| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 15921258
Identifier: 15921258
GI number: 15921258
Start: 994913
End: 996430
Strand: Direct
Name: 15921258
Synonym: ST1012
Alternate gene names: NA
Gene position: 994913-996430 (Clockwise)
Preceding gene: 15921254
Following gene: 15921259
Centisome position: 36.92
GC content: 34.12
Gene sequence:
>1518_bases ATGAGTAGGAGTTTGTTTGTTAGAGAAAGCTCTGGGTTAGTAAAAAATGTAAGTGCATTAGACTCAGTAATGCTAAATTT AGGTAATATGTCAGCTGGAATAGCACTATTTACTTCAATTTCGCCATATATTCCACCTGGCGGAGTAATATGGATTGCAT CATTAATAGGACTCCTTCTAACATTACCTCAAGCATATATATACATTTATTTATCGGGTAAGATACCAAAAACTGGCGGT GATTATATTTGGCTCTCAAGAATCTTACATGGTAGTGTTGGAGTTACAATGGCCTTTGCTTTAATGATTGAGTCTACAGC ATATTTTGCATTAGTGGCTTACTTCTTCTCATCTGCAGTTAGTACTGTAATTGGGACTATTGGTACAATGGATGGGATAA AATCATTAGTAGCCTTATCATCGTCATTAACCGCTCCTATTCCTTCTTATGTACTTGGAGCGGGTATTTTTGGTATAATA ATAGCGTTTAATATATTTAAAGCAAAATGGGGTTATTCATTAGTGACTATAAGTACTCTTATCTCTCTAGTTACTACAAT AATAGCTATGATTGTAATTGCTGTTAATATACCCGATTTTAGTACAGCTATTGTACCGTTTTTATCGAAAGAAGGAATAA TGCCTCCACCTAATTACTCTTCATCAGTCCCTCCACCTAATTTATTAGTCTCTTTGTCTGGAATATTACCACTTTTAGCA ATATTTACTTATCCATGGATGCAGGCAAGTCCTGCAGTAGCTTCAGAAACAAAAAAGGTGAAATATGTCCAAATGGGAGT AATATTACCCCTTTTAGTTACTGGAATTCTGATAACTTTAGGTTTCGCATTGATGTATATAGCTGGTGGATACACTCTCA CAAATTATTTATTTACTAATCCATCGTCAGCTTTTATTTATACCTTTTGGACAGTTGCAATGGGTTTAACCACAAATCAA GTGTTGCAATGGATTATTGGAATAGGTTTAATGACATGGGAGTTTGCTGTATTAGCTTATGGTGTTATAGTCTTTTCAAG ATATATATTTGCAATGGCTTTTGATAGAGTATTCCCAGAAATTTTCACTAGGCTAAATAGATTCGGATCACCAGTTTATA CTCATTTATTTGATTTAGGCTTAACATTAGCATTTTTAGTATTGCCAGTAGTTTCAATCAGTGGTGCGACCGCGCTTTAT GGCGCAATAGTTATAGGCATGATTTACTTCTTTACGGTAAGTATTGCTGGAGTTCTTTATGGAATAAGAAATAAGGTTCT ATCATTGATAATAGCCGGTTTATTTGAGGCTGGATATTTTGTCTATTTAACTTACGAATCTATTACAAATCCTGTGTTTG GTTTTGCTGAATCTAATGGTCTGCCGAATCCTATAACTTTAGGGTTTGTTATAGGAAGTTTTGTAGTAGGCGTAATAATT TACTTTATTGCCAGAAGGATAAATTTAAGTAAAGGAATTGATTTAGAGTTACTGTATAAAGAAATACCCCCGGATTAA
Upstream 100 bases:
>100_bases TGTATCTTAATGGAGTAATATAAACATTATTTTTTATCTAATTATAGAATTTATATAATGGGCATAAATCTATTTAAATC ACCCTAAAATATTTTCTATT
Downstream 100 bases:
>100_bases CTTAATTAAGTAAATTCACTCTTTTTTCTTTTGTCAGAAATTATTTAGTTAAGATAAGAAAAAGATATAATAATAATACT CTTTATTTTATTTAATGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Transporter; Amino Acid Permease-Associated Protein
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MSRSLFVRESSGLVKNVSALDSVMLNLGNMSAGIALFTSISPYIPPGGVIWIASLIGLLLTLPQAYIYIYLSGKIPKTGG DYIWLSRILHGSVGVTMAFALMIESTAYFALVAYFFSSAVSTVIGTIGTMDGIKSLVALSSSLTAPIPSYVLGAGIFGII IAFNIFKAKWGYSLVTISTLISLVTTIIAMIVIAVNIPDFSTAIVPFLSKEGIMPPPNYSSSVPPPNLLVSLSGILPLLA IFTYPWMQASPAVASETKKVKYVQMGVILPLLVTGILITLGFALMYIAGGYTLTNYLFTNPSSAFIYTFWTVAMGLTTNQ VLQWIIGIGLMTWEFAVLAYGVIVFSRYIFAMAFDRVFPEIFTRLNRFGSPVYTHLFDLGLTLAFLVLPVVSISGATALY GAIVIGMIYFFTVSIAGVLYGIRNKVLSLIIAGLFEAGYFVYLTYESITNPVFGFAESNGLPNPITLGFVIGSFVVGVII YFIARRINLSKGIDLELLYKEIPPD
Sequences:
>Translated_505_residues MSRSLFVRESSGLVKNVSALDSVMLNLGNMSAGIALFTSISPYIPPGGVIWIASLIGLLLTLPQAYIYIYLSGKIPKTGG DYIWLSRILHGSVGVTMAFALMIESTAYFALVAYFFSSAVSTVIGTIGTMDGIKSLVALSSSLTAPIPSYVLGAGIFGII IAFNIFKAKWGYSLVTISTLISLVTTIIAMIVIAVNIPDFSTAIVPFLSKEGIMPPPNYSSSVPPPNLLVSLSGILPLLA IFTYPWMQASPAVASETKKVKYVQMGVILPLLVTGILITLGFALMYIAGGYTLTNYLFTNPSSAFIYTFWTVAMGLTTNQ VLQWIIGIGLMTWEFAVLAYGVIVFSRYIFAMAFDRVFPEIFTRLNRFGSPVYTHLFDLGLTLAFLVLPVVSISGATALY GAIVIGMIYFFTVSIAGVLYGIRNKVLSLIIAGLFEAGYFVYLTYESITNPVFGFAESNGLPNPITLGFVIGSFVVGVII YFIARRINLSKGIDLELLYKEIPPD >Mature_504_residues SRSLFVRESSGLVKNVSALDSVMLNLGNMSAGIALFTSISPYIPPGGVIWIASLIGLLLTLPQAYIYIYLSGKIPKTGGD YIWLSRILHGSVGVTMAFALMIESTAYFALVAYFFSSAVSTVIGTIGTMDGIKSLVALSSSLTAPIPSYVLGAGIFGIII AFNIFKAKWGYSLVTISTLISLVTTIIAMIVIAVNIPDFSTAIVPFLSKEGIMPPPNYSSSVPPPNLLVSLSGILPLLAI FTYPWMQASPAVASETKKVKYVQMGVILPLLVTGILITLGFALMYIAGGYTLTNYLFTNPSSAFIYTFWTVAMGLTTNQV LQWIIGIGLMTWEFAVLAYGVIVFSRYIFAMAFDRVFPEIFTRLNRFGSPVYTHLFDLGLTLAFLVLPVVSISGATALYG AIVIGMIYFFTVSIAGVLYGIRNKVLSLIIAGLFEAGYFVYLTYESITNPVFGFAESNGLPNPITLGFVIGSFVVGVIIY FIARRINLSKGIDLELLYKEIPPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54580; Mature: 54448
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSLFVRESSGLVKNVSALDSVMLNLGNMSAGIALFTSISPYIPPGGVIWIASLIGLLL CCCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TLPQAYIYIYLSGKIPKTGGDYIWLSRILHGSVGVTMAFALMIESTAYFALVAYFFSSAV HCCHHEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVIGTIGTMDGIKSLVALSSSLTAPIPSYVLGAGIFGIIIAFNIFKAKWGYSLVTISTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ISLVTTIIAMIVIAVNIPDFSTAIVPFLSKEGIMPPPNYSSSVPPPNLLVSLSGILPLLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IFTYPWMQASPAVASETKKVKYVQMGVILPLLVTGILITLGFALMYIAGGYTLTNYLFTN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEEC PSSAFIYTFWTVAMGLTTNQVLQWIIGIGLMTWEFAVLAYGVIVFSRYIFAMAFDRVFPE CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTRLNRFGSPVYTHLFDLGLTLAFLVLPVVSISGATALYGAIVIGMIYFFTVSIAGVLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GIRNKVLSLIIAGLFEAGYFVYLTYESITNPVFGFAESNGLPNPITLGFVIGSFVVGVII HHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YFIARRINLSKGIDLELLYKEIPPD HHHHHHHCCCCCCCHHHHHHCCCCC >Mature Secondary Structure SRSLFVRESSGLVKNVSALDSVMLNLGNMSAGIALFTSISPYIPPGGVIWIASLIGLLL CCCEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH TLPQAYIYIYLSGKIPKTGGDYIWLSRILHGSVGVTMAFALMIESTAYFALVAYFFSSAV HCCHHEEEEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH STVIGTIGTMDGIKSLVALSSSLTAPIPSYVLGAGIFGIIIAFNIFKAKWGYSLVTISTL HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ISLVTTIIAMIVIAVNIPDFSTAIVPFLSKEGIMPPPNYSSSVPPPNLLVSLSGILPLLA HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH IFTYPWMQASPAVASETKKVKYVQMGVILPLLVTGILITLGFALMYIAGGYTLTNYLFTN HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHEEEEC PSSAFIYTFWTVAMGLTTNQVLQWIIGIGLMTWEFAVLAYGVIVFSRYIFAMAFDRVFPE CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IFTRLNRFGSPVYTHLFDLGLTLAFLVLPVVSISGATALYGAIVIGMIYFFTVSIAGVLY HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH GIRNKVLSLIIAGLFEAGYFVYLTYESITNPVFGFAESNGLPNPITLGFVIGSFVVGVII HHHHHHHHHHHHHHHHCCEEEEEEEHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH YFIARRINLSKGIDLELLYKEIPPD HHHHHHHCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA