| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410325
Identifier: 41410325
GI number: 41410325
Start: 4697226
End: 4698074
Strand: Reverse
Name: 41410325
Synonym: MAP4227c
Alternate gene names: NA
Gene position: 4698074-4697226 (Counterclockwise)
Preceding gene: 41410334
Following gene: 41410324
Centisome position: 97.27
GC content: 71.61
Gene sequence:
>849_bases ATGACCCAAGCAGCAGGCAAGCCCGATCTCGGCCGGTTCGGATCGTTCGGACGCGGCGTCACACCCCAGCAAGCCAAGGA CATCGAGGCGCTCGGCTACGGCGCCGTCTGGGTGGGCGGTTCCCCGCCCGCCGAGCTGGCCTGGGTGGAGCCCCTTCTGG AGGCGACGACGACGCTGCAGGTGGCCACCGGCATCGTCAACATCTGGACCGCGCCCGCCGGGCCGGTGGCCGAATCCTTC CACCGGATCGAGGCGGCCTACCCGGGCCGCTTCCTGCTGGGCATCGGCGTCGGGCATCCCGAGGCGCACACCGAATACCG CAAGCCCTACGACGCGCTGGCCGACTACCTGACCCGGCTCGACGAGTACGGCGTGCCGGGCGGCCGCCGGGTGGTGGCGG CGCTGGGGCCGCGGGTGCTCAAGCTGTCCGCCGAGCGCTCCGCCGGGGCGCACCCGTACCTGACCACGCCCGAGCACACC GCCCGGGCCCGCGAGCTCATCGGCCCGTCGGCCTTCCTGGCGCCCGAGCACAAGGTGGTGCTGACCACCGACGCGGAGCA CGCCCGGGCGGTCGGCCGCAAGGCGCTCGACATCTACTTCAACCTCGCGAACTACCGAAACAACTGGAAGCGGCTGGGTT TCACCGACGACGAGATCACCCGGCCGGGCAGCGACCGCTTGGTCGACGCGCTGGTGGCATATGGCAGCGTGGACCGGATC GCCGCGCGGCTGCGCGAGCATCTGGACGCCGGCGCCGACCACGTGCCCGTGCAGGTGCTGACCAAGGATGAAAACCTGGT CTCGGCGCTGGCCGAACTGGCGGGGCCGCTCGGACTGAAACCGTCCTGA
Upstream 100 bases:
>100_bases ATACCTGGTTTTCGGCCGCCACCAAAATCCTCCTGACGAGCGCAGACCCCCGGCCGGCGGGGGCCGGAATAGCGGCCCGC GGACGCCGGTTGCCACGACC
Downstream 100 bases:
>100_bases CCACAGGGGGAGCCGGATGACTGAGGGAGTTTCGCTCAAGCCCGACCTGGGCCCGTTCGGCGTGTGGCTGTCCACCCGGT CCATCACCGCCGAACTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTQAAGKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELAWVEPLLEATTTLQVATGIVNIWTAPAGPVAESF HRIEAAYPGRFLLGIGVGHPEAHTEYRKPYDALADYLTRLDEYGVPGGRRVVAALGPRVLKLSAERSAGAHPYLTTPEHT ARARELIGPSAFLAPEHKVVLTTDAEHARAVGRKALDIYFNLANYRNNWKRLGFTDDEITRPGSDRLVDALVAYGSVDRI AARLREHLDAGADHVPVQVLTKDENLVSALAELAGPLGLKPS
Sequences:
>Translated_282_residues MTQAAGKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELAWVEPLLEATTTLQVATGIVNIWTAPAGPVAESF HRIEAAYPGRFLLGIGVGHPEAHTEYRKPYDALADYLTRLDEYGVPGGRRVVAALGPRVLKLSAERSAGAHPYLTTPEHT ARARELIGPSAFLAPEHKVVLTTDAEHARAVGRKALDIYFNLANYRNNWKRLGFTDDEITRPGSDRLVDALVAYGSVDRI AARLREHLDAGADHVPVQVLTKDENLVSALAELAGPLGLKPS >Mature_281_residues TQAAGKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELAWVEPLLEATTTLQVATGIVNIWTAPAGPVAESFH RIEAAYPGRFLLGIGVGHPEAHTEYRKPYDALADYLTRLDEYGVPGGRRVVAALGPRVLKLSAERSAGAHPYLTTPEHTA RARELIGPSAFLAPEHKVVLTTDAEHARAVGRKALDIYFNLANYRNNWKRLGFTDDEITRPGSDRLVDALVAYGSVDRIA ARLREHLDAGADHVPVQVLTKDENLVSALAELAGPLGLKPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30280; Mature: 30148
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAAGKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELAWVEPLLEATTTLQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH VATGIVNIWTAPAGPVAESFHRIEAAYPGRFLLGIGVGHPEAHTEYRKPYDALADYLTRL HHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHH DEYGVPGGRRVVAALGPRVLKLSAERSAGAHPYLTTPEHTARARELIGPSAFLAPEHKVV HHCCCCCCCEEHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEE LTTDAEHARAVGRKALDIYFNLANYRNNWKRLGFTDDEITRPGSDRLVDALVAYGSVDRI EEECHHHHHHHHHHHHHHEEEHHHHCCCHHCCCCCCHHHCCCCHHHHHHHHHHHCCHHHH AARLREHLDAGADHVPVQVLTKDENLVSALAELAGPLGLKPS HHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TQAAGKPDLGRFGSFGRGVTPQQAKDIEALGYGAVWVGGSPPAELAWVEPLLEATTTLQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHH VATGIVNIWTAPAGPVAESFHRIEAAYPGRFLLGIGVGHPEAHTEYRKPYDALADYLTRL HHHHHHHEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHH DEYGVPGGRRVVAALGPRVLKLSAERSAGAHPYLTTPEHTARARELIGPSAFLAPEHKVV HHCCCCCCCEEHHHHCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCEEE LTTDAEHARAVGRKALDIYFNLANYRNNWKRLGFTDDEITRPGSDRLVDALVAYGSVDRI EEECHHHHHHHHHHHHHHEEEHHHHCCCHHCCCCCCHHHCCCCHHHHHHHHHHHCCHHHH AARLREHLDAGADHVPVQVLTKDENLVSALAELAGPLGLKPS HHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA