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The map label for this gene is yfmJ [H]

Identifier: 41409901

GI number: 41409901

Start: 4250098

End: 4251117

Strand: Direct

Name: yfmJ [H]

Synonym: MAP3803

Alternate gene names: 41409901

Gene position: 4250098-4251117 (Clockwise)

Preceding gene: 41409899

Following gene: 41409902

Centisome position: 88.0

GC content: 70.1

Gene sequence:

>1020_bases
GTGCCCGATTTGCCGAACCGCCAGATCCTGCTGCGTCGCCGCCCCTCCGGACTGGTCCGGCCGGACGACACCGAACTGGT
CACCACCCCCGCGCCGGAACCCGCCGAGGGGGAGGCGCTGCTGCGGACCACCTACGTCGGCATCGACGCCGCGGCCCGCA
CCTGGCTCGACGACCAGCCCAGCTACCTGCCGCCGGTGCAGTTGGGTGAGGTCATTCGCGCGGCCGGGATCGGCGAGGTG
GTGGCCTCGCGCTGTGACGCGTTCGCCGTCGGCGACGTGGTCACCACGCTGACCGGATTCCAGGAGTACGCGATCATCCG
CGACGACCTGTTCAGCACGCCGATTCCCGGCGAGCACGACCAGCTGGCGATCATGTCGGTGTACGGACCGACCGGCGCCA
CCGCCTATTTCGGGATGACCGACATCGGCCGCCCGCAGCCCGGCGAGACGGTGGTGGTGTCGGCGGCCGCGGGCGCCACC
GGGTCGATCGCCGGGCAGATCGCCAAGATCGCCGGCGCCCGGGTGGTGGGCATCGCCGGAGGACCGGAGAAATGCCGTGC
GGTGGTGGCGGACTTCGGGTTCGACGCGTGCATCGACTACAAGAACGACGACGTCGCGGCGGCGCTCAAACAGCACTGCC
CGCGCCGCGTCGACGTCTACTTCGACAACGTGGGCGGGCCCATCCTGGACGCCGTGCTGGGACGGCTGGCCCCCCAAGCC
CGGGTGGTGCTGTGCGGCGTCATCTCCAGCTACCTGACCGGGGACCATCCCGGCCCGGCCAACTACGTGAACCTGCTGTC
CAAGACCGCGCTGATGCAGGGGTTCAACGCGCTCGACCAGTGGGGCCGCTTCGACGAGGCGTTCGCCGCGCTGCGGAAGT
GGGAGGCCGAGGGCCGACTTCACCACCGGCAGACCATCTTTGAGGGCATCGAATCCTGCGTCGACGCCCTCAACGGGCTG
TTCACCGGCGTCAACATCGGCAAGACGCTGGTCAAGCTCAGCGAACCCGGCGCCGGCTGA

Upstream 100 bases:

>100_bases
CGAGTTCCCGGATCCGCTCCTCCGGGTCGTCGTTTGCTGCCATGGATTGAATATGCCATTCCCTTCTGCGGTTTCGGCCC
GTTCGGTAGTTTTTAGGACC

Downstream 100 bases:

>100_bases
CCGGGCGCGGGATGCGGCCCAACCCCGGCGCGTGGTTTCATAACACCGTTTGCGAGAGTTGCTTGGGGAGATCGCGCCGC
GCATGACGGGCCGGCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MPDLPNRQILLRRRPSGLVRPDDTELVTTPAPEPAEGEALLRTTYVGIDAAARTWLDDQPSYLPPVQLGEVIRAAGIGEV
VASRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIPGEHDQLAIMSVYGPTGATAYFGMTDIGRPQPGETVVVSAAAGAT
GSIAGQIAKIAGARVVGIAGGPEKCRAVVADFGFDACIDYKNDDVAAALKQHCPRRVDVYFDNVGGPILDAVLGRLAPQA
RVVLCGVISSYLTGDHPGPANYVNLLSKTALMQGFNALDQWGRFDEAFAALRKWEAEGRLHHRQTIFEGIESCVDALNGL
FTGVNIGKTLVKLSEPGAG

Sequences:

>Translated_339_residues
MPDLPNRQILLRRRPSGLVRPDDTELVTTPAPEPAEGEALLRTTYVGIDAAARTWLDDQPSYLPPVQLGEVIRAAGIGEV
VASRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIPGEHDQLAIMSVYGPTGATAYFGMTDIGRPQPGETVVVSAAAGAT
GSIAGQIAKIAGARVVGIAGGPEKCRAVVADFGFDACIDYKNDDVAAALKQHCPRRVDVYFDNVGGPILDAVLGRLAPQA
RVVLCGVISSYLTGDHPGPANYVNLLSKTALMQGFNALDQWGRFDEAFAALRKWEAEGRLHHRQTIFEGIESCVDALNGL
FTGVNIGKTLVKLSEPGAG
>Mature_338_residues
PDLPNRQILLRRRPSGLVRPDDTELVTTPAPEPAEGEALLRTTYVGIDAAARTWLDDQPSYLPPVQLGEVIRAAGIGEVV
ASRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIPGEHDQLAIMSVYGPTGATAYFGMTDIGRPQPGETVVVSAAAGATG
SIAGQIAKIAGARVVGIAGGPEKCRAVVADFGFDACIDYKNDDVAAALKQHCPRRVDVYFDNVGGPILDAVLGRLAPQAR
VVLCGVISSYLTGDHPGPANYVNLLSKTALMQGFNALDQWGRFDEAFAALRKWEAEGRLHHRQTIFEGIESCVDALNGLF
TGVNIGKTLVKLSEPGAG

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=313, Percent_Identity=35.7827476038339, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI226246680, Length=313, Percent_Identity=35.7827476038339, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI22748929, Length=313, Percent_Identity=35.7827476038339, Blast_Score=175, Evalue=5e-44,
Organism=Homo sapiens, GI226059159, Length=328, Percent_Identity=31.7073170731707, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI226059133, Length=328, Percent_Identity=31.7073170731707, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI28557745, Length=338, Percent_Identity=32.5443786982249, Blast_Score=142, Evalue=5e-34,
Organism=Homo sapiens, GI226056130, Length=245, Percent_Identity=32.6530612244898, Blast_Score=121, Evalue=8e-28,
Organism=Escherichia coli, GI226510941, Length=338, Percent_Identity=39.3491124260355, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI1790485, Length=242, Percent_Identity=30.5785123966942, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI133901712, Length=355, Percent_Identity=32.112676056338, Blast_Score=159, Evalue=2e-39,
Organism=Caenorhabditis elegans, GI133901710, Length=355, Percent_Identity=32.112676056338, Blast_Score=159, Evalue=2e-39,
Organism=Saccharomyces cerevisiae, GI6323504, Length=326, Percent_Identity=31.9018404907975, Blast_Score=129, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35930; Mature: 35799

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDLPNRQILLRRRPSGLVRPDDTELVTTPAPEPAEGEALLRTTYVGIDAAARTWLDDQP
CCCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECHHHHHHHCCCCCC
SYLPPVQLGEVIRAAGIGEVVASRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIPGEHD
CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLAIMSVYGPTGATAYFGMTDIGRPQPGETVVVSAAAGATGSIAGQIAKIAGARVVGIAG
CEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECC
GPEKCRAVVADFGFDACIDYKNDDVAAALKQHCPRRVDVYFDNVGGPILDAVLGRLAPQA
CHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHH
RVVLCGVISSYLTGDHPGPANYVNLLSKTALMQGFNALDQWGRFDEAFAALRKWEAEGRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
HHRQTIFEGIESCVDALNGLFTGVNIGKTLVKLSEPGAG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCC
>Mature Secondary Structure 
PDLPNRQILLRRRPSGLVRPDDTELVTTPAPEPAEGEALLRTTYVGIDAAARTWLDDQP
CCCCCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEECHHHHHHHCCCCCC
SYLPPVQLGEVIRAAGIGEVVASRCDAFAVGDVVTTLTGFQEYAIIRDDLFSTPIPGEHD
CCCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
QLAIMSVYGPTGATAYFGMTDIGRPQPGETVVVSAAAGATGSIAGQIAKIAGARVVGIAG
CEEEEEEECCCCCEEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEECC
GPEKCRAVVADFGFDACIDYKNDDVAAALKQHCPRRVDVYFDNVGGPILDAVLGRLAPQA
CHHHHHHHHHHCCCHHEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCHH
RVVLCGVISSYLTGDHPGPANYVNLLSKTALMQGFNALDQWGRFDEAFAALRKWEAEGRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
HHRQTIFEGIESCVDALNGLFTGVNIGKTLVKLSEPGAG
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]