| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is 15922470
Identifier: 15922470
GI number: 15922470
Start: 2143410
End: 2144447
Strand: Direct
Name: 15922470
Synonym: ST2143
Alternate gene names: NA
Gene position: 2143410-2144447 (Clockwise)
Preceding gene: 15922467
Following gene: 15922471
Centisome position: 79.54
GC content: 34.87
Gene sequence:
>1038_bases ATGTCAGTTAAAATTTTTAACGGGGAATTTGATATTCCAGAAAATTCAAGGTCTTTATATATTTTGGTCATAGCAACTAC AGACATAAGCTTAATCCCCGGATTAACAGTAGCTGGTGCCACACCGGAATTAACACATTTTACACCTGCTGCAGATGCTG AATTTTTAATTAAGGGTAAATGCTCAGTTATAAATACTGTTCCAGTTACGCCAAATGGAATTCCTACACCAGCTATCATA ACTAGGGCTTCATTAGAATTTGTAAAAATACCTAGATTAGTGGTAAATGCCGGTAGTAGAATTAAACCAAATTTACCATT AATCGATTTAGGAGGAGAACCAGGAGGTGACATTAGAAAGGGTAGTTTAAGAAAGGAAGTTGCAGAAAGAATATTAAATA ATGGTGTAAGCCTTGGTGAAGAATTCTCAAATTCTTTCGACTTCCTTATTATAGGTGAATCAATACCCGCCGGAACAACA ACTGCCATGGCTGTGTTAGTCGGTTTAGGTTATGATGCTCTTGATAAAGTTAGTTCAGCATCACCGGAAAATCCAAAAGA ACTTAAGAAAAAAATAGTTTATGAAGCAATAAAAGATCTTCCCAGTGATTTAATGGGAAAATTAGCTAAACTTTCTGACC CTATGCTCTTAGGAGTTTCTGGTATAGCATTAGGATTTAAAGGAAAAATATTACTAGCTGGAGGTACTCAGATGACAGCA GCAGCCGCTATAATAAAAGAATTTAATAAAAATAAGCTTAAAGACATTGCGATTGGAACTACTAAATGGATAATTAACGA TAGAAGTTCTGATATAATAGGCTTAGCTAAGGCAGTAGGAATTCCAATTTTAGCTGCATGGCTGGATTTTACTAATTCCA AGTTCGAGGGGCTAAAAGTTTATGAAAAAGGTTTTGTCAAAGAAGGAGTGGGTGCTGGAGGAGCGTCTATTTATGCTATG AAAAGGGGTGTTACAAATGAACAAATATTAGGGAAAGTAGAAGAAATATATCAAAGAATAACTACTAATTTAATGTAA
Upstream 100 bases:
>100_bases GAATTCTTCTAGGCTTACTTTTGTTCCTAACTCAATAAGTCTATAGTTATCCCAAAACACGATAAAGTATTAAAAATTTT TAAAAGAAAAGTTTGTTGAC
Downstream 100 bases:
>100_bases TGCAGACTGAATTTGATTTTTTGTCAATAAGAGAAAAAATAGTATTGCTCCTTAAATATTCCGAAAGACCTTTGACCGCA AAGGAGATTAAAAAGAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSVKIFNGEFDIPENSRSLYILVIATTDISLIPGLTVAGATPELTHFTPAADAEFLIKGKCSVINTVPVTPNGIPTPAII TRASLEFVKIPRLVVNAGSRIKPNLPLIDLGGEPGGDIRKGSLRKEVAERILNNGVSLGEEFSNSFDFLIIGESIPAGTT TAMAVLVGLGYDALDKVSSASPENPKELKKKIVYEAIKDLPSDLMGKLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTA AAAIIKEFNKNKLKDIAIGTTKWIINDRSSDIIGLAKAVGIPILAAWLDFTNSKFEGLKVYEKGFVKEGVGAGGASIYAM KRGVTNEQILGKVEEIYQRITTNLM
Sequences:
>Translated_345_residues MSVKIFNGEFDIPENSRSLYILVIATTDISLIPGLTVAGATPELTHFTPAADAEFLIKGKCSVINTVPVTPNGIPTPAII TRASLEFVKIPRLVVNAGSRIKPNLPLIDLGGEPGGDIRKGSLRKEVAERILNNGVSLGEEFSNSFDFLIIGESIPAGTT TAMAVLVGLGYDALDKVSSASPENPKELKKKIVYEAIKDLPSDLMGKLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTA AAAIIKEFNKNKLKDIAIGTTKWIINDRSSDIIGLAKAVGIPILAAWLDFTNSKFEGLKVYEKGFVKEGVGAGGASIYAM KRGVTNEQILGKVEEIYQRITTNLM >Mature_344_residues SVKIFNGEFDIPENSRSLYILVIATTDISLIPGLTVAGATPELTHFTPAADAEFLIKGKCSVINTVPVTPNGIPTPAIIT RASLEFVKIPRLVVNAGSRIKPNLPLIDLGGEPGGDIRKGSLRKEVAERILNNGVSLGEEFSNSFDFLIIGESIPAGTTT AMAVLVGLGYDALDKVSSASPENPKELKKKIVYEAIKDLPSDLMGKLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTAA AAIIKEFNKNKLKDIAIGTTKWIINDRSSDIIGLAKAVGIPILAAWLDFTNSKFEGLKVYEKGFVKEGVGAGGASIYAMK RGVTNEQILGKVEEIYQRITTNLM
Specific function: Unknown
COG id: COG2038
COG function: function code H; NaMN:DMB phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0284 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2143_SULTO (Q96YM9)
Other databases:
- EMBL: BA000023 - RefSeq: NP_378139.1 - ProteinModelPortal: Q96YM9 - SMR: Q96YM9 - GeneID: 1460216 - GenomeReviews: BA000023_GR - KEGG: sto:ST2143 - NMPDR: fig|273063.1.peg.2307 - HOGENOM: HBG497525 - OMA: QMLAVYA - ProtClustDB: PRK04447 - BioCyc: STOK273063:ST2143-MONOMER - HAMAP: MF_01086 - InterPro: IPR003200 - InterPro: IPR002805 - TIGRFAMs: TIGR00303
Pfam domain/function: PF02277 DBI_PRT; SSF52733 NN:DBI_PRT
EC number: NA
Molecular weight: Translated: 36684; Mature: 36553
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKIFNGEFDIPENSRSLYILVIATTDISLIPGLTVAGATPELTHFTPAADAEFLIKGK CEEEEECCCCCCCCCCCEEEEEEEEECCEECCCCCEECCCCCCCCCCCCCCCCEEEEECC CSVINTVPVTPNGIPTPAIITRASLEFVKIPRLVVNAGSRIKPNLPLIDLGGEPGGDIRK CEEEEEECCCCCCCCCCHHEECCCHHHHHHCHHEECCCCCCCCCCCEEECCCCCCCCCCC GSLRKEVAERILNNGVSLGEEFSNSFDFLIIGESIPAGTTTAMAVLVGLGYDALDKVSSA CHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC SPENPKELKKKIVYEAIKDLPSDLMGKLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTA CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECEEEECCCCEEEEECCCHHHH AAAIIKEFNKNKLKDIAIGTTKWIINDRSSDIIGLAKAVGIPILAAWLDFTNSKFEGLKV HHHHHHHHCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH YEKGFVKEGVGAGGASIYAMKRGVTNEQILGKVEEIYQRITTNLM HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVKIFNGEFDIPENSRSLYILVIATTDISLIPGLTVAGATPELTHFTPAADAEFLIKGK EEEEECCCCCCCCCCCEEEEEEEEECCEECCCCCEECCCCCCCCCCCCCCCCEEEEECC CSVINTVPVTPNGIPTPAIITRASLEFVKIPRLVVNAGSRIKPNLPLIDLGGEPGGDIRK CEEEEEECCCCCCCCCCHHEECCCHHHHHHCHHEECCCCCCCCCCCEEECCCCCCCCCCC GSLRKEVAERILNNGVSLGEEFSNSFDFLIIGESIPAGTTTAMAVLVGLGYDALDKVSSA CHHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHCC SPENPKELKKKIVYEAIKDLPSDLMGKLAKLSDPMLLGVSGIALGFKGKILLAGGTQMTA CCCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECEEEECCCCEEEEECCCHHHH AAAIIKEFNKNKLKDIAIGTTKWIINDRSSDIIGLAKAVGIPILAAWLDFTNSKFEGLKV HHHHHHHHCCCCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH YEKGFVKEGVGAGGASIYAMKRGVTNEQILGKVEEIYQRITTNLM HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11572479