| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410368
Identifier: 41410368
GI number: 41410368
Start: 4738011
End: 4738703
Strand: Direct
Name: 41410368
Synonym: MAP4270
Alternate gene names: NA
Gene position: 4738011-4738703 (Clockwise)
Preceding gene: 41410365
Following gene: 41410369
Centisome position: 98.1
GC content: 61.33
Gene sequence:
>693_bases ATGACGCAGCCAACAGCGGGTTGGTATCCCGATCCATCTAATCCGAGCCGCCAGCGGTACTTCGACGGCACAGCGTGGAC CGAAAGTTATGCGCCATTTCCCGCGCCGCCACCCGGCGTTGGCCAGCCCGTGAAGCCCAGCCGCCAGAAGAAGTCCGATA AGAAGTGGATCCTAGGCGCCGGAGCCGTAGTGGTGGTCCTGATTGCCATCGCCAGCGGCGGCAACGACGGCGACAAGAAG ACCGTCGCGGAGTCGAACACGGCAGCGTCGGTCCCCTCAAGGGCAAGCGCGCCGACGAAGCCAAAGCATGTAGGGCCTGC CGTCGCCCCCGCTGGGTCCCCGGTGCGAGACGGTAAGTTCGAGTTTCAAGTGCTTGGTGTCGATCGCTCGGCCACTAAGG AAGGGGTCTTCAGTTTGCAGCAAGCCAAGGGCGAGTTTTTCGTCGTGAAGCTCCGCGTGACGAACATCGGCGACAAGTCC CAAAGCTTCTCTGCTTCCAACCAAAAACTGATCATCGACGGCAAGAAGTTTGACGCGACGACCTCGCTCAGCGACAACAC CTGGATGGAAGACATCAACCCTGGCCTCGGTATGGATGGGAGCGTCTCGTTCGACATCCCGCCGGGCGCGGTGCCGGAAG CGATAGAGTTCCATGACTCGATGTTCTCGGGCGGGGCTCGTGTAGCTCTGTAG
Upstream 100 bases:
>100_bases AGTTGCATAAGTCGCGACGCGATTCCTCCACGCCTTGTCCGACGCTGCGGTTATGCTGACCCAGCCTGTAGATAGGTCAG CTAAGTAGCAAGGGGACTTC
Downstream 100 bases:
>100_bases CGGCCGTCGAGGTTGGACGGCCTAGTGGTTGGACCCGGGAGGTAGCCTGCGCAAGTGATCCGGACTCAGGTGTGCGTTGC CGGGGGCGGTCCCGCCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTQPTAGWYPDPSNPSRQRYFDGTAWTESYAPFPAPPPGVGQPVKPSRQKKSDKKWILGAGAVVVVLIAIASGGNDGDKK TVAESNTAASVPSRASAPTKPKHVGPAVAPAGSPVRDGKFEFQVLGVDRSATKEGVFSLQQAKGEFFVVKLRVTNIGDKS QSFSASNQKLIIDGKKFDATTSLSDNTWMEDINPGLGMDGSVSFDIPPGAVPEAIEFHDSMFSGGARVAL
Sequences:
>Translated_230_residues MTQPTAGWYPDPSNPSRQRYFDGTAWTESYAPFPAPPPGVGQPVKPSRQKKSDKKWILGAGAVVVVLIAIASGGNDGDKK TVAESNTAASVPSRASAPTKPKHVGPAVAPAGSPVRDGKFEFQVLGVDRSATKEGVFSLQQAKGEFFVVKLRVTNIGDKS QSFSASNQKLIIDGKKFDATTSLSDNTWMEDINPGLGMDGSVSFDIPPGAVPEAIEFHDSMFSGGARVAL >Mature_229_residues TQPTAGWYPDPSNPSRQRYFDGTAWTESYAPFPAPPPGVGQPVKPSRQKKSDKKWILGAGAVVVVLIAIASGGNDGDKKT VAESNTAASVPSRASAPTKPKHVGPAVAPAGSPVRDGKFEFQVLGVDRSATKEGVFSLQQAKGEFFVVKLRVTNIGDKSQ SFSASNQKLIIDGKKFDATTSLSDNTWMEDINPGLGMDGSVSFDIPPGAVPEAIEFHDSMFSGGARVAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24250; Mature: 24119
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPTAGWYPDPSNPSRQRYFDGTAWTESYAPFPAPPPGVGQPVKPSRQKKSDKKWILGA CCCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEC GAVVVVLIAIASGGNDGDKKTVAESNTAASVPSRASAPTKPKHVGPAVAPAGSPVRDGKF CHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE EFQVLGVDRSATKEGVFSLQQAKGEFFVVKLRVTNIGDKSQSFSASNQKLIIDGKKFDAT EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCC TSLSDNTWMEDINPGLGMDGSVSFDIPPGAVPEAIEFHDSMFSGGARVAL CCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECC >Mature Secondary Structure TQPTAGWYPDPSNPSRQRYFDGTAWTESYAPFPAPPPGVGQPVKPSRQKKSDKKWILGA CCCCCCCCCCCCCCCHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEEC GAVVVVLIAIASGGNDGDKKTVAESNTAASVPSRASAPTKPKHVGPAVAPAGSPVRDGKF CHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE EFQVLGVDRSATKEGVFSLQQAKGEFFVVKLRVTNIGDKSQSFSASNQKLIIDGKKFDAT EEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCC TSLSDNTWMEDINPGLGMDGSVSFDIPPGAVPEAIEFHDSMFSGGARVAL CCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA