Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41409752

Identifier: 41409752

GI number: 41409752

Start: 4058366

End: 4059628

Strand: Direct

Name: 41409752

Synonym: MAP3654

Alternate gene names: NA

Gene position: 4058366-4059628 (Clockwise)

Preceding gene: 41409751

Following gene: 41409754

Centisome position: 84.03

GC content: 73.79

Gene sequence:

>1263_bases
GTGGGCGCGCGGATCGAGGAGGTGGCGCCCGCGGATGATGGCCTGGCGGCCAGGGCGGGGGAGGGGGTGCTTTACGCCGG
CGGCGGCACCGTGCTGCCCGGGCTGCACGACCACCACGTGCACCTGCGCTCGGCTGCCTCGGCGCTGGATTCGTTCTTCG
TCGGGCCGCCCGGCGTCAGCACCCGCGCCGAGCTCACCCGGCTGCTGGCCAACGCCACGCCCGGACCCGACGGGTGGATC
CGCGCCGTGGGCTATCACGATTCGGTCGCCGGCGCGCTCGACCGGACCGCGCTGGATGCCATCGTGCGCGACGTCCCGGT
CCGCATCCAGCACCGCAGCGGCGCGCTGTGGATCCTCAATTCCGAGGCGCTGGGCCGGATCGGGCTGGCCGAACACCCGG
ACGGGCGGCTGCGCAGCGCCGACCGCGGCTGGTCGCAGGCGCTGGCGCACCGGGAGACCGACCTGGCCGAGCTCAGCCGC
CGGATCACCGCGACCGGCGTCACCGGCGTCACCGACGCCACCCCCGACCTGGACGACGACGACCGGGCCGCGCTGGCCGC
CGCCCACGCGCGCGGCGAATTCCGGCCCCGGCCCAGCTTCCTCTCGCCGGGCAAGAAGATCCTGCACGACGACCGCCTCG
ACCTCGACGCCCTCACGGAATGGGTTGCCGGACAGCACGACACGGGCCAGCCGGTCGCCGTGCACTGCGTCACCGCCGCT
CAGCTGGTGGTGGCCATCGCCGCCCTGCGGGCGGCCGGCACCCACCCGCGGGACCGCATCGAACATGCCGCCGTGGTGCC
CGACGACAACCTGGCCGATCTGGCCGAACTCGGGGTGACCGTGGTGACCCAGCCCAATTTCGTCGCCGAGCGCGGTGATC
AGTACCTGGCCGAGGTGCCCGCCGACGAGCACGACCAGTTGTGGCGCCTCGCTTCGCTGCGCGACGCGCGGGTGCCCGTC
GCGCTGTCCACCGACATGCCGTTCGGCCACGGCGACCCGTGGACGGCGATGCGCGCCGCGGTGCACCGCACCACGCCCAG
CGGCGTCGTGCTGGGCACACGCGAATGTGTCTCGGCGCGAACGGCTTTGACGATGTTTTTGGGCCAGGCCGACCAGCCGG
ACCGGGTGCGCAGCGTGCAGCCCGGCGAGCCGGGCGACCTGTGTGTGCTCAACGAGCCGCCGCACACCGCGCTGGCCGAA
CTGGACGCCGGCATGGTGGCCGCCACCATCATCGGCGGTGAGCTCGTCTACTTCGCGATGTGA

Upstream 100 bases:

>100_bases
CCGACAACGCCGCCGTGCGTCACCTGGTCAGCCAAAGGCGTTGCCTGTCATGCTGATTCAGCGGGCCACCCTGCTGGACG
GGACGGCGGCCGACATCCGG

Downstream 100 bases:

>100_bases
CCTCAGCCGGCCGGCGTCAGCGCGGCCCGCAGGCTGTTGCACTGGCTGTCGAAAAACCGCTGCGACACTTGAACTTTCGG
CAAAATCAGGTCGAAGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: Exos Regulatory Protein AepA; Amidohydrolase Family Protein; Amidase; Hydrolase; Amidohydrolase Domain-Containing Protein; Amidohydrolase Family; TIM-Barrel Fold Metal-Dependent Hydrolase

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWI
RAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSR
RITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA
QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPV
ALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAE
LDAGMVAATIIGGELVYFAM

Sequences:

>Translated_420_residues
MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWI
RAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSR
RITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA
QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPV
ALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAE
LDAGMVAATIIGGELVYFAM
>Mature_419_residues
GARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVSTRAELTRLLANATPGPDGWIR
AVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILNSEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRR
ITATGVTGVTDATPDLDDDDRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAAQ
LVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVPADEHDQLWRLASLRDARVPVA
LSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSARTALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAEL
DAGMVAATIIGGELVYFAM

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44501; Mature: 44370

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVS
CCCCCCCCCCCCCCCHHCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TRAELTRLLANATPGPDGWIRAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILN
HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC
SEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRRITATGVTGVTDATPDLDDD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
DRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA
CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHH
QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVP
HHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHCCEEEEECCCHHHHCCCHHHHHCC
ADEHDQLWRLASLRDARVPVALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSAR
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHH
TALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAELDAGMVAATIIGGELVYFAM
HHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCEEEEEEC
>Mature Secondary Structure 
GARIEEVAPADDGLAARAGEGVLYAGGGTVLPGLHDHHVHLRSAASALDSFFVGPPGVS
CCCCCCCCCCCCCCHHCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TRAELTRLLANATPGPDGWIRAVGYHDSVAGALDRTALDAIVRDVPVRIQHRSGALWILN
HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEC
SEALGRIGLAEHPDGRLRSADRGWSQALAHRETDLAELSRRITATGVTGVTDATPDLDDD
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCC
DRAALAAAHARGEFRPRPSFLSPGKKILHDDRLDLDALTEWVAGQHDTGQPVAVHCVTAA
CHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEEHHHHH
QLVVAIAALRAAGTHPRDRIEHAAVVPDDNLADLAELGVTVVTQPNFVAERGDQYLAEVP
HHHHHHHHHHHCCCCCHHHHCCEEECCCCCHHHHHHCCEEEEECCCHHHHCCCHHHHHCC
ADEHDQLWRLASLRDARVPVALSTDMPFGHGDPWTAMRAAVHRTTPSGVVLGTRECVSAR
CCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHH
TALTMFLGQADQPDRVRSVQPGEPGDLCVLNEPPHTALAELDAGMVAATIIGGELVYFAM
HHHHHHHCCCCCCHHHCCCCCCCCCCEEEECCCCCHHHHHHCCCCEEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA