGCGGTTGTATAGAGAA TTATATTTCTGGGCGCGGTTTCGAGTGGATGTACAGTCATTTTTATCAACATACTTTACCTGCCACCGACATTATTGCCC ATTATGCTGCGGGTGAGCCAAAGGCGGTGGCACATGTTGAGCGCTTTATGGATGTGCTGGCGGTCTGTTTGGGCAATCTT TTGACTATGCTCGGATCCCCATTTGGTCGTGGTGGGTGGGGGGTTGTCTAA
Upstream 100 bases:
>100_bases GGTGCTCAGCTTGATTGCCAGTTGGTATCCGGCACGTCGCGCCAGTCGTATTGATCCGGCACGGGTCCTCAGCGGGCAGT AATTGAAGAAAGGCAGGCTT
Downstream 100 bases:
>100_bases TTTCGAAAAAATCTATCAGGAGCTGCCAAAGCGCTTGCCTGCGCATTTATTGCGAGTGGCCCGGTTACCGCGTATCGAAA AAGCGCGTTATGGTGATTCC
Product: N-acetyl-D-glucosamine kinase
Products: NA
Alternate protein names: GlcNAc kinase [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLGSPFGRGGWGVV
Sequences:
>Translated_256_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLGSPFGRGGWGVV >Mature_256_residues MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSVGIGIPGLPNADDGTVFTANV PSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFRTYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRL PVDALDILGADIPRVPCGCGHRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL LTMLGSPFGRGGWGVV
Specific function: Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P [H]
COG id: COG1940
COG function: function code KG; Transcriptional regulator/sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ROK (nagC/xylR) family. NagK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787363, Length=244, Percent_Identity=63.1147540983607, Blast_Score=327, Evalue=3e-91, Organism=Escherichia coli, GI87081733, Length=244, Percent_Identity=39.7540983606557, Blast_Score=167, Evalue=6e-43,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000600 [H]
Pfam domain/function: PF00480 ROK [H]
EC number: =2.7.1.59 [H]
Molecular weight: Translated: 27879; Mature: 27879
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS01125 ROK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLGSPFGRGGWGVV HHHHCCCCCCCCCCCC >Mature Secondary Structure MYYGFDMGGTKIELGVFDENLQRIWHKRVPTPREDYPQLLQILRDLTEEADTYCGVQGSV CCEEECCCCCEEEEECCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC GIGIPGLPNADDGTVFTANVPSAMGQPLQADLSRLIQREVRIDNDANCFALSEAWDPEFR CCCCCCCCCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHH TYPTVLGLILGTGVGGGLIVNGSIVSGRNHITGEFGHFRLPVDALDILGADIPRVPCGCG HHHHHHHHHHHCCCCCCEEEECEEECCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCC HRGCIENYISGRGFEWMYSHFYQHTLPATDIIAHYAAGEPKAVAHVERFMDVLAVCLGNL CHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LTMLGSPFGRGGWGVV HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA