| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is mngB [H]
Identifier: 15921254
GI number: 15921254
Start: 988978
End: 991833
Strand: Direct
Name: mngB [H]
Synonym: ST1008
Alternate gene names: 15921254
Gene position: 988978-991833 (Clockwise)
Preceding gene: 15921253
Following gene: 15921258
Centisome position: 36.7
GC content: 34.77
Gene sequence:
>2856_bases ATGAGAACTCTAAACGAACTCGAAGCTAGGCTAACGCTTATTTACGGTAATTCTTTCGTAAATGTGAAAAGACTAAACTG GATTAATTTAGAAATCGAGGGAAAGGAAAACTCTTATCTGATAATTTTAGATCATGAAGGTTCTGGTCTCATAAAAATTG ATGGGGAACCTTATTTTGAGCTGGATAAGTATCATGTAATTATTCCTTTACCAGTAGGTAAGCATAAGATAAGTGTTGAG ATGAGTGAGTATAAGGATTTTGGAGAAAAGGTTCATCCATCTCCCGGAATTCCGTATTATGCAGAGCTTGATTTTAATGC ATACAGACTTTACATATACGGAACACAAGTTCTGGATTTGATAAAAAGCGTAGAGGATGAAGAATTAAGAAATGATTTAA TTTACGCACTAACAAAGGCTTTGAAGGAGGCTTATTTTGAGACTATTTCAAATGATCAGTTGTTTATAATCTCTAAACTG GCTAAAACGTCATTAGACCTTAGCAGAATCTATAAAGAGTTGGAATATAGAATGGAGGAAGATAAGAATAGAGAGAAATA TAAGAAAGGACTGGAGGTTTTGAAGGAGGAATTATTGAAACTTAAGGAGAAATATGGTAAAAGAGGTGTTTTAATAGGGA TTGGGCATGCGCATATTGATACAGCTTGGCTTTGGCCATTTGATGAAACTAAAAGAAAGGTTATAAGAACTTTTTCGACT GTTTTAACACTTCTTGATAAGTATAATTTCCGTTTTATCCAGAGTTCTGCCCTTTATTATGAATGGGTTAAGGAAATTTA TCCTGAACTGTTTGAAAAGATAAAGGTGAAAGTGAAAGAGAATAAGTGGGAGCTAGGTGCATTTTATGTTGAATCCGATA CCAACATGATTTCTGGGGAATCATTAGCTAGACAACTACTGTACTCCCAGAGATTTTACTTAGAAAATTTCGATAAAATT GCTAAAATTTTATGGTTACCAGATACCTTTGGTTTTTCTGCCTCTTTACCACAAATTGCTAAGTTAGGCGGTATCGAGCT TTTCGCTACTCATAAAGTTTTCTGGAATGATACTAATAAATTCCCATATAATGTGTTCAAATGGGTTACACCAAATAACG ATTATTTGCCTTCAATAGCTTTTGGAAATGGTAAAGGCGGTTATAATTCTGATTTCTCTGTCTCTAGTGTTTTAGAGCAA TACAAGAACTGGAGGGAAAAGGATCAGCCTGTACTTTACTCTTTTGGTTACGGTGACGGAGGAGGGGGACCAAATGAGGA AATGCTAATTAGGGCTGAAGCTATAGATTTACTTCCAATCCTACCTAGTGTGAAGTTTGAGGAGATAAAGGTTAATCCCA TTGATGAGTGGAAAGGTGAACTGTATTTAGAAACTCATAGGGGTGTCTTTACTTCTCACTCTAAAATGAAGTTACTTAAT AGGAAAGCTGAGGTTAGTCTAAGAGAGGCTGAATTATGGTCTTCTTTAGCTGGCAATTATGATAAGGAAAGGTTTAGGAG ATTATGGAAGATTGTATTGAAGAATCAATTTCATGATGTTCTACCCGGTTCGGCAATTAAAGATGTATATAAGGTGGCAT ATGAAGAGTTAGAAAAAGTGATTGAAGAAGCTGAAAATATTGCAAAGGAGGCAATGCTTAAGCTTCTAGGCTCTCAGGGT GAAGAAATCTATTTGTTTAATTCTCTCAATTGGGATAGGGAGGAATATGTTGAGATTAATGGCAAGTTTTACAAGGTTAA AGTCCCTTCAATAGGTTTCACTGCGTTTAAACCAGAAGAGGTAAAGGAAAAGGTTAATGTAAAAGAGTTTGAAGATTACT ATCAGATCGAAAATAAGTTCTTTGTATTAAAGTTAGGTAAAGAAGGGAAACTACTTTCGCTGTATGATAAGGAAGCTAAG AGAGAAGTATTGAAGGGGCCAAGTAATGTACTTACATTTTATGAAAATATTCCAGGATGGGCAGACGCTTGGGATATTGA GAAAGGTTATGAGGAAACTAATTTTGTGGTTAAGGCAAGTTCTTCAACTGTTATAGAGGATACTGTTGTAAATGTGAAAT ATACGTACAAATTTAGAAACTCAGAGGTTTATCAGATTGTAAGAATTTATCCAGACCATAGAAGAATTGATTTTATTACT ACGTTAAGAATGAGGGATAGAGAGTTACTTTTAAAAGCGTGGTTTAATTTTGACGTTAATACTGATAAAGCGATCTCTGA TATTCCTTTTGGAGTAATTGAAAGGTTTACTTGGCAAAATACTAGTTGGGATATGGCAAGATTTGAAGTTCCTATTCAGA AGTTTGTGGATCTGTCTGAAGGAAATTATGGTGTTGCATTACTAAGTGAGGGTAAGTATGGTGTTTCTTTACGCGGGACT TCGGTAGGTCTAAGTTTGACTAAAACTCCCTTGTACCCAGATCCAACAACAGATCTGGAGGAAGTCACATTTACTTATTC TCTTTACCCACATATAGGTGATTGGCGTAAGGCTGAGGTTATTAAAAGAGCTTATGAATTGAATATCCCGATAAAGATTG TTAGGGGTAAAAGTGCTGAAAAAGAAAAGAGTTTTGTAAAAATTAACAATTTGATTTTAGAGGCTGTTAAGATCGCTGAA GATGATGATAGTTTAATTTTTAGGCTTTATGATGTAGAGAATGTAAGAGATGAGTGCGAAATAGTTTTACCCTTTGAAGT TTTGTCTGCTGAAAGTTTAGATCTTCTTGAGTTAAATAGGGTTCCAAGAGTTGTGAAAGTTGAGAGTAATAAAGTTAGAG TTAGTTTCAAAAATAGGGATATACTAACCTTACGACTACGCTATAAAATAGCTTAA
Upstream 100 bases:
>100_bases TTTAGGATTACGTCAATGTTCGAGTATATGTTCTGGGATATGGCTTATAGGTTAGAAAAGTTCCCATTTGATTTTTAACT TTCTTTTCACAAGTTAGTTT
Downstream 100 bases:
>100_bases ATCTAAGTAAACTGCAATAAGGTACATAGCTAACCAAATGATAGGGATAACATATTTATATAATATTAGGTTTTTTACAC CTTTTGATAAAAGAATAGAA
Product: alpha-mannosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 951; Mature: 951
Protein sequence:
>951_residues MRTLNELEARLTLIYGNSFVNVKRLNWINLEIEGKENSYLIILDHEGSGLIKIDGEPYFELDKYHVIIPLPVGKHKISVE MSEYKDFGEKVHPSPGIPYYAELDFNAYRLYIYGTQVLDLIKSVEDEELRNDLIYALTKALKEAYFETISNDQLFIISKL AKTSLDLSRIYKELEYRMEEDKNREKYKKGLEVLKEELLKLKEKYGKRGVLIGIGHAHIDTAWLWPFDETKRKVIRTFST VLTLLDKYNFRFIQSSALYYEWVKEIYPELFEKIKVKVKENKWELGAFYVESDTNMISGESLARQLLYSQRFYLENFDKI AKILWLPDTFGFSASLPQIAKLGGIELFATHKVFWNDTNKFPYNVFKWVTPNNDYLPSIAFGNGKGGYNSDFSVSSVLEQ YKNWREKDQPVLYSFGYGDGGGGPNEEMLIRAEAIDLLPILPSVKFEEIKVNPIDEWKGELYLETHRGVFTSHSKMKLLN RKAEVSLREAELWSSLAGNYDKERFRRLWKIVLKNQFHDVLPGSAIKDVYKVAYEELEKVIEEAENIAKEAMLKLLGSQG EEIYLFNSLNWDREEYVEINGKFYKVKVPSIGFTAFKPEEVKEKVNVKEFEDYYQIENKFFVLKLGKEGKLLSLYDKEAK REVLKGPSNVLTFYENIPGWADAWDIEKGYEETNFVVKASSSTVIEDTVVNVKYTYKFRNSEVYQIVRIYPDHRRIDFIT TLRMRDRELLLKAWFNFDVNTDKAISDIPFGVIERFTWQNTSWDMARFEVPIQKFVDLSEGNYGVALLSEGKYGVSLRGT SVGLSLTKTPLYPDPTTDLEEVTFTYSLYPHIGDWRKAEVIKRAYELNIPIKIVRGKSAEKEKSFVKINNLILEAVKIAE DDDSLIFRLYDVENVRDECEIVLPFEVLSAESLDLLELNRVPRVVKVESNKVRVSFKNRDILTLRLRYKIA
Sequences:
>Translated_951_residues MRTLNELEARLTLIYGNSFVNVKRLNWINLEIEGKENSYLIILDHEGSGLIKIDGEPYFELDKYHVIIPLPVGKHKISVE MSEYKDFGEKVHPSPGIPYYAELDFNAYRLYIYGTQVLDLIKSVEDEELRNDLIYALTKALKEAYFETISNDQLFIISKL AKTSLDLSRIYKELEYRMEEDKNREKYKKGLEVLKEELLKLKEKYGKRGVLIGIGHAHIDTAWLWPFDETKRKVIRTFST VLTLLDKYNFRFIQSSALYYEWVKEIYPELFEKIKVKVKENKWELGAFYVESDTNMISGESLARQLLYSQRFYLENFDKI AKILWLPDTFGFSASLPQIAKLGGIELFATHKVFWNDTNKFPYNVFKWVTPNNDYLPSIAFGNGKGGYNSDFSVSSVLEQ YKNWREKDQPVLYSFGYGDGGGGPNEEMLIRAEAIDLLPILPSVKFEEIKVNPIDEWKGELYLETHRGVFTSHSKMKLLN RKAEVSLREAELWSSLAGNYDKERFRRLWKIVLKNQFHDVLPGSAIKDVYKVAYEELEKVIEEAENIAKEAMLKLLGSQG EEIYLFNSLNWDREEYVEINGKFYKVKVPSIGFTAFKPEEVKEKVNVKEFEDYYQIENKFFVLKLGKEGKLLSLYDKEAK REVLKGPSNVLTFYENIPGWADAWDIEKGYEETNFVVKASSSTVIEDTVVNVKYTYKFRNSEVYQIVRIYPDHRRIDFIT TLRMRDRELLLKAWFNFDVNTDKAISDIPFGVIERFTWQNTSWDMARFEVPIQKFVDLSEGNYGVALLSEGKYGVSLRGT SVGLSLTKTPLYPDPTTDLEEVTFTYSLYPHIGDWRKAEVIKRAYELNIPIKIVRGKSAEKEKSFVKINNLILEAVKIAE DDDSLIFRLYDVENVRDECEIVLPFEVLSAESLDLLELNRVPRVVKVESNKVRVSFKNRDILTLRLRYKIA >Mature_951_residues MRTLNELEARLTLIYGNSFVNVKRLNWINLEIEGKENSYLIILDHEGSGLIKIDGEPYFELDKYHVIIPLPVGKHKISVE MSEYKDFGEKVHPSPGIPYYAELDFNAYRLYIYGTQVLDLIKSVEDEELRNDLIYALTKALKEAYFETISNDQLFIISKL AKTSLDLSRIYKELEYRMEEDKNREKYKKGLEVLKEELLKLKEKYGKRGVLIGIGHAHIDTAWLWPFDETKRKVIRTFST VLTLLDKYNFRFIQSSALYYEWVKEIYPELFEKIKVKVKENKWELGAFYVESDTNMISGESLARQLLYSQRFYLENFDKI AKILWLPDTFGFSASLPQIAKLGGIELFATHKVFWNDTNKFPYNVFKWVTPNNDYLPSIAFGNGKGGYNSDFSVSSVLEQ YKNWREKDQPVLYSFGYGDGGGGPNEEMLIRAEAIDLLPILPSVKFEEIKVNPIDEWKGELYLETHRGVFTSHSKMKLLN RKAEVSLREAELWSSLAGNYDKERFRRLWKIVLKNQFHDVLPGSAIKDVYKVAYEELEKVIEEAENIAKEAMLKLLGSQG EEIYLFNSLNWDREEYVEINGKFYKVKVPSIGFTAFKPEEVKEKVNVKEFEDYYQIENKFFVLKLGKEGKLLSLYDKEAK REVLKGPSNVLTFYENIPGWADAWDIEKGYEETNFVVKASSSTVIEDTVVNVKYTYKFRNSEVYQIVRIYPDHRRIDFIT TLRMRDRELLLKAWFNFDVNTDKAISDIPFGVIERFTWQNTSWDMARFEVPIQKFVDLSEGNYGVALLSEGKYGVSLRGT SVGLSLTKTPLYPDPTTDLEEVTFTYSLYPHIGDWRKAEVIKRAYELNIPIKIVRGKSAEKEKSFVKINNLILEAVKIAE DDDSLIFRLYDVENVRDECEIVLPFEVLSAESLDLLELNRVPRVVKVESNKVRVSFKNRDILTLRLRYKIA
Specific function: May hydrolyze mannosyl-D-glycerate to mannose-6- phosphate and glycerate [H]
COG id: COG0383
COG function: function code G; Alpha-mannosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 38 family [H]
Homologues:
Organism=Homo sapiens, GI46852164, Length=785, Percent_Identity=34.0127388535032, Blast_Score=345, Evalue=1e-94, Organism=Escherichia coli, GI1786952, Length=404, Percent_Identity=23.7623762376238, Blast_Score=95, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321282, Length=828, Percent_Identity=32.2463768115942, Blast_Score=315, Evalue=3e-86,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR011330 - InterPro: IPR011682 - InterPro: IPR015341 - InterPro: IPR000602 [H]
Pfam domain/function: PF09261 Alpha-mann_mid; PF01074 Glyco_hydro_38; PF07748 Glyco_hydro_38C [H]
EC number: 3.2.1.24
Molecular weight: Translated: 110870; Mature: 110870
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLNELEARLTLIYGNSFVNVKRLNWINLEIEGKENSYLIILDHEGSGLIKIDGEPYFE CCCHHHHCEEEEEEECCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEECCCCCEE LDKYHVIIPLPVGKHKISVEMSEYKDFGEKVHPSPGIPYYAELDFNAYRLYIYGTQVLDL ECCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECHHHHHH IKSVEDEELRNDLIYALTKALKEAYFETISNDQLFIISKLAKTSLDLSRIYKELEYRMEE HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHH DKNREKYKKGLEVLKEELLKLKEKYGKRGVLIGIGHAHIDTAWLWPFDETKRKVIRTFST CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECEEEECCCHHHHHHHHHHHHH VLTLLDKYNFRFIQSSALYYEWVKEIYPELFEKIKVKVKENKWELGAFYVESDTNMISGE HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCEECHH SLARQLLYSQRFYLENFDKIAKILWLPDTFGFSASLPQIAKLGGIELFATHKVFWNDTNK HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCEEEEEEEEEEECCCCC FPYNVFKWVTPNNDYLPSIAFGNGKGGYNSDFSVSSVLEQYKNWREKDQPVLYSFGYGDG CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC GGGPNEEMLIRAEAIDLLPILPSVKFEEIKVNPIDEWKGELYLETHRGVFTSHSKMKLLN CCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCEEECCHHHHHHH RKAEVSLREAELWSSLAGNYDKERFRRLWKIVLKNQFHDVLPGSAIKDVYKVAYEELEKV HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IEEAENIAKEAMLKLLGSQGEEIYLFNSLNWDREEYVEINGKFYKVKVPSIGFTAFKPEE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEEECCEEEEEECCCCCCCCCCHHH VKEKVNVKEFEDYYQIENKFFVLKLGKEGKLLSLYDKEAKREVLKGPSNVLTFYENIPGW HHHHCCHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEHHHHCCCCC ADAWDIEKGYEETNFVVKASSSTVIEDTVVNVKYTYKFRNSEVYQIVRIYPDHRRIDFIT CCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEE TLRMRDRELLLKAWFNFDVNTDKAISDIPFGVIERFTWQNTSWDMARFEVPIQKFVDLSE EEHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHCCCCCCCCHHEEECCHHHHEECCC GNYGVALLSEGKYGVSLRGTSVGLSLTKTPLYPDPTTDLEEVTFTYSLYPHIGDWRKAEV CCEEEEEEECCCEEEEEECCEECEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCHHHHH IKRAYELNIPIKIVRGKSAEKEKSFVKINNLILEAVKIAEDDDSLIFRLYDVENVRDECE HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCE IVLPFEVLSAESLDLLELNRVPRVVKVESNKVRVSFKNRDILTLRLRYKIA EEEEHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEC >Mature Secondary Structure MRTLNELEARLTLIYGNSFVNVKRLNWINLEIEGKENSYLIILDHEGSGLIKIDGEPYFE CCCHHHHCEEEEEEECCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEEEECCCCCEE LDKYHVIIPLPVGKHKISVEMSEYKDFGEKVHPSPGIPYYAELDFNAYRLYIYGTQVLDL ECCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCCCEEEEECCCEEEEEEECHHHHHH IKSVEDEELRNDLIYALTKALKEAYFETISNDQLFIISKLAKTSLDLSRIYKELEYRMEE HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHH DKNREKYKKGLEVLKEELLKLKEKYGKRGVLIGIGHAHIDTAWLWPFDETKRKVIRTFST CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEECEEEECCCHHHHHHHHHHHHH VLTLLDKYNFRFIQSSALYYEWVKEIYPELFEKIKVKVKENKWELGAFYVESDTNMISGE HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEEEEECCCCEECHH SLARQLLYSQRFYLENFDKIAKILWLPDTFGFSASLPQIAKLGGIELFATHKVFWNDTNK HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHCCCEEEEEEEEEEECCCCC FPYNVFKWVTPNNDYLPSIAFGNGKGGYNSDFSVSSVLEQYKNWREKDQPVLYSFGYGDG CCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCC GGGPNEEMLIRAEAIDLLPILPSVKFEEIKVNPIDEWKGELYLETHRGVFTSHSKMKLLN CCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEECCCEEECCHHHHHHH RKAEVSLREAELWSSLAGNYDKERFRRLWKIVLKNQFHDVLPGSAIKDVYKVAYEELEKV HHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH IEEAENIAKEAMLKLLGSQGEEIYLFNSLNWDREEYVEINGKFYKVKVPSIGFTAFKPEE HHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHEEEECCEEEEEECCCCCCCCCCHHH VKEKVNVKEFEDYYQIENKFFVLKLGKEGKLLSLYDKEAKREVLKGPSNVLTFYENIPGW HHHHCCHHHHHHHHHHCCEEEEEEECCCCCEEEEHHHHHHHHHHCCCCCEEHHHHCCCCC ADAWDIEKGYEETNFVVKASSSTVIEDTVVNVKYTYKFRNSEVYQIVRIYPDHRRIDFIT CCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEE TLRMRDRELLLKAWFNFDVNTDKAISDIPFGVIERFTWQNTSWDMARFEVPIQKFVDLSE EEHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHCCCCCCCCHHEEECCHHHHEECCC GNYGVALLSEGKYGVSLRGTSVGLSLTKTPLYPDPTTDLEEVTFTYSLYPHIGDWRKAEV CCEEEEEEECCCEEEEEECCEECEEEECCCCCCCCCCCHHHEEEEEEECCCCCCCHHHHH IKRAYELNIPIKIVRGKSAEKEKSFVKINNLILEAVKIAEDDDSLIFRLYDVENVRDECE HHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCE IVLPFEVLSAESLDLLELNRVPRVVKVESNKVRVSFKNRDILTLRLRYKIA EEEEHHHHCCCCCCHHHHCCCCCEEEEECCEEEEEECCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 9063979 [H]