Click here to switch to the map view.

The map label for this gene is 41409899

Identifier: 41409899

GI number: 41409899

Start: 4247456

End: 4248922

Strand: Direct

Name: 41409899

Synonym: MAP3801

Alternate gene names: NA

Gene position: 4247456-4248922 (Clockwise)

Preceding gene: 41409898

Following gene: 41409901

Centisome position: 87.94

GC content: 75.66

Gene sequence:

>1467_bases
ATGCGGGATTTACCCGCCATGCCCTCGCCCGGCCCGGTCCGGGTCGCGCGGGGCAGTGCAAGACCTTGGAGGCGTTACGT
GGACATCGTGCTTGGGGTGTCGATGGCTCCCGGGACGGTCCGCCTGGTAGCGATCGAAGGACAGAATGCCGACGGCGTGA
CCGTCGAACAGGAAGAGTTCGCGGTCGGAGCCGCTGAGAATTCGGCGAATTCGGCGGCCGACCAGGTGATCGACGCGATC
ATCGGCACCCGCGAGGGAGTTTTCGAGGGCGGCCACCGGCTGACCTCGACGGGGGTTACCTGGACCGACCCCACCGGGGC
CGCGGCGTTGCGGGATGCGATCGCCTCCCACGAGCTGGGCAACGTGATGTTGGTCTCGCCGCTGCTGGCCGCGGCCGCGC
TGGCGCAGACGGTCGGGTATGCGCTCGGCTACGGGCACATCGGGATGCTGTTCGTCGAGCCGCGCAGCGCGACGCTGGCG
GTCGTCGACGTGAGCGACGGTTCGATCGTCGATCTGCACCGCCACCAGATCCCGCACGGCCCCGGCGCGCCGGTGGCGGC
CGAGCTGGCGGCGATGGTCGCCGGCCTGGATGCGCGCGACACCCGCGCCGACGGCGTGTTCGTGGTCGGCTGCGGAACCG
ACATCGTCGCGGTGAAACCGGCGCTGGAGGCGGCCAGCCCCGTTCCGGTCACCGGCCCCGAGGAGCCGGACATGGCGCTG
GCCCGCGGCGCGGCCCTGGCCTCGGCGAACGCGCCGCTGTTCGCGTCGTCGACGGCGGCGCTGGCCTACGCGCTGGACCC
GGGCACCGGGGAGATGGATCCACCCGCGTTCAACCCCACCTATCTGGATGTGTGGGGCGACACCGGTGCGGGCACCGGCG
TGCGCGCCTACAGCGCCGTCCCCGACGAGGAGGAGCCGGCCCCGCGCCGGCCGTGGTCGATGCTGCTGGCCGGCGGCGCG
CTGGCCGGCATCGCCGCGGTGATCGGCGGCGTGGTGCTGGTGACGCTGACCTCGGACGGTCACGGCTCGAACACCCGGCA
CAACCAGGGCGTCAGCGTCGCCACCCCGGGGATCCAGCTGCCGGCGCCGCCGCCGAGCAACCCGCCGGCGGCGCAGCCGC
CCGCGCCGAGCACGCCCGCCCCCGCCCCGACCCCCACCGAGGTGGCCGCCCCGGCGCCGGAGCCCGTCCAGCAGGCGGCG
CCGCAGACCCCGGTCACCACCGCACCCCCGGCGCCGGTCTACCGCGCCCCGGCCCGGCCCACACCGCAGTACCAGCCGCG
GCCCGTCGAGCAGCCGGCGCCGCCGCCGGCCGCCGCGCCCGCCCCGGCCGCCCCACCTCCGGTGCCCGCGCCGCCGCCGG
CCGCCCCGCCGGTGCCCCACCAGCCACCGGTGACGATGTACCTGCACTTCCCGTTCGTCACGGTGCCGATCCCGATCACC
CCGCCGGCGCCGCCGCCCGGCCCATAG

Upstream 100 bases:

>100_bases
CCAAAACCCCTACTACGGCCCGGGGTATTAGCGTCCGTCCTGCTCAGGCAGTCCATCTGCGCGCCGAGTCGCGCGCGGGT
AGCGTGGTGTCACCAAGTTC

Downstream 100 bases:

>100_bases
CACCTGGCACACCCGGCCGGCCGGGCGCACACTGGCAGGTACGGCACGAGCGGCAAGGAGGTCGCGTGGGCGAGCAGGGT
GGGTTCGGATTCTACCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MRDLPAMPSPGPVRVARGSARPWRRYVDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAVGAAENSANSAADQVIDAI
IGTREGVFEGGHRLTSTGVTWTDPTGAAALRDAIASHELGNVMLVSPLLAAAALAQTVGYALGYGHIGMLFVEPRSATLA
VVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDTRADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMAL
ARGAALASANAPLFASSTAALAYALDPGTGEMDPPAFNPTYLDVWGDTGAGTGVRAYSAVPDEEEPAPRRPWSMLLAGGA
LAGIAAVIGGVVLVTLTSDGHGSNTRHNQGVSVATPGIQLPAPPPSNPPAAQPPAPSTPAPAPTPTEVAAPAPEPVQQAA
PQTPVTTAPPAPVYRAPARPTPQYQPRPVEQPAPPPAAAPAPAAPPPVPAPPPAAPPVPHQPPVTMYLHFPFVTVPIPIT
PPAPPPGP

Sequences:

>Translated_488_residues
MRDLPAMPSPGPVRVARGSARPWRRYVDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAVGAAENSANSAADQVIDAI
IGTREGVFEGGHRLTSTGVTWTDPTGAAALRDAIASHELGNVMLVSPLLAAAALAQTVGYALGYGHIGMLFVEPRSATLA
VVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDTRADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMAL
ARGAALASANAPLFASSTAALAYALDPGTGEMDPPAFNPTYLDVWGDTGAGTGVRAYSAVPDEEEPAPRRPWSMLLAGGA
LAGIAAVIGGVVLVTLTSDGHGSNTRHNQGVSVATPGIQLPAPPPSNPPAAQPPAPSTPAPAPTPTEVAAPAPEPVQQAA
PQTPVTTAPPAPVYRAPARPTPQYQPRPVEQPAPPPAAAPAPAAPPPVPAPPPAAPPVPHQPPVTMYLHFPFVTVPIPIT
PPAPPPGP
>Mature_488_residues
MRDLPAMPSPGPVRVARGSARPWRRYVDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEFAVGAAENSANSAADQVIDAI
IGTREGVFEGGHRLTSTGVTWTDPTGAAALRDAIASHELGNVMLVSPLLAAAALAQTVGYALGYGHIGMLFVEPRSATLA
VVDVSDGSIVDLHRHQIPHGPGAPVAAELAAMVAGLDARDTRADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMAL
ARGAALASANAPLFASSTAALAYALDPGTGEMDPPAFNPTYLDVWGDTGAGTGVRAYSAVPDEEEPAPRRPWSMLLAGGA
LAGIAAVIGGVVLVTLTSDGHGSNTRHNQGVSVATPGIQLPAPPPSNPPAAQPPAPSTPAPAPTPTEVAAPAPEPVQQAA
PQTPVTTAPPAPVYRAPARPTPQYQPRPVEQPAPPPAAAPAPAAPPPVPAPPPAAPPVPHQPPVTMYLHFPFVTVPIPIT
PPAPPPGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49215; Mature: 49215

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLPAMPSPGPVRVARGSARPWRRYVDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEF
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCEEEHHHH
AVGAAENSANSAADQVIDAIIGTREGVFEGGHRLTSTGVTWTDPTGAAALRDAIASHELG
EEECCCCCCHHHHHHHHHHHHCCCCCHHCCCCEEEECCCEEECCCCHHHHHHHHHHHCCC
NVMLVSPLLAAAALAQTVGYALGYGHIGMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHG
CEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEHHHHCCCCC
PGAPVAAELAAMVAGLDARDTRADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMAL
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCCCCCCCCCHHH
ARGAALASANAPLFASSTAALAYALDPGTGEMDPPAFNPTYLDVWGDTGAGTGVRAYSAV
HHCHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCC
PDEEEPAPRRPWSMLLAGGALAGIAAVIGGVVLVTLTSDGHGSNTRHNQGVSVATPGIQL
CCCCCCCCCCCHHHHHHCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEECCCEEC
PAPPPSNPPAAQPPAPSTPAPAPTPTEVAAPAPEPVQQAAPQTPVTTAPPAPVYRAPARP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCC
TPQYQPRPVEQPAPPPAAAPAPAAPPPVPAPPPAAPPVPHQPPVTMYLHFPFVTVPIPIT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC
PPAPPPGP
CCCCCCCC
>Mature Secondary Structure
MRDLPAMPSPGPVRVARGSARPWRRYVDIVLGVSMAPGTVRLVAIEGQNADGVTVEQEEF
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCEECCCEEEEEEEECCCCCCCEEEHHHH
AVGAAENSANSAADQVIDAIIGTREGVFEGGHRLTSTGVTWTDPTGAAALRDAIASHELG
EEECCCCCCHHHHHHHHHHHHCCCCCHHCCCCEEEECCCEEECCCCHHHHHHHHHHHCCC
NVMLVSPLLAAAALAQTVGYALGYGHIGMLFVEPRSATLAVVDVSDGSIVDLHRHQIPHG
CEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEHHHHCCCCC
PGAPVAAELAAMVAGLDARDTRADGVFVVGCGTDIVAVKPALEAASPVPVTGPEEPDMAL
CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEECCHHHCCCCCCCCCCCCCCHHH
ARGAALASANAPLFASSTAALAYALDPGTGEMDPPAFNPTYLDVWGDTGAGTGVRAYSAV
HHCHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCC
PDEEEPAPRRPWSMLLAGGALAGIAAVIGGVVLVTLTSDGHGSNTRHNQGVSVATPGIQL
CCCCCCCCCCCHHHHHHCHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEECCCEEC
PAPPPSNPPAAQPPAPSTPAPAPTPTEVAAPAPEPVQQAAPQTPVTTAPPAPVYRAPARP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEECCCCC
TPQYQPRPVEQPAPPPAAAPAPAAPPPVPAPPPAAPPVPHQPPVTMYLHFPFVTVPIPIT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEECC
PPAPPPGP
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA