| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410372
Identifier: 41410372
GI number: 41410372
Start: 4741627
End: 4742457
Strand: Direct
Name: 41410372
Synonym: MAP4274
Alternate gene names: NA
Gene position: 4741627-4742457 (Clockwise)
Preceding gene: 41410369
Following gene: 41410373
Centisome position: 98.17
GC content: 76.9
Gene sequence:
>831_bases GTGCAGGCCGACGTTGCCGGCTCCGTCGACCGGTTGTTGGCCGAGGCCGCATTCGGCGACCGGCCCGACCGCTGGCCCCT GCCCGCGGCGGGCACGCCCGCGCAGCTGTGGTTGCGCGCCGTCGCCGCCGGGGGGCAGGGACGTTACGGCGCCGCGCTGC ACGATCTGGCGCGGCTGCGCCGCACCGCGACCGCCGGGCGGCTCGCCTCGCTGGCGCACAGCACCCAGGGGTCGTTCCTG CGCCAACTCGGGTGGCACGCGCTGGCGCGGGGCTGGGACGGACGCGCCCTGGCGCTGGCCGGCGACGACCCCGAGGCGGG CGCCGACGCGCTGATCGGGCTGGCCGCCGATGCCCTGGGCGTCGGCCGCTTCGCGGCCGCGGCGGCGCTGCTGGCCCGCG TCGAGCCGCTGCTGGACTCGGAAAACATTGTGCCCCAGCGTATTTCGGTGCGCCGCGGTTGGGTGGCCGCCGAGCTCGCG ATGGCCCGCGGCGACGGCGAACTCGCCGTCCGGCGCGCCGGGGAGGCGGTCGAGGCGGCGGCGGCCACGGCCGCGGGTGC GGCCGGGGCGGCGGCGCGCCACCGGGTCAAAAGCGAGGTGGTGCTGGCCGCCGCGCTGTGCAGCGCCGGGGATATCGAGC GGGCCCGCGCGGTCGCCGACACCGCGCTGCACACCACCGCCCGGCTGCGGCTGGTGCCGCTGCGCTGGGCGCTGGCGTGC TTGCTGATCGATATCGGAAGTGTGGAGTTTTCGTCACGGCAACTGCACGAAATCCGGGAAGTCTGCGCAGGCCAGGTGCG GCGCGCCGGAGGAACGTGGCGTTCCGCTTGA
Upstream 100 bases:
>100_bases ATGGGCTATAGTCATTAACGGATCGGTAACAAGAAGATCACAAACTGTTTACTACATCATTGTGATTGAAACTCGTCACA CTTCGGCGGTCGGGGGCGCG
Downstream 100 bases:
>100_bases AACGGCCGTCGGCCCGTTATTGTCATTTCGTTAGTTAGCCCGGTTGGCCCGCGATGTGTCCGCTTCGTAACGTTGGAGAT ATCACCGTCGATGACAATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA
Sequences:
>Translated_276_residues MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA >Mature_276_residues MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLRRTATAGRLASLAHSTQGSFL RQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALGVGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELA MARGDGELAVRRAGEAVEAAAATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28654; Mature: 28654
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH RTATAGRLASLAHSTQGSFLRQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH VGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELAMARGDGELAVRRAGEAVEAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCHHHHHH AATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHH LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQADVAGSVDRLLAEAAFGDRPDRWPLPAAGTPAQLWLRAVAAGGQGRYGAALHDLARLR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH RTATAGRLASLAHSTQGSFLRQLGWHALARGWDGRALALAGDDPEAGADALIGLAADALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHH VGRFAAAAALLARVEPLLDSENIVPQRISVRRGWVAAELAMARGDGELAVRRAGEAVEAA HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHCCCCHHHHHHHCHHHHHH AATAAGAAGAAARHRVKSEVVLAAALCSAGDIERARAVADTALHTTARLRLVPLRWALAC HHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEHHHHHHHHH LLIDIGSVEFSSRQLHEIREVCAGQVRRAGGTWRSA HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA