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The map label for this gene is ubiF [C]

Identifier: 41410369

GI number: 41410369

Start: 4738758

End: 4739957

Strand: Direct

Name: ubiF [C]

Synonym: MAP4271

Alternate gene names: 41410369

Gene position: 4738758-4739957 (Clockwise)

Preceding gene: 41410368

Following gene: 41410372

Centisome position: 98.12

GC content: 66.67

Gene sequence:

>1200_bases
GTGATCCGGACTCAGGTGTGCGTTGCCGGGGGCGGTCCCGCCGGGATGGTGCACGCGCTGCTGCTCGCCCGGGCCGGAAT
CCCGGTCGTCGTCTTGGAAAAGCACAACGACTTCCTGCGCGACTTCCGCGGCGACACCGTGCATCCGACCACGCTGCGGA
TCATGGACGAGCTGGGCCTCATCGACGAGTTCCTGCGCCTGCCGCACACCAAGATCGACACCGTCGCCTTCGACACCGAC
GGCTCGATTCGCACCTTCGGCAACTTCAAAGTGCTCAAGCGGCTCGGTTTCAACCAGCCCTATATCGCCATGATGCCGCA
GTGGGACTTTCTCGACTTCATCGCCGAAAAGGCTTCTGCCTACCCGGAATTCACGCTTATCCGCAACGCCGAAGTGACCG
ACCTGATCCTCGAGGGCGATCGAGTGGCCGGCGTGCGCACCCCCCACGACGAGGTGCGGGCGGATCTGGTGATCGCCGCG
GACGGACGCAAATCCGCGGTGCGGGCCGCCGCGGGGCTGCGGACGGCCCAGGCGCACTCGCCGATGGACGTGCTGTGGTT
CCGGCTGAAATGGCGTCCGGGCGATCCCCGGGAGCTGTTCGGCGTGTTCCGTAAGGGCCTGATGATGGCCATGATCTACC
GCGGCGACTACTGGCAAGTCGCCTATCTGATGCCGAAGGGCGCCAGCCCCAAGGGCGGATCGTTGGAGGAGTTCAAGGAA
CGGATCGTCACCGCGCAGCCGCGGTTGCGCGAACACGTGAACGACCTGACCTCGTGGGACGACACCAGCGAGCTCGACGT
CCGGGTGGACAGGCTCGAAACATGGTGGCGCACCGGCCTTTTGTGCATCGGCGATGCCGCGCACGCCATGTCGCCGGCCG
GCGGCGTCGGGATCAACCTCGCCGTCGCCGACGCGGTGGCCGCCGCCAACATCCTGTGCGCGCCGCTGCAACAGGGCCTG
GTGACCGATCGCGATCTGGCGAAGGTGCAGCGGCGACGCGAACTGCCCACCCGCATCGTGCAGGCCGTCCAGGTCCTGAT
GCAGGACAACGCGATCGCGCCGAACCTGAACGGTGACCTATCCCCGATCCACGTCCCCAAGATCGTGGGATTCGGTCCGC
TGCAAGCCATTCCGCCACTTGTGGTCGGCCGCGGTTTCCGTCCCGAGCATGTCCGCACGCCGGACGTGCACGCACGGTAG

Upstream 100 bases:

>100_bases
GTTCCATGACTCGATGTTCTCGGGCGGGGCTCGTGTAGCTCTGTAGCGGCCGTCGAGGTTGGACGGCCTAGTGGTTGGAC
CCGGGAGGTAGCCTGCGCAA

Downstream 100 bases:

>100_bases
CGCCGTCAGAGCCCAACGATGATGATGACGATGCCCACCACGATGCACACCGAGAGGGACAAGGGCCACCGCCGTGACGC
CCCAGGCGCCGGGCAAGTGG

Product: hypothetical protein

Products: 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MIRTQVCVAGGGPAGMVHALLLARAGIPVVVLEKHNDFLRDFRGDTVHPTTLRIMDELGLIDEFLRLPHTKIDTVAFDTD
GSIRTFGNFKVLKRLGFNQPYIAMMPQWDFLDFIAEKASAYPEFTLIRNAEVTDLILEGDRVAGVRTPHDEVRADLVIAA
DGRKSAVRAAAGLRTAQAHSPMDVLWFRLKWRPGDPRELFGVFRKGLMMAMIYRGDYWQVAYLMPKGASPKGGSLEEFKE
RIVTAQPRLREHVNDLTSWDDTSELDVRVDRLETWWRTGLLCIGDAAHAMSPAGGVGINLAVADAVAAANILCAPLQQGL
VTDRDLAKVQRRRELPTRIVQAVQVLMQDNAIAPNLNGDLSPIHVPKIVGFGPLQAIPPLVVGRGFRPEHVRTPDVHAR

Sequences:

>Translated_399_residues
MIRTQVCVAGGGPAGMVHALLLARAGIPVVVLEKHNDFLRDFRGDTVHPTTLRIMDELGLIDEFLRLPHTKIDTVAFDTD
GSIRTFGNFKVLKRLGFNQPYIAMMPQWDFLDFIAEKASAYPEFTLIRNAEVTDLILEGDRVAGVRTPHDEVRADLVIAA
DGRKSAVRAAAGLRTAQAHSPMDVLWFRLKWRPGDPRELFGVFRKGLMMAMIYRGDYWQVAYLMPKGASPKGGSLEEFKE
RIVTAQPRLREHVNDLTSWDDTSELDVRVDRLETWWRTGLLCIGDAAHAMSPAGGVGINLAVADAVAAANILCAPLQQGL
VTDRDLAKVQRRRELPTRIVQAVQVLMQDNAIAPNLNGDLSPIHVPKIVGFGPLQAIPPLVVGRGFRPEHVRTPDVHAR
>Mature_399_residues
MIRTQVCVAGGGPAGMVHALLLARAGIPVVVLEKHNDFLRDFRGDTVHPTTLRIMDELGLIDEFLRLPHTKIDTVAFDTD
GSIRTFGNFKVLKRLGFNQPYIAMMPQWDFLDFIAEKASAYPEFTLIRNAEVTDLILEGDRVAGVRTPHDEVRADLVIAA
DGRKSAVRAAAGLRTAQAHSPMDVLWFRLKWRPGDPRELFGVFRKGLMMAMIYRGDYWQVAYLMPKGASPKGGSLEEFKE
RIVTAQPRLREHVNDLTSWDDTSELDVRVDRLETWWRTGLLCIGDAAHAMSPAGGVGINLAVADAVAAANILCAPLQQGL
VTDRDLAKVQRRRELPTRIVQAVQVLMQDNAIAPNLNGDLSPIHVPKIVGFGPLQAIPPLVVGRGFRPEHVRTPDVHAR

Specific function: Oxygenase That Introduces The Hydroxyl Group At Carbon Five Of 2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol Resulting In The Formation Of 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol. [C]

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.- [C]

Molecular weight: Translated: 44189; Mature: 44189

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTQVCVAGGGPAGMVHALLLARAGIPVVVLEKHNDFLRDFRGDTVHPTTLRIMDELGL
CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHH
IDEFLRLPHTKIDTVAFDTDGSIRTFGNFKVLKRLGFNQPYIAMMPQWDFLDFIAEKASA
HHHHHHCCCCCCCEEEECCCCCEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCC
YPEFTLIRNAEVTDLILEGDRVAGVRTPHDEVRADLVIAADGRKSAVRAAAGLRTAQAHS
CCCEEEEECCCCEEEEEECCEEECCCCCHHHHCEEEEEEECCCHHHHHHHHCCHHHHCCC
PMDVLWFRLKWRPGDPRELFGVFRKGLMMAMIYRGDYWQVAYLMPKGASPKGGSLEEFKE
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
RIVTAQPRLREHVNDLTSWDDTSELDVRVDRLETWWRTGLLCIGDAAHAMSPAGGVGINL
HHHCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCEEEEECHHHHCCCCCCCEEEE
AVADAVAAANILCAPLQQGLVTDRDLAKVQRRRELPTRIVQAVQVLMQDNAIAPNLNGDL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
SPIHVPKIVGFGPLQAIPPLVVGRGFRPEHVRTPDVHAR
CCEECCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRTQVCVAGGGPAGMVHALLLARAGIPVVVLEKHNDFLRDFRGDTVHPTTLRIMDELGL
CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHH
IDEFLRLPHTKIDTVAFDTDGSIRTFGNFKVLKRLGFNQPYIAMMPQWDFLDFIAEKASA
HHHHHHCCCCCCCEEEECCCCCEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCC
YPEFTLIRNAEVTDLILEGDRVAGVRTPHDEVRADLVIAADGRKSAVRAAAGLRTAQAHS
CCCEEEEECCCCEEEEEECCEEECCCCCHHHHCEEEEEEECCCHHHHHHHHCCHHHHCCC
PMDVLWFRLKWRPGDPRELFGVFRKGLMMAMIYRGDYWQVAYLMPKGASPKGGSLEEFKE
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHH
RIVTAQPRLREHVNDLTSWDDTSELDVRVDRLETWWRTGLLCIGDAAHAMSPAGGVGINL
HHHCCCHHHHHHHHHHCCCCCCCCHHEEHHHHHHHHHCCEEEEECHHHHCCCCCCCEEEE
AVADAVAAANILCAPLQQGLVTDRDLAKVQRRRELPTRIVQAVQVLMQDNAIAPNLNGDL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCC
SPIHVPKIVGFGPLQAIPPLVVGRGFRPEHVRTPDVHAR
CCEECCCCCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! [C]

Specific reaction: @OCTA02.txt*2-Octaprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol! = 2-Octaprenyl-3-Methyl-5-Hydroxy-6-Methoxy-1,4- Benzoquinol [C]

General reaction: Hydroxylation [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA