Click here to switch to the map view.

The map label for this gene is 41409902

Identifier: 41409902

GI number: 41409902

Start: 4251236

End: 4252057

Strand: Direct

Name: 41409902

Synonym: MAP3804

Alternate gene names: NA

Gene position: 4251236-4252057 (Clockwise)

Preceding gene: 41409901

Following gene: 41409904

Centisome position: 88.02

GC content: 67.52

Gene sequence:

>822_bases
ATGGATCGTCGCAGCATGATGTTGATGTCGGGAATCGGCATGCTGGGAGCTGCGATGCGCCTGCCCGGCGCCTGGGCCAC
CCCGCCGGCGCCCGAAGCGCCGCCGTCGGCCGGGGGCGGGCCCTACATCTTCGCCGACGAGTTCGACGGTCCCGCCGGCT
CGCCGCCCGATCCGGGCAAGTGGACCATCCAGACCTGGCAGGACGACGTGTTCCCGCCGGTGGCCGGGATCTACCGCGAC
GACCGCCGAAACGTGTTCCAGGACGGCAATTCCAACCTGGTGTTGTGCGCCACCCAGGAGATGGGCACCTACTACAGCGG
CAAGCTGCGCGGCAACTTCCGCAGCATGATCAACCAGACCTGGGAGGCGCGGATCAAGCTGGACTGCCTGTTCCCCGGGC
TGTGGCCGTCGTTCTGGGGAGTCAACGAGGACCCGCTGCCCGACGGCGAGGTGGACATCTTCGAGTGGTACGGCAACGGC
CAGTGGCCCCCGGGCACCACCGTGCACGCCGCCTCCAACGGCAAGACGTGGGAAGGCAAATCGATTCCCGGTCTGGTCGA
CGGCAACTGGCACACCTGGCGAATGCATTGGGGCGAAGAGGGATTCGAGTTCTCCCGGGACGGGGCCGAGTACTTCAAGG
TGCCCAACAAGCCCATCCACGTCGCCGGCGGCGCGCCCGACGACTTCCGTTGGCCGTTCAACAACCCCGGCTACTGGATG
ACGCCGATGTTCACCCTCGCCGTCGGCGGAGTGGGCGCCGGTGACCCCGCGGCGGGCGTGTTCCCGTCGTCGATGCTGAT
CGACTACATCCGCATCTGGTAG

Upstream 100 bases:

>100_bases
CCAACCCCGGCGCGTGGTTTCATAACACCGTTTGCGAGAGTTGCTTGGGGAGATCGCGCCGCGCATGACGGGCCGGCATC
GAACGATTGGTGGTTACTAG

Downstream 100 bases:

>100_bases
CGCTCACTTCGTGGCCTCGAACACCTGAACCAGGTTGAACTGCCAGCGCTCGACCAGCCGGAAGCCCAGGTCGTGCGGCA
CCGCGAAGGCGGGTGTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Secreted Protein; Beta-Glucanase; Licheninase; Glycoside Hydrolase Family; Endo-1 3-Beta-Glucanase; Glycosyl Hydrolases Family Protein

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MDRRSMMLMSGIGMLGAAMRLPGAWATPPAPEAPPSAGGGPYIFADEFDGPAGSPPDPGKWTIQTWQDDVFPPVAGIYRD
DRRNVFQDGNSNLVLCATQEMGTYYSGKLRGNFRSMINQTWEARIKLDCLFPGLWPSFWGVNEDPLPDGEVDIFEWYGNG
QWPPGTTVHAASNGKTWEGKSIPGLVDGNWHTWRMHWGEEGFEFSRDGAEYFKVPNKPIHVAGGAPDDFRWPFNNPGYWM
TPMFTLAVGGVGAGDPAAGVFPSSMLIDYIRIW

Sequences:

>Translated_273_residues
MDRRSMMLMSGIGMLGAAMRLPGAWATPPAPEAPPSAGGGPYIFADEFDGPAGSPPDPGKWTIQTWQDDVFPPVAGIYRD
DRRNVFQDGNSNLVLCATQEMGTYYSGKLRGNFRSMINQTWEARIKLDCLFPGLWPSFWGVNEDPLPDGEVDIFEWYGNG
QWPPGTTVHAASNGKTWEGKSIPGLVDGNWHTWRMHWGEEGFEFSRDGAEYFKVPNKPIHVAGGAPDDFRWPFNNPGYWM
TPMFTLAVGGVGAGDPAAGVFPSSMLIDYIRIW
>Mature_273_residues
MDRRSMMLMSGIGMLGAAMRLPGAWATPPAPEAPPSAGGGPYIFADEFDGPAGSPPDPGKWTIQTWQDDVFPPVAGIYRD
DRRNVFQDGNSNLVLCATQEMGTYYSGKLRGNFRSMINQTWEARIKLDCLFPGLWPSFWGVNEDPLPDGEVDIFEWYGNG
QWPPGTTVHAASNGKTWEGKSIPGLVDGNWHTWRMHWGEEGFEFSRDGAEYFKVPNKPIHVAGGAPDDFRWPFNNPGYWM
TPMFTLAVGGVGAGDPAAGVFPSSMLIDYIRIW

Specific function: Unknown

COG id: COG2273

COG function: function code G; Beta-glucanase/Beta-glucan synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30184; Mature: 30184

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRSMMLMSGIGMLGAAMRLPGAWATPPAPEAPPSAGGGPYIFADEFDGPAGSPPDPGK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
WTIQTWQDDVFPPVAGIYRDDRRNVFQDGNSNLVLCATQEMGTYYSGKLRGNFRSMINQT
EEEEECCCCCCCCHHHHHCCCCHHHHHCCCCCEEEEEECCCCCEECCEECCHHHHHHHHC
WEARIKLDCLFPGLWPSFWGVNEDPLPDGEVDIFEWYGNGQWPPGTTVHAASNGKTWEGK
CEEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC
SIPGLVDGNWHTWRMHWGEEGFEFSRDGAEYFKVPNKPIHVAGGAPDDFRWPFNNPGYWM
CCCEEECCCEEEEEEECCCCCCEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEH
TPMFTLAVGGVGAGDPAAGVFPSSMLIDYIRIW
HHHEEEHCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDRRSMMLMSGIGMLGAAMRLPGAWATPPAPEAPPSAGGGPYIFADEFDGPAGSPPDPGK
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
WTIQTWQDDVFPPVAGIYRDDRRNVFQDGNSNLVLCATQEMGTYYSGKLRGNFRSMINQT
EEEEECCCCCCCCHHHHHCCCCHHHHHCCCCCEEEEEECCCCCEECCEECCHHHHHHHHC
WEARIKLDCLFPGLWPSFWGVNEDPLPDGEVDIFEWYGNGQWPPGTTVHAASNGKTWEGK
CEEEEEEEEECCCCCHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCC
SIPGLVDGNWHTWRMHWGEEGFEFSRDGAEYFKVPNKPIHVAGGAPDDFRWPFNNPGYWM
CCCEEECCCEEEEEEECCCCCCEECCCCHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEH
TPMFTLAVGGVGAGDPAAGVFPSSMLIDYIRIW
HHHEEEHCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA