| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41410324
Identifier: 41410324
GI number: 41410324
Start: 4696343
End: 4697209
Strand: Reverse
Name: 41410324
Synonym: MAP4226c
Alternate gene names: NA
Gene position: 4697209-4696343 (Counterclockwise)
Preceding gene: 41410325
Following gene: 41410323
Centisome position: 97.26
GC content: 71.28
Gene sequence:
>867_bases ATGACTGAGGGAGTTTCGCTCAAGCCCGACCTGGGCCCGTTCGGCGTGTGGCTGTCCACCCGGTCCATCACCGCCGAACT GGCCGCGCGGATCAAATCGCTGGGCTACGGCGCCGCCTGGATCGGCGGATCACCCGACGCCGAGCTGTCCTGGGTGGACC CCGCCCTGGCCGGCACCACCTCGCTGCACCTGGCCACCGGGATCGTCAACATCTGGTCGGCGCCGGCCGCGGCCGTCGCC GAGTCGTTCCACCGGATCGAAAGCGGCCACCCCGGAAGGTTTTTGCTGGGCATCGGGGCCGGCCACCGCGAGCACACCCG GGAATACGTCAAGCCGTACGACGCGGTGGTCTCCTACCTCGACGAGCTCGACGCGGCGGTGATCCCGACCAGCCGGCGGG TGCTGGCCGCGCTGGGACCGCGGATGCTGCGGCTGGCCGCTCAGCGCAGCGCCGGCGCGCACCCCTTCCTGACCACCCCG GAACACACCGCCAAGGCGCGCGAATTGGTGGGCGGCTCGGTCTTTTTGGCGCCCGCGCACAAGGTCGTGCTCACCACCGA CCGGGACCGGGCGCGGGCAGCCGGCCGGCAGGCCATCGAGCACAACCTGGGCCTGAGCAATTACGTGCACAACTGGCTGC GGCTGGGGTTCACCGAGGCCGACGTGCGCCCACCGGGCAGCGACCGGCTGATCGACGCGGTGATCAGCTACGGCACCCCG CAGGCCGTCGCGGCGCGACTGCGCGAGCATCTGGACGCCGGGGCCGACCACGTGGCGATCCAGGTGCTGGGCGGGGATTC CGAGGAGACGCTGCTGCCCGCGCTGACCGAATTGGCCGATGCTCTGGGGCTGACTCGGACGAACTGA
Upstream 100 bases:
>100_bases CCCGTGCAGGTGCTGACCAAGGATGAAAACCTGGTCTCGGCGCTGGCCGAACTGGCGGGGCCGCTCGGACTGAAACCGTC CTGACCACAGGGGGAGCCGG
Downstream 100 bases:
>100_bases CCGATCGGCTCCGTTAGGGTTTGGGTCATGCGGTTACTGGTCACCGGCGGCGCGGGATTCATCGGCGCCAACTTCGTGCA CAGCACCGTTCGCGAGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MTEGVSLKPDLGPFGVWLSTRSITAELAARIKSLGYGAAWIGGSPDAELSWVDPALAGTTSLHLATGIVNIWSAPAAAVA ESFHRIESGHPGRFLLGIGAGHREHTREYVKPYDAVVSYLDELDAAVIPTSRRVLAALGPRMLRLAAQRSAGAHPFLTTP EHTAKARELVGGSVFLAPAHKVVLTTDRDRARAAGRQAIEHNLGLSNYVHNWLRLGFTEADVRPPGSDRLIDAVISYGTP QAVAARLREHLDAGADHVAIQVLGGDSEETLLPALTELADALGLTRTN
Sequences:
>Translated_288_residues MTEGVSLKPDLGPFGVWLSTRSITAELAARIKSLGYGAAWIGGSPDAELSWVDPALAGTTSLHLATGIVNIWSAPAAAVA ESFHRIESGHPGRFLLGIGAGHREHTREYVKPYDAVVSYLDELDAAVIPTSRRVLAALGPRMLRLAAQRSAGAHPFLTTP EHTAKARELVGGSVFLAPAHKVVLTTDRDRARAAGRQAIEHNLGLSNYVHNWLRLGFTEADVRPPGSDRLIDAVISYGTP QAVAARLREHLDAGADHVAIQVLGGDSEETLLPALTELADALGLTRTN >Mature_287_residues TEGVSLKPDLGPFGVWLSTRSITAELAARIKSLGYGAAWIGGSPDAELSWVDPALAGTTSLHLATGIVNIWSAPAAAVAE SFHRIESGHPGRFLLGIGAGHREHTREYVKPYDAVVSYLDELDAAVIPTSRRVLAALGPRMLRLAAQRSAGAHPFLTTPE HTAKARELVGGSVFLAPAHKVVLTTDRDRARAAGRQAIEHNLGLSNYVHNWLRLGFTEADVRPPGSDRLIDAVISYGTPQ AVAARLREHLDAGADHVAIQVLGGDSEETLLPALTELADALGLTRTN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30612; Mature: 30481
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGVSLKPDLGPFGVWLSTRSITAELAARIKSLGYGAAWIGGSPDAELSWVDPALAGTT CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHCCH SLHLATGIVNIWSAPAAAVAESFHRIESGHPGRFLLGIGAGHREHTREYVKPYDAVVSYL HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH DELDAAVIPTSRRVLAALGPRMLRLAAQRSAGAHPFLTTPEHTAKARELVGGSVFLAPAH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCC KVVLTTDRDRARAAGRQAIEHNLGLSNYVHNWLRLGFTEADVRPPGSDRLIDAVISYGTP EEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCH QAVAARLREHLDAGADHVAIQVLGGDSEETLLPALTELADALGLTRTN HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEGVSLKPDLGPFGVWLSTRSITAELAARIKSLGYGAAWIGGSPDAELSWVDPALAGTT CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHCCH SLHLATGIVNIWSAPAAAVAESFHRIESGHPGRFLLGIGAGHREHTREYVKPYDAVVSYL HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH DELDAAVIPTSRRVLAALGPRMLRLAAQRSAGAHPFLTTPEHTAKARELVGGSVFLAPAH HHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEEECCC KVVLTTDRDRARAAGRQAIEHNLGLSNYVHNWLRLGFTEADVRPPGSDRLIDAVISYGTP EEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCH QAVAARLREHLDAGADHVAIQVLGGDSEETLLPALTELADALGLTRTN HHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA