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The map label for this gene is yhbZ [C]

Identifier: 15921784

GI number: 15921784

Start: 1486334

End: 1487338

Strand: Reverse

Name: yhbZ [C]

Synonym: ST1491

Alternate gene names: 15921784

Gene position: 1487338-1486334 (Counterclockwise)

Preceding gene: 15921785

Following gene: 15921783

Centisome position: 55.19

GC content: 31.04

Gene sequence:

>1005_bases
ATGTTAAACCCCTTTGAAAATATAAAAATACCACCAAAGACAGAGGACTTAATAAAAATAGTCCTAGATAGGATACCTAA
AATAGGAGGAAAAAATGTAAAGGAGAGAGAAATAAAAAGAATACTTTTTTATAAAGAACAGCTTCAAAAATACAGAGATT
TTGTATTGCAATTTCCTAGAATAGATCAGTTACATCCATTTTATAGAGAAAATATAGAGATTATCGCAGATATAGATAAG
GTAAAAATGTGCTTAGGAGCAATAAACAGGGGAGTTCAGTTATCGTTTAACATAATAGAACGCTATAGAAGGTTAATTAA
ATCTTCAGATGAAAAAGAAGCAAATAGACTAATGAGACAATGTTTTGGAAGAGTAAGTTCTATATTACGTAGTAGAAAGG
ATTGTATTGACTGGCTCATAGACATAACAAGCCAATTAAAAAAATTAAAAGCGATAGATCCTAATCTTCCAACTATCATA
ATTGCTGGTCCTCCAAATGTAGGTAAAAGCACTTTAGTAAGTAAAATCTCATCCGCAAAACCTGAAGTTGCATCATATCC
CTTCACGACTAAAGAAATCCATGTAGGACACATAGATACTGGTATTGTTAAAATTCAGGTAATAGATACTCCAGGTATAC
TTGATAGACCTATGAGTGAAAGAAACAGCATAGAGCTTAAGGCTATAAATGCAATAAAGAACCTTAATGGAATCATACTG
TTCCTCTTTGACGTATCAAATTCTTCAATTTATTCTGCGAAAGAACAATTGGATTTATACAAAGAAGTGAAAAGCATTAA
AAGTGTGGTTATCCCAGTACTGAATAAGATAGATGATAAAAACGAGGAATTATATAAGCAAATAAAGGAAAATATTCTTG
AAAAAGTTTTTGAGATAAGCGCTGAGAAGAATATAGGATTAGATACACTTTTAAATTACGTTATTAACCTACTACAAAAT
GGTCAAATACTGGATAAGCGAGATATTTACCTCAATTCAGGGTGA

Upstream 100 bases:

>100_bases
AGGGAATGATATTAGCTGCTGGTTGTAAAGAAGATGAGGAGAAAGGAATAAAACCTAGAATACTTACAGTAGATGGGGAA
GTTCCCGCAGGAACAAAAGT

Downstream 100 bases:

>100_bases
AGGAGAAGTTATAGGAACACCTTCTAATTTTATTAGACTAGCTGGATGCCATTTAAGATGCATATGGTGTGATACAAAAT
ATGCTTGGCACAAATATGAT

Product: GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLNPFENIKIPPKTEDLIKIVLDRIPKIGGKNVKEREIKRILFYKEQLQKYRDFVLQFPRIDQLHPFYRENIEIIADIDK
VKMCLGAINRGVQLSFNIIERYRRLIKSSDEKEANRLMRQCFGRVSSILRSRKDCIDWLIDITSQLKKLKAIDPNLPTII
IAGPPNVGKSTLVSKISSAKPEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGILDRPMSERNSIELKAINAIKNLNGIIL
FLFDVSNSSIYSAKEQLDLYKEVKSIKSVVIPVLNKIDDKNEELYKQIKENILEKVFEISAEKNIGLDTLLNYVINLLQN
GQILDKRDIYLNSG

Sequences:

>Translated_334_residues
MLNPFENIKIPPKTEDLIKIVLDRIPKIGGKNVKEREIKRILFYKEQLQKYRDFVLQFPRIDQLHPFYRENIEIIADIDK
VKMCLGAINRGVQLSFNIIERYRRLIKSSDEKEANRLMRQCFGRVSSILRSRKDCIDWLIDITSQLKKLKAIDPNLPTII
IAGPPNVGKSTLVSKISSAKPEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGILDRPMSERNSIELKAINAIKNLNGIIL
FLFDVSNSSIYSAKEQLDLYKEVKSIKSVVIPVLNKIDDKNEELYKQIKENILEKVFEISAEKNIGLDTLLNYVINLLQN
GQILDKRDIYLNSG
>Mature_334_residues
MLNPFENIKIPPKTEDLIKIVLDRIPKIGGKNVKEREIKRILFYKEQLQKYRDFVLQFPRIDQLHPFYRENIEIIADIDK
VKMCLGAINRGVQLSFNIIERYRRLIKSSDEKEANRLMRQCFGRVSSILRSRKDCIDWLIDITSQLKKLKAIDPNLPTII
IAGPPNVGKSTLVSKISSAKPEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGILDRPMSERNSIELKAINAIKNLNGIIL
FLFDVSNSSIYSAKEQLDLYKEVKSIKSVVIPVLNKIDDKNEELYKQIKENILEKVFEISAEKNIGLDTLLNYVINLLQN
GQILDKRDIYLNSG

Specific function: Unknown

COG id: COG1084

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP1/OBG family. NOG subfamily [H]

Homologues:

Organism=Homo sapiens, GI55953087, Length=287, Percent_Identity=34.4947735191638, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI24308117, Length=159, Percent_Identity=33.9622641509434, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25145602, Length=288, Percent_Identity=35.0694444444444, Blast_Score=177, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI25145600, Length=271, Percent_Identity=36.1623616236162, Blast_Score=176, Evalue=1e-44,
Organism=Saccharomyces cerevisiae, GI6325164, Length=309, Percent_Identity=31.3915857605178, Blast_Score=165, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19921908, Length=290, Percent_Identity=36.551724137931, Blast_Score=181, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006073
- InterPro:   IPR010674
- InterPro:   IPR005225 [H]

Pfam domain/function: PF06858 NOG1 [H]

EC number: NA

Molecular weight: Translated: 38329; Mature: 38329

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPFENIKIPPKTEDLIKIVLDRIPKIGGKNVKEREIKRILFYKEQLQKYRDFVLQFPR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDQLHPFYRENIEIIADIDKVKMCLGAINRGVQLSFNIIERYRRLIKSSDEKEANRLMRQ
CCCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHH
CFGRVSSILRSRKDCIDWLIDITSQLKKLKAIDPNLPTIIIAGPPNVGKSTLVSKISSAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCC
PEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGILDRPMSERNSIELKAINAIKNLNGIIL
CCHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEE
FLFDVSNSSIYSAKEQLDLYKEVKSIKSVVIPVLNKIDDKNEELYKQIKENILEKVFEIS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEKNIGLDTLLNYVINLLQNGQILDKRDIYLNSG
CCCCCCHHHHHHHHHHHHCCCCEECCCCEEECCC
>Mature Secondary Structure
MLNPFENIKIPPKTEDLIKIVLDRIPKIGGKNVKEREIKRILFYKEQLQKYRDFVLQFPR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IDQLHPFYRENIEIIADIDKVKMCLGAINRGVQLSFNIIERYRRLIKSSDEKEANRLMRQ
CCCCCHHHHCCCCEEEHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHH
CFGRVSSILRSRKDCIDWLIDITSQLKKLKAIDPNLPTIIIAGPPNVGKSTLVSKISSAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCC
PEVASYPFTTKEIHVGHIDTGIVKIQVIDTPGILDRPMSERNSIELKAINAIKNLNGIIL
CCHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCEEHHHHHHHHCCCCEEE
FLFDVSNSSIYSAKEQLDLYKEVKSIKSVVIPVLNKIDDKNEELYKQIKENILEKVFEIS
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AEKNIGLDTLLNYVINLLQNGQILDKRDIYLNSG
CCCCCCHHHHHHHHHHHHCCCCEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]