Definition Sulfolobus tokodaii str. 7 chromosome, complete genome.
Accession NC_003106
Length 2,694,756

Click here to switch to the map view.

The map label for this gene is yfbR [C]

Identifier: 15920742

GI number: 15920742

Start: 521893

End: 522432

Strand: Reverse

Name: yfbR [C]

Synonym: ST0525

Alternate gene names: 15920742

Gene position: 522432-521893 (Counterclockwise)

Preceding gene: 15920743

Following gene: 15920741

Centisome position: 19.39

GC content: 32.59

Gene sequence:

>540_bases
ATGAGTTTAGAAAGAGTTATTATAGGATGTAAAAATTTAGTTAGAACTGGTTGGATGCAAAGAGGAGTACCGCCATCAAT
AGGAGAGACAGTATCCCAGCATAGTTGGGAAGCGGCTGTTTTAGCATATTATCTTGCTAGTAAGCTTAAGGAAAAAGGTG
TTAAGATTAATCCTGAAAGAGCATCAGTGATAGCATTATTTCATGACGTTGCTGAGAGTTTGCTAGGAGATTTACCAAAA
TGGGCTTCTGAGAGAATAGAAGAAAAGGAGGAAATAGAACTTGAAGCTATTAAAGAACTAGGTCTGGATGTTGAATTATT
CATAGAATATAAGGAAATGAAAAGCTTAGAAGGAAAGATTGCAAAATTATGTGATAGATTATCTACATACATGCAAGCAA
AGAGATATGCTAAATTAGGTTATGATGTTAGTGAAATAATCAAAACCTACGAAAAGGAAATTGAAAACCTCATGAAGGAT
GAGAAATTATCTTTGATTATTAATGAGATAAATAACTTGATAAAGAATATAAATGGCTAA

Upstream 100 bases:

>100_bases
AAGCAATGATAAGAATTTGGACAGAAGATATTGATACAATAATTGATACACTAAATTATATATGTAAAAATTTAAGCTGA
AGCTTTGAAATTCTTTTCCC

Downstream 100 bases:

>100_bases
TGAAATCATCTTTTGAGTGAAAATGAAATTAAGCCCAGGTAAAAAGGCACCAGATGAAGTAAATGTTCTAATAGAGATAC
CTTTAGGATCAAATATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase HD Superfamily; Nucleotidase; Metal-Dependent Phosphohydrolase; HD Superfamily Metal-Dependent Phosphohydrolase; HAD Superfamily Hydrolase; Oxetanocin-Like Protein; HD Superfamily Hydrolase; Hydrolase Of HD Superfamily

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPK
WASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKD
EKLSLIINEINNLIKNING

Sequences:

>Translated_179_residues
MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPK
WASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKD
EKLSLIINEINNLIKNING
>Mature_178_residues
SLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPERASVIALFHDVAESLLGDLPKW
ASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKIAKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDE
KLSLIINEINNLIKNING

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20431; Mature: 20300

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPER
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH
ASVIALFHDVAESLLGDLPKWASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKI
HHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDEKLSLIINEINNLIKNING
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLERVIIGCKNLVRTGWMQRGVPPSIGETVSQHSWEAAVLAYYLASKLKEKGVKINPER
CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHH
ASVIALFHDVAESLLGDLPKWASERIEEKEEIELEAIKELGLDVELFIEYKEMKSLEGKI
HHHHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AKLCDRLSTYMQAKRYAKLGYDVSEIIKTYEKEIENLMKDEKLSLIINEINNLIKNING
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA