| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is nudH [C]
Identifier: 218928447
GI number: 218928447
Start: 1456277
End: 1456798
Strand: Reverse
Name: nudH [C]
Synonym: YPO1296
Alternate gene names: 218928447
Gene position: 1456798-1456277 (Counterclockwise)
Preceding gene: 218928456
Following gene: 218928440
Centisome position: 31.3
GC content: 48.85
Gene sequence:
>522_bases TTGTCATCAGTAAAACCATCACACCCGCTGACGGTTGCTGACGTTATTTCAAAAGGAGTGAATACCATGTCTGTTACGGT TGGCGTTGGGGTCATTATCGTGAATCAGCAAGGCGAAGTGCTGATGGGTAAACGTTGCAGTCAACATGCGCCCTACTGGT CAATTCCTGGTGGTCATTTGGAGGCGGGAGAGTCCTTTGAGCAAGCAGCTCGACGCGAAGTTTTTGAAGAAACAGGTTTA AATATCAATGAAGTGCAGGTAGTCGCATTGTGTAATAACCTCGCGACCTGGCGTGAGGAAGGCAAACATACCGTCTCCGT CTGTCTACTGGCGCAACACCTTGGTGGGCAACCGGAGCTGAAGGAACCCGAAAAGTGTCAGCAATGGCGCTGGTGCAACC CGCGTGATTTACCTGAGCCACATTTTGAAGCCAGCCGCCACTCGATTGATTTATGGCTAAGTAAACGGTTTTATCATCCT TATGAGTCACCCGTGGGTTTAATAAGCAACACGTTAGATTAG
Upstream 100 bases:
>100_bases TTTCAATTATTGTGTTTCTGGTTCACAATATATGCAAGTTTTCCGCGTCTATTCTTAATGGATTTTTGACATTCCGCACA TTTTCATGGTGAATAGGCGT
Downstream 100 bases:
>100_bases TCAGTAGAGCATTGGGCCAGTCAGTAGAACATGGGTTTAGTCAGTAGAATATGGCTTTAGTCAGCAGAACATGGGATTAA TCAGTAGAAAACTGGATTAG
Product: putative Mut family protein
Products: NA
Alternate protein names: MutT/Nudix Family Protein; ADP-Ribose Pyrophosphatase MutT; MutT-Family Protein; MutT/NUDIX Family Protein; ADP-Ribose Pyrophosphatase; Mut Family Protein; MutT Protein; NUDIX Family NudH Subfamily Hydrolase; MutT/NUDIX Family Hydrolase
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSSVKPSHPLTVADVISKGVNTMSVTVGVGVIIVNQQGEVLMGKRCSQHAPYWSIPGGHLEAGESFEQAARREVFEETGL NINEVQVVALCNNLATWREEGKHTVSVCLLAQHLGGQPELKEPEKCQQWRWCNPRDLPEPHFEASRHSIDLWLSKRFYHP YESPVGLISNTLD
Sequences:
>Translated_173_residues MSSVKPSHPLTVADVISKGVNTMSVTVGVGVIIVNQQGEVLMGKRCSQHAPYWSIPGGHLEAGESFEQAARREVFEETGL NINEVQVVALCNNLATWREEGKHTVSVCLLAQHLGGQPELKEPEKCQQWRWCNPRDLPEPHFEASRHSIDLWLSKRFYHP YESPVGLISNTLD >Mature_172_residues SSVKPSHPLTVADVISKGVNTMSVTVGVGVIIVNQQGEVLMGKRCSQHAPYWSIPGGHLEAGESFEQAARREVFEETGLN INEVQVVALCNNLATWREEGKHTVSVCLLAQHLGGQPELKEPEKCQQWRWCNPRDLPEPHFEASRHSIDLWLSKRFYHPY ESPVGLISNTLD
Specific function: Preferentially Hydrolyzes Diadenosine Penta-Phosphate With ATP As One Of The Reaction Products. Also Able To Hydrolyze Diadenosine Hexa- And Tetra-Phosphate. Has No Activity On Diadenosine Tri-Phosphate, Adp-Ribose, NADH And Udp-Glucose. In The Meningitis
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789194, Length=121, Percent_Identity=33.8842975206612, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.- [C]
Molecular weight: Translated: 19324; Mature: 19193
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSVKPSHPLTVADVISKGVNTMSVTVGVGVIIVNQQGEVLMGKRCSQHAPYWSIPGGHL CCCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEECCHHHCCCCEECCCCCCC EAGESFEQAARREVFEETGLNINEVQVVALCNNLATWREEGKHTVSVCLLAQHLGGQPEL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC KEPEKCQQWRWCNPRDLPEPHFEASRHSIDLWLSKRFYHPYESPVGLISNTLD CCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCHHHHHCCCC >Mature Secondary Structure SSVKPSHPLTVADVISKGVNTMSVTVGVGVIIVNQQGEVLMGKRCSQHAPYWSIPGGHL CCCCCCCCCHHHHHHHCCCCEEEEEEEEEEEEECCCCCEEECCHHHCCCCEECCCCCCC EAGESFEQAARREVFEETGLNINEVQVVALCNNLATWREEGKHTVSVCLLAQHLGGQPEL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC KEPEKCQQWRWCNPRDLPEPHFEASRHSIDLWLSKRFYHPYESPVGLISNTLD CCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHEEHHHHCCCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA