| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is 218928440
Identifier: 218928440
GI number: 218928440
Start: 1446950
End: 1448092
Strand: Reverse
Name: 218928440
Synonym: YPO1289
Alternate gene names: NA
Gene position: 1448092-1446950 (Counterclockwise)
Preceding gene: 218928447
Following gene: 218928439
Centisome position: 31.12
GC content: 56.08
Gene sequence:
>1143_bases ATGCTGCCCACTTCACTCACCAAGGCCAAACTTGTTGGCCGAGTCTGGCGTCCCGGTATAGGCCCGTCGGTTGTCATCGT GCGTAATCACATCTTGTACGACATAACCGAGGCGGTAATCTCAATGGCGGATTTTCTAGAGGACCACCCGTCGGAACGCT TCACCATGTTGACAGGCGAACCACTAGGCACCATTGACGATCTGATCCTCCCCCCCGCCGAGATGGGCTATCACTCAACA CGCCCTTGCTTGCTCGCTCCCTGCGATTTTCAAGCCCTGAAAGCCTGCGGGGTGACCTTTGCTCAAAGTATGGTCGAGCG GGTTATCGACGAACGTACCGCCGGTGATCCGGACCGAGCCGATGCATTGCGCCAACGTATTGGCGCCGTTATCGGTAGCA GCCTGAACAATATTCAAGCGGGCTCAGATCAAGCCGCCAAGGTCAAAGCCGCCTTGATCGCAGAGGGCCTGTGGTCGCAA TACCTCGAAGTTGGCATTGGCCCCGATGCGGAGATTTTCACTAAATCTCAACCCATGTCAGCGGTTGGTTATGGTGCGCA GATCGGCGTTAACCGCATCTCGGCCTGGAGTAATTCGGAACCCGAGGTGGTGTTGGCCGTAGATAGCCAGAGCAATATCC GGGGGGCAACACTTGGCAACGATGTCAACCTGCGCGATATAGAAGGCCGCTCGGCGCTGCTGTTGGGCCAGGCGAAAGAC AACAATGCCGCTTGCGCTATCGGGCCATTTATTCGCCTCTTTGATGAGAACTTCACGCTACACGACATTGAACACGCCAG CTTAACCCTGACGGTCACGGGGGCCGATGGCTTTAACCTGTCCGGCAGCTCGAACATGGCCGAGATCAGCCGTAGACCTA CCGATCTGGTCAGGCAAACGTGCAATACATCACACCAGTACCCCGATGGCTTTATGTTGTTTCTCGGTACCCTGTTCGCT CCAACACAAGATCGCGCCCAGCAAAACGCGGGCTTTACCCACCAGCCAGGTGATCTGGTTGAAATTTCAACACCACTTTT GGGCACCTTACACAATACGGTAGTCTACTCCGACGAGGCCGTTCCCTGGACCTACGGAACCCGTGCGCTGATGCGTAACC TTACTAAGCGGGGGGTGCTGTGA
Upstream 100 bases:
>100_bases AGGGGTCTAAACATAGACCCCTGCTGGTTCGAACGACATTTTTGAGCACTTCCAAACCAATATCTAGTTTTACTAGAAAT CATAAAAGAGGAGATGCCCC
Downstream 100 bases:
>100_bases GCGAATCAAAAATGAGATTGGTCGTCACCGATCAGGCTTTCGGCAATACCGTTTATGAACAAGCAGCGGCCAACGCGGTT GGTGCCGATTTCGCCGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; Fumarylacetoacetase Family Protein; 2-Keto-3-Deoxy-D-Arabinonate Dehydratase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MLPTSLTKAKLVGRVWRPGIGPSVVIVRNHILYDITEAVISMADFLEDHPSERFTMLTGEPLGTIDDLILPPAEMGYHST RPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPDRADALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQ YLEVGIGPDAEIFTKSQPMSAVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQAKD NNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVRQTCNTSHQYPDGFMLFLGTLFA PTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSDEAVPWTYGTRALMRNLTKRGVL
Sequences:
>Translated_380_residues MLPTSLTKAKLVGRVWRPGIGPSVVIVRNHILYDITEAVISMADFLEDHPSERFTMLTGEPLGTIDDLILPPAEMGYHST RPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPDRADALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQ YLEVGIGPDAEIFTKSQPMSAVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQAKD NNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVRQTCNTSHQYPDGFMLFLGTLFA PTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSDEAVPWTYGTRALMRNLTKRGVL >Mature_380_residues MLPTSLTKAKLVGRVWRPGIGPSVVIVRNHILYDITEAVISMADFLEDHPSERFTMLTGEPLGTIDDLILPPAEMGYHST RPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPDRADALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQ YLEVGIGPDAEIFTKSQPMSAVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQAKD NNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVRQTCNTSHQYPDGFMLFLGTLFA PTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSDEAVPWTYGTRALMRNLTKRGVL
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41036; Mature: 41036
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTSLTKAKLVGRVWRPGIGPSVVIVRNHILYDITEAVISMADFLEDHPSERFTMLTGE CCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PLGTIDDLILPPAEMGYHSTRPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPDRA CCCCHHHHCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQYLEVGIGPDAEIFTKSQPMS HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCH AVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQAKD HHCCCHHHCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCC NNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVRQT CCCEEEHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHH CNTSHQYPDGFMLFLGTLFAPTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSDEA HCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCHHHHHHCEEEECCCC VPWTYGTRALMRNLTKRGVL CCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLPTSLTKAKLVGRVWRPGIGPSVVIVRNHILYDITEAVISMADFLEDHPSERFTMLTGE CCCCCHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC PLGTIDDLILPPAEMGYHSTRPCLLAPCDFQALKACGVTFAQSMVERVIDERTAGDPDRA CCCCHHHHCCCCHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH DALRQRIGAVIGSSLNNIQAGSDQAAKVKAALIAEGLWSQYLEVGIGPDAEIFTKSQPMS HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCH AVGYGAQIGVNRISAWSNSEPEVVLAVDSQSNIRGATLGNDVNLRDIEGRSALLLGQAKD HHCCCHHHCHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEECCC NNAACAIGPFIRLFDENFTLHDIEHASLTLTVTGADGFNLSGSSNMAEISRRPTDLVRQT CCCEEEHHHHHHHHCCCCCEEEECCCEEEEEEECCCCCCCCCCCCHHHHHCCHHHHHHHH CNTSHQYPDGFMLFLGTLFAPTQDRAQQNAGFTHQPGDLVEISTPLLGTLHNTVVYSDEA HCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCCCCCCCEEEECCCHHHHHHCEEEECCCC VPWTYGTRALMRNLTKRGVL CCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA