Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410399

Identifier: 41410399

GI number: 41410399

Start: 4770067

End: 4770480

Strand: Reverse

Name: 41410399

Synonym: MAP4301c

Alternate gene names: NA

Gene position: 4770480-4770067 (Counterclockwise)

Preceding gene: 41410400

Following gene: 41410397

Centisome position: 98.77

GC content: 67.87

Gene sequence:

>414_bases
ATGACCACCTTCGAGCGGCCGATGCCCGTCAAAACGCCCACCACCGCGCCGTTTTGGGATGCGCTGGCGCAGCATCGGAT
CGTCATCCAGTACTCGCCGTCGCTGCAGTCCTACGTGTTCTACCCGCGGGTGCGCGCGCCCCGCACCCTGGCCGACGACC
TGGAATGGCGGGAGATCTCCGGGATGGGGTCGCTGTACTCCTACACGGTGGCCCACCGGCCGGTCAGCCCGCACTTCGCC
GACGCGGTGCCGCAGCTGCTGGCCATCGTCGAATGGGACGAGGGCCCAAGGTTTTCCACCGAAATGGTGAACGTCGACCC
GGCCCAGCTGCGGGTCGGGATGCGGGTGCAGCCGGTGTTTTGCGACTACCCCGAGCACGACGTCACGCTGCTGCGCTACC
AGCCCGCGGACTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCAGGTCCCCGACTGCAACCGGGCCTTCGTGTCCGGCAACGGGGGGATCCTGTCCGAGCAGACCACACTCATC
CTCGAGGGAGACTGATCGCA

Downstream 100 bases:

>100_bases
GCTTCAGGTCGACGATCGCACCACCAGACGCGCGATGTCGGTCAGCTCGGGCGAGGGCGGGGCGGCATGCCCCAGCCGCT
CGAAGACCGCCGCCAGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTTFERPMPVKTPTTAPFWDALAQHRIVIQYSPSLQSYVFYPRVRAPRTLADDLEWREISGMGSLYSYTVAHRPVSPHFA
DAVPQLLAIVEWDEGPRFSTEMVNVDPAQLRVGMRVQPVFCDYPEHDVTLLRYQPAD

Sequences:

>Translated_137_residues
MTTFERPMPVKTPTTAPFWDALAQHRIVIQYSPSLQSYVFYPRVRAPRTLADDLEWREISGMGSLYSYTVAHRPVSPHFA
DAVPQLLAIVEWDEGPRFSTEMVNVDPAQLRVGMRVQPVFCDYPEHDVTLLRYQPAD
>Mature_136_residues
TTFERPMPVKTPTTAPFWDALAQHRIVIQYSPSLQSYVFYPRVRAPRTLADDLEWREISGMGSLYSYTVAHRPVSPHFAD
AVPQLLAIVEWDEGPRFSTEMVNVDPAQLRVGMRVQPVFCDYPEHDVTLLRYQPAD

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15752; Mature: 15621

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTFERPMPVKTPTTAPFWDALAQHRIVIQYSPSLQSYVFYPRVRAPRTLADDLEWREIS
CCCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEECC
GMGSLYSYTVAHRPVSPHFADAVPQLLAIVEWDEGPRFSTEMVNVDPAQLRVGMRVQPVF
CCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCHHHEEECCEEEEEE
CDYPEHDVTLLRYQPAD
CCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TTFERPMPVKTPTTAPFWDALAQHRIVIQYSPSLQSYVFYPRVRAPRTLADDLEWREIS
CCCCCCCCCCCCCCCHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCEEECC
GMGSLYSYTVAHRPVSPHFADAVPQLLAIVEWDEGPRFSTEMVNVDPAQLRVGMRVQPVF
CCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCEEEECCCHHHEEECCEEEEEE
CDYPEHDVTLLRYQPAD
CCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA