Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410372

Identifier: 41410372

GI number: 41410372

Start: 4741627

End: 4742457

Strand: Direct

Name: 41410372

Synonym: MAP4274

Alternate gene names: NA

Gene position: 4741627-4742457 (Clockwise)

Preceding gene: 41410369

Following gene: 41410373

Centisome position: 98.17

GC content: 76.9

Gene sequence:

>831_bases
GTGCAGGCCGACGTTGCCGGCTCCGTCGACCGGTTGTTGGCCGAGGCCGCATTCGGCGACCGGCCCGACCGCTGGCCCCT
GCCCGCGGCGGGCACGCCCGCGCAGCTGTGGTTGCGCGCCGTCGCCGCCGGGGGGCAGGGACGTTACGGCGCCGCGCTGC
ACGATCTGGCGCGGCTGCGCCGCACCGCGACCGCCGGGCGGCTCGCCTCGCTGGCGCACAGCACCCAGGGGTCGTTCCTG
CGCCAACTCGGGTGGCACGCGCTGGCGCGGGGCTGGGACGGACGCGCCCTGGCGCTGGCCGGCGACGACCCCGAGGCGGG
CGCCGACGCGCTGATCGGGCTGGCCGCCGATGCCCTGGGCGTCGGCCGCTTCGCGGCCGCGGCGGCGCTGCTGGCCCGCG
TCGAGCCGCTGCTGGACTCGGAAAACATTGTGCCCCAGCGTATTTCGGTGCGCCGCGGTTGGGTGGCCGCCGAGCTCGCG
ATGGCCCGCGGCGACGGCGAACTCGCCGTCCGGCGCGCCGGGGAGGCGGTCGAGGCGGCGGCGGCCACGGCCGCGGGTGC
GGCCGGGGCGGCGGCGCGCCACCGGGTCAAAAGCGAGGTGGTGCTGGCCGCCGCGCTGTGCAGCGCCGGGGATATCGAGC
GGGCCCGCGCGGTCGCCGACACCGCGCTGCACACCACCGCCCGGCTGCGGCTGGTGCCGCTGCGCTGGGCGCTGGCGTGC
TTGCTGATCGATATCGGAAGTGTGGAGTTTTCGTCACGGCAACTGCACGAAATCCGGGAAGTCTGCGCAGGCCAGGTGCG
GCGCGCCGGAGGAACGTGGCGTTCCGCTTGA

Upstream 100 bases:

>100_bases
ATGGGCTATAGTCATTAACGGATCGGTAACAAGAAGATCACAAACTGTTTACTACATCATTGTGATTGAAACTCGTCACA
CTTCGGCGGTCGGGGGCGCG

Downstream 100 bases:

>100_bases
AACGGCCGTCGGCCCGTTATTGTCATTTCGTTAGTTAGCCCGGTTGGCCCGCGATGTGTCCGCTTCGTAACGTTGGAGAT
ATCACCGTCGATGACAATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL
RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA
MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC
LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA

Sequences:

>Translated_276_residues
MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL
RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA
MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC
LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA
>Mature_276_residues
MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL
RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA
MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC
LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28654; Mature: 28654

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RTATAGRLASLAHSTQGSFLRQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELAMARGDGELAVRRAGEAVEAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCHHHHHH
AATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC
HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLR
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH
RTATAGRLASLAHSTQGSFLRQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
VGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELAMARGDGELAVRRAGEAVEAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCHHHHHH
AATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC
HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHH
LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA
HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA