Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is 15922471

Identifier: 15922471

GI number: 15922471

Start: 2144447

End: 2144761

Strand: Direct

Name: 15922471

Synonym: ST2144

Alternate gene names: NA

Gene position: 2144447-2144761 (Clockwise)

Preceding gene: 15922470

Following gene: 15922472

Centisome position: 79.58

GC content: 30.48

Gene sequence:

>315_bases
ATGCAGACTGAATTTGATTTTTTGTCAATAAGAGAAAAAATAGTATTGCTCCTTAAATATTCCGAAAGACCTTTGACCGC
AAAGGAGATTAAAAAGAATTTAGGAATTCAAAAGGAGAAAGAAGTGTATGAACACTTATATCACATTGCAAAGTCCTCTA
AACATAAAGACTATCAACTAATCGTATATTTACCCTATTGCAGAGATTGCGGATACATTTTTAACTTAGAAATTCCTAAA
AAACCAAGTAAATGCCCAAGATGTAAAAGTGAAAATATAGAACCACCTAAGTTTCTAATCAGGGATAAAAAATGA

Upstream 100 bases:

>100_bases
GAGGAGCGTCTATTTATGCTATGAAAAGGGGTGTTACAAATGAACAAATATTAGGGAAAGTAGAAGAAATATATCAAAGA
ATAACTACTAATTTAATGTA

Downstream 100 bases:

>100_bases
GAAAAATCATATTTGTTGACATGGGAGAAACCTTAGTAAGCTTTTCACCAAAATTTCATCAGCCCATATATTATTTTCTA
GTTAAAAAAGGATATAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MQTEFDFLSIREKIVLLLKYSERPLTAKEIKKNLGIQKEKEVYEHLYHIAKSSKHKDYQLIVYLPYCRDCGYIFNLEIPK
KPSKCPRCKSENIEPPKFLIRDKK

Sequences:

>Translated_104_residues
MQTEFDFLSIREKIVLLLKYSERPLTAKEIKKNLGIQKEKEVYEHLYHIAKSSKHKDYQLIVYLPYCRDCGYIFNLEIPK
KPSKCPRCKSENIEPPKFLIRDKK
>Mature_104_residues
MQTEFDFLSIREKIVLLLKYSERPLTAKEIKKNLGIQKEKEVYEHLYHIAKSSKHKDYQLIVYLPYCRDCGYIFNLEIPK
KPSKCPRCKSENIEPPKFLIRDKK

Specific function: Unknown

COG id: COG3357

COG function: function code K; Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12477; Mature: 12477

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTEFDFLSIREKIVLLLKYSERPLTAKEIKKNLGIQKEKEVYEHLYHIAKSSKHKDYQL
CCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IVYLPYCRDCGYIFNLEIPKKPSKCPRCKSENIEPPKFLIRDKK
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MQTEFDFLSIREKIVLLLKYSERPLTAKEIKKNLGIQKEKEVYEHLYHIAKSSKHKDYQL
CCCCCHHHHHHHHHEEEEECCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEE
IVYLPYCRDCGYIFNLEIPKKPSKCPRCKSENIEPPKFLIRDKK
EEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA