Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410400

Identifier: 41410400

GI number: 41410400

Start: 4770486

End: 4771694

Strand: Reverse

Name: 41410400

Synonym: MAP4302c

Alternate gene names: NA

Gene position: 4771694-4770486 (Counterclockwise)

Preceding gene: 41410401

Following gene: 41410399

Centisome position: 98.8

GC content: 69.15

Gene sequence:

>1209_bases
ATGGGATTACGCGGGGAAGCCGCGATCGTCGGATATGTGGAGCTGCCGCCGGAGCGGCTCAGCAAGGCCTCGCCGGCGCC
GTTCGTGCTGGAGCAGTGGGCCGAGCCGGGCGCGGCGGCACTGCAGGACGCCGGGCTGCCCGGCGAGGTGGTCAATGGGA
TCGTCGCCTCGCACCTGGCCGAGTCCGAGATCTTCGTGCCCTCCACCATCGCCGAATACCTGGGCGTGGGCGCACGATTC
GCCGAGCACGTCGTCCTGGGCGGGGCCAGCGCCGCGGCCATGGTGTGGCGCGCGGCCGCCGCGATCGAGCTCGGCATCTG
CGACGCCGTGCTGTGCGCACTGCCCGCCCGCTACATCACGCCGTCGTCGAAGAAGAAACCCCGGCCGATGGTCGATGCGA
TGTTCTTCGGCTCGTCGAGCAACCAATACGGTTCTCCGCAAGCCGAATTCGAGATCCCGTACGGTAACCTCGGCCAGAAC
GGCCCGTACGGCCAGGTGGCCCAGCGCTACGCCGCGGTCTACGGCTACGACGAGCGGGCGATGGCCAAGATCGTCGTCGA
CCAGCGGGTCAACGCCAACCACACCGACGGGGCGATCTGGCGGGACACGCCGCTGACCGTCGAGGACGTGCTGGCCAGCC
CGGTCATCGCCGACCCGCTGCACATGCTCGAGATCGTCATGCCCTGTGTCGGCGGGGCCGCCGTCGTGGTCGCCAACGCG
GACCTGGCCAAGCGGGCGCGTCATCGCCCGGTGTGGGTCAAGGGATTCGGCGAACACGTGCCGTTCAAGACCCCGACCTA
CGCCGAGGACCTGCTGCGCACCCCGATCGCCGCGGCCGCCGACACCGCGTTCGCCATGACCGGCCTGAGCCGTGCCCAGA
TGGACATGGTGTCGATCTACGACTGCTACACCATCACGGTGCTGCTGTCGCTGGAAGACGCCGGCTTCTGCGAGAAGGGC
AGGGGCATGGAGTTCGTCGCCGACCATGACCTCACCTTCCGCGGCGACTTCCCACTCAACACCGCCGGCGGCCAATTGGG
TTTCGGCCAAGCGGGTTTGGCCGGCGGCATGCACCACGTCTGCGACGCCACCCGCCAGATCATGGGCCGCGCCGGCGCGG
CGCAGGTCCCCGACTGCAACCGGGCCTTCGTGTCCGGCAACGGGGGGATCCTGTCCGAGCAGACCACACTCATCCTCGAG
GGAGACTGA

Upstream 100 bases:

>100_bases
GCATCTGCCCGCCGAACTGATCGGCGGGGGCACCCGCGAGATCCAGCTCAACATCATCGCGCAGATGATCCTCGGACTAC
CCCGAAAGTAGGTTGCGCAC

Downstream 100 bases:

>100_bases
TCGCAATGACCACCTTCGAGCGGCCGATGCCCGTCAAAACGCCCACCACCGCGCCGTTTTGGGATGCGCTGGCGCAGCAT
CGGATCGTCATCCAGTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARF
AEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQN
GPYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA
DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKG
RGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILE
GD

Sequences:

>Translated_402_residues
MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARF
AEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQN
GPYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA
DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKG
RGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILE
GD
>Mature_401_residues
GLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLAESEIFVPSTIAEYLGVGARFA
EHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYITPSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNG
PYGQVAQRYAAVYGYDERAMAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANAD
LAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIYDCYTITVLLSLEDAGFCEKGR
GMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHVCDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEG
D

Specific function: Unknown

COG id: COG0183

COG function: function code I; Acetyl-CoA acetyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17537653, Length=307, Percent_Identity=24.4299674267101, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI19921506, Length=355, Percent_Identity=23.6619718309859, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24585051, Length=360, Percent_Identity=23.3333333333333, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002155
- InterPro:   IPR016039
- InterPro:   IPR016038
- InterPro:   IPR020617
- InterPro:   IPR020616 [H]

Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]

EC number: NA

Molecular weight: Translated: 42482; Mature: 42351

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLA
CCCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHC
ESEIFVPSTIAEYLGVGARFAEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYIT
CCCCCCHHHHHHHHCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNGPYGQVAQRYAAVYGYDERA
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH
MAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA
HHHHHHHCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC
DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIY
HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
DCYTITVLLSLEDAGFCEKGRGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHV
HHEEEEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCHHHH
CDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEGD
HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCEEEEEECC
>Mature Secondary Structure 
GLRGEAAIVGYVELPPERLSKASPAPFVLEQWAEPGAAALQDAGLPGEVVNGIVASHLA
CCCCCEEEEEEEECCHHHHHCCCCCCHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHC
ESEIFVPSTIAEYLGVGARFAEHVVLGGASAAAMVWRAAAAIELGICDAVLCALPARYIT
CCCCCCHHHHHHHHCCCHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCC
PSSKKKPRPMVDAMFFGSSSNQYGSPQAEFEIPYGNLGQNGPYGQVAQRYAAVYGYDERA
CCCCCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCHHH
MAKIVVDQRVNANHTDGAIWRDTPLTVEDVLASPVIADPLHMLEIVMPCVGGAAVVVANA
HHHHHHHCCCCCCCCCCCEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECC
DLAKRARHRPVWVKGFGEHVPFKTPTYAEDLLRTPIAAAADTAFAMTGLSRAQMDMVSIY
HHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH
DCYTITVLLSLEDAGFCEKGRGMEFVADHDLTFRGDFPLNTAGGQLGFGQAGLAGGMHHV
HHEEEEEEEEECCCCCCCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCHHHCCCHHHH
CDATRQIMGRAGAAQVPDCNRAFVSGNGGILSEQTTLILEGD
HHHHHHHHCCCCCCCCCCCCEEEEECCCCEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]