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The map label for this gene is yfdE [C]

Identifier: 41409751

GI number: 41409751

Start: 4057071

End: 4058321

Strand: Direct

Name: yfdE [C]

Synonym: MAP3653

Alternate gene names: 41409751

Gene position: 4057071-4058321 (Clockwise)

Preceding gene: 41409750

Following gene: 41409752

Centisome position: 84.0

GC content: 76.26

Gene sequence:

>1251_bases
CTGAGCCGCACGCCCGCGAGCACCGCCATGAGCACGGCCGCGAGCACGGCCCCGAGCACAATGGGTGACGTGAGCGCGGC
CGCGACCGACTGGGGAGGTAGCGGGCTGGCCTATCTGACCGGCCTGCCCAACGGCCCCGCCGACTTCTCCCGCGCCCCCG
TACTGTCCCGGGCGCACCAGGTGGCGGCGGCCATCGGGGCCCGGCTGGGCGTCGACGCCGACGCGGCGGTCCTGCTGAGC
GGGCGGGCCGCCCTGCTCGGGCTGCGGCGCGCCGGTCAGGTGTCGCCCGGCGGGGCCACCCGGCTGCTGGCGGCCCGCGA
CGGCTACTGCGCGCTCACCCTGTCCCGCGCCGACGACCTGGCCGCCGTCCCGGCACTGCTGCAGGTCGACGACGTGGCCG
GCGACCCGTGGCCGGCGCTGCGGTGCTGGGCCGCCGGCCGGGCCACCGCCGAAATCGTCGAGCGGGCGGCGCTGCTCGAC
ATCCCCGCGGCGGCGCTGGGCGAGGCGCGCCCGGCCGCCGAACACATCCAGCCGACCGCACCGGGCGGCGCGCCGCGTTC
GCCGCGCGGCCTGCTGGTCGCCGACCTGTCCTCGATGTGGGCCGGCCCGCTGTGCGGGCAGCTGCTGGCCCGCGCCGGGG
CCACCGTCGTCAAGGTGGAAAGCCCACGCCGCCCCGACGGCACCCGGGCCGGGAACCGGGCCTTCTTCGACTGGATGAAT
CACGGAAAGCTCTGCTACGGAATCGATTTCGACCGCGACGCCGACCAATTGCGCGAGCTGCTCACCGTCAGCGACATCGT
GATCGAGGGTTCCCGGCCGGCGGCGTTGCGACGTCGCGGGCTCGGACCGGCCGATATCGCGCCTCGGCCCGGGCGAATTT
GGCTGCAAATAACCGCTTTTGACGACGATCGGCCGGGCTTCGGCGATGACGCCGCGGTGGGCGGCGGCCTGGTGGGCACC
AGCGCCGCGGGGCCGGTGTTCTGCGGCGACGCCATCGCCGACCCGCTGACCGGGCTGCAGGCGGCCCTGGCGGTGGCCGA
ATCGCTGGGCCGCGGCGGCGGCGAACTCATCCGGCTGTCCATGGCCGGTGTCGCCGCCGGCTACGCCGCGCTGGGCACCG
AGCCGCCGACGTCGGATGCGCCGGTGTCACCGCCGGCGCCGCCGCCGCCGTCGGGGCCGGCCTCCGCGCTGGGCGCCGAC
AACGCCGCCGTGCGTCACCTGGTCAGCCAAAGGCGTTGCCTGTCATGCTGA

Upstream 100 bases:

>100_bases
GGGGCGTGCTCGGGCTGCGATCGCTGGTGTACGCGGTCAGCGACACACCGGACGAGCCGGACCGCGCCGTGCTGGACTGG
CGGTTCGACGCGCTGCAGTT

Downstream 100 bases:

>100_bases
TTCAGCGGGCCACCCTGCTGGACGGGACGGCGGCCGACATCCGGGTGGGCGCGCGGATCGAGGAGGTGGCGCCCGCGGAT
GATGGCCTGGCGGCCAGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Formyl-CoA Transferase; Caib/Baif Family Protein; CoA-Transferase Family III Family Protein; Acyl-CoA Transferase/Carnitine Dehydratase; CAIB/BAIF Family Protein; CoA-Transferase; Acyl-CoA Transferase; CoA-Transferase Family III Family; Facyl-CoA Transferase/Carnitine Dehydratase; Alpha-Methylacyl-CoA Racemase; Acyl-CoA Transferase/Carnitine Dehydratase-Like Protein; CaiB/BaiF Family Protein

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MSRTPASTAMSTAASTAPSTMGDVSAAATDWGGSGLAYLTGLPNGPADFSRAPVLSRAHQVAAAIGARLGVDADAAVLLS
GRAALLGLRRAGQVSPGGATRLLAARDGYCALTLSRADDLAAVPALLQVDDVAGDPWPALRCWAAGRATAEIVERAALLD
IPAAALGEARPAAEHIQPTAPGGAPRSPRGLLVADLSSMWAGPLCGQLLARAGATVVKVESPRRPDGTRAGNRAFFDWMN
HGKLCYGIDFDRDADQLRELLTVSDIVIEGSRPAALRRRGLGPADIAPRPGRIWLQITAFDDDRPGFGDDAAVGGGLVGT
SAAGPVFCGDAIADPLTGLQAALAVAESLGRGGGELIRLSMAGVAAGYAALGTEPPTSDAPVSPPAPPPPSGPASALGAD
NAAVRHLVSQRRCLSC

Sequences:

>Translated_416_residues
MSRTPASTAMSTAASTAPSTMGDVSAAATDWGGSGLAYLTGLPNGPADFSRAPVLSRAHQVAAAIGARLGVDADAAVLLS
GRAALLGLRRAGQVSPGGATRLLAARDGYCALTLSRADDLAAVPALLQVDDVAGDPWPALRCWAAGRATAEIVERAALLD
IPAAALGEARPAAEHIQPTAPGGAPRSPRGLLVADLSSMWAGPLCGQLLARAGATVVKVESPRRPDGTRAGNRAFFDWMN
HGKLCYGIDFDRDADQLRELLTVSDIVIEGSRPAALRRRGLGPADIAPRPGRIWLQITAFDDDRPGFGDDAAVGGGLVGT
SAAGPVFCGDAIADPLTGLQAALAVAESLGRGGGELIRLSMAGVAAGYAALGTEPPTSDAPVSPPAPPPPSGPASALGAD
NAAVRHLVSQRRCLSC
>Mature_415_residues
SRTPASTAMSTAASTAPSTMGDVSAAATDWGGSGLAYLTGLPNGPADFSRAPVLSRAHQVAAAIGARLGVDADAAVLLSG
RAALLGLRRAGQVSPGGATRLLAARDGYCALTLSRADDLAAVPALLQVDDVAGDPWPALRCWAAGRATAEIVERAALLDI
PAAALGEARPAAEHIQPTAPGGAPRSPRGLLVADLSSMWAGPLCGQLLARAGATVVKVESPRRPDGTRAGNRAFFDWMNH
GKLCYGIDFDRDADQLRELLTVSDIVIEGSRPAALRRRGLGPADIAPRPGRIWLQITAFDDDRPGFGDDAAVGGGLVGTS
AAGPVFCGDAIADPLTGLQAALAVAESLGRGGGELIRLSMAGVAAGYAALGTEPPTSDAPVSPPAPPPPSGPASALGADN
AAVRHLVSQRRCLSC

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI24648431, Length=183, Percent_Identity=32.7868852459016, Blast_Score=73, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42006; Mature: 41875

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00138 SUBTILASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTPASTAMSTAASTAPSTMGDVSAAATDWGGSGLAYLTGLPNGPADFSRAPVLSRAHQ
CCCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHH
VAAAIGARLGVDADAAVLLSGRAALLGLRRAGQVSPGGATRLLAARDGYCALTLSRADDL
HHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCH
AAVPALLQVDDVAGDPWPALRCWAAGRATAEIVERAALLDIPAAALGEARPAAEHIQPTA
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCCCC
PGGAPRSPRGLLVADLSSMWAGPLCGQLLARAGATVVKVESPRRPDGTRAGNRAFFDWMN
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHC
HGKLCYGIDFDRDADQLRELLTVSDIVIEGSRPAALRRRGLGPADIAPRPGRIWLQITAF
CCCEEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEEE
DDDRPGFGDDAAVGGGLVGTSAAGPVFCGDAIADPLTGLQAALAVAESLGRGGGELIRLS
CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
MAGVAAGYAALGTEPPTSDAPVSPPAPPPPSGPASALGADNAAVRHLVSQRRCLSC
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRTPASTAMSTAASTAPSTMGDVSAAATDWGGSGLAYLTGLPNGPADFSRAPVLSRAHQ
CCCCCHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHH
VAAAIGARLGVDADAAVLLSGRAALLGLRRAGQVSPGGATRLLAARDGYCALTLSRADDL
HHHHHHHHCCCCCCCEEEECCHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCCH
AAVPALLQVDDVAGDPWPALRCWAAGRATAEIVERAALLDIPAAALGEARPAAEHIQPTA
HHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCHHHHCCCCC
PGGAPRSPRGLLVADLSSMWAGPLCGQLLARAGATVVKVESPRRPDGTRAGNRAFFDWMN
CCCCCCCCCCEEEECHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHC
HGKLCYGIDFDRDADQLRELLTVSDIVIEGSRPAALRRRGLGPADIAPRPGRIWLQITAF
CCCEEEECCCCCCHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCCCCCEEEEEEEEE
DDDRPGFGDDAAVGGGLVGTSAAGPVFCGDAIADPLTGLQAALAVAESLGRGGGELIRLS
CCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
MAGVAAGYAALGTEPPTSDAPVSPPAPPPPSGPASALGADNAAVRHLVSQRRCLSC
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA