| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
Click here to switch to the map view.
The map label for this gene is yfbR [C]
Identifier: 15920742
GI number: 15920742
Start: 521893
End: 522432
Strand: Reverse
Name: yfbR [C]
Synonym: ST0525
Alternate gene names: 15920742
Gene position: 522432-521893 (Counterclockwise)
Preceding gene: 15920743
Following gene: 15920741
Centisome position: 19.39
GC content: 32.59
Gene sequence:
>540_bases ATGAGTTTAGAAAGAGTTATTATAGGATGTAAAAATTTAGTTAGAACTGGTTGGATGCAAAGAGGAGTACCGCCATCAAT AGGAGAGACAGTATCCCAGCATAGTTGGGAAGCGGCTGTTTTAGCATATTATCTTGCTAGTAAGCTTAAGGAAAAAGGTG TTAAGATTAATCCTGAAAGAGCATCAGTGATAGCATTATTTCATGACGTTGCTGAGAGTTTGCTAGGAGATTTACCAAAA TGGGCTTCTGAGAGAATAGAAGAAAAGGAGGAAATAGAACTTGAAGCTATTAAAGAACTAGGTCTGGATGTTGAATTATT CATAGAATATAAGGAAATGAAAAGCTTAGAAGGAAAGATTGCAAAATTATGTGATAGATTATCTACATACATGCAAGCAA AGAGATATGCTAAATTAGGTTATGATGTTAGTGAAATAATCAAAACCTACGAAAAGGAAATTGAAAACCTCATGAAGGAT GAGAAATTATCTTTGATTATTAATGAGATAAATAACTTGATAAAGAATATAAATGGCTAA
Upstream 100 bases:
>100_bases AAGCAATGATAAGAATTTGGACAGAAGATATTGATACAATAATTGATACACTAAATTATATATGTAAAAATTTAAGCTGA AGCTTTGAAATTCTTTTCCC
Downstream 100 bases:
>100_bases TGAAATCATCTTTTGAGTGAAAATGAAATTAAGCCCAGGTAAAAAGGCACCAGATGAAGTAAATGTTCTAATAGAGATAC CTTTAGGATCAAATATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase HD Superfamily; Nucleotidase; Metal-Dependent Phosphohydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; HAD Superfamily Hydrolase; Oxetanocin-Like Protein; HD Superfamily Hydrolase; Hydrolase Of HD Superfamily
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPK WASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKD EKLSLIINEINNLIKNING
Sequences:
>Translated_179_residues MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPK WASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKD EKLSLIINEINNLIKNING >Mature_178_residues SLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPKW ASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDE KLSLIINEINNLIKNING
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20431; Mature: 20300
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPER CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH ASVIALFHDVAESLLGDLPKWASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKI HHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDEKLSLIINEINNLIKNING HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPER CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH ASVIALFHDVAESLLGDLPKWASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKI HHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH AKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDEKLSLIINEINNLIKNING HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA