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The map label for this gene is lipC

Identifier: 41409754

GI number: 41409754

Start: 4060753

End: 4062000

Strand: Direct

Name: lipC

Synonym: MAP3656

Alternate gene names: NA

Gene position: 4060753-4062000 (Clockwise)

Preceding gene: 41409752

Following gene: 41409755

Centisome position: 84.08

GC content: 71.55

Gene sequence:

>1248_bases
GTGTGGGCAATCGCCCGTTTCGCGGACCGGGACGGGGGTACAGTTCCGGCCATGGCGCCGGGCATGACTCCCTACCTCAA
GTGGCTGCTGCGGGCCCGCCCCGCCGACTATGCGCTGGCCGTGAGCCTGGCCGGGGCGTCGCTGCCGGTGGTCGGCAGGC
ACCTCGAGCCGCTGGCCGGCCTGACGGCCATGGGCATGTGGGGCGCCCGGCACGCACCCGAGGTGATCTCGGCGGCCACC
CGGGACATGTTCGCCCCGGGTGGCGGCGACGCGCGGCGCCGGGACCGGGAGAGCACCCAGCAGGTCTCCCTGGCGGCGTT
GCGCGGGCTGGTATCGGCCGCCGAGCTGGAGAGCCAGTGGCCGGTGGCCCAGCGCACCCCGCCGATCTGGGACGGCGTGC
GCCGGCACCGCCACCTGTATCGGCGCGCCGTCCACTACGGCCACCACCCGGCCCAGGTGCTCGACGTGTGGCGGCGCAAG
GACCTGCCCGCGCAGCCCGCGCCGGTGCTGATCTTCGTGCCCGGCGGCGCCTGGGTGCACGGCAAGTCCATGGGCCAGGG
CTCGGCGCTCATGTCGCGGCTGGCCGAACAGGGCTGGGTGTGCCTGGCGATCGACTACCGGGTGGCCCCGCACCACCGCT
GGCCGCGTCACATCGTCGACGTCAAAACCGCCATCGCCTGGGCGCGGGCCAACGTCGACAAGTTCGGCGGCGACCGCAAT
TTCGTTGCGATAGCGGGATGTTCGGCCGGCGGCCACCTGAGCGCGCTGGCCGGGCTGACTCCCGACGACCCGCAGTACCG
GGGCATGCTGCCCGAGGGCGCCGACACCTCGGTGGACGCGGTCGTCGGGATCTACGGTCGCTACGACTGGGAGGACCGCT
CGACGCCGGAGCGGGTCCGGTTCGTCGATTTTCTGGAGCGGGTGGTGGTCAGGAAGTCGATCGCCCGTCATCCCGAGGTG
TTCCGCGACGCCTCGCCGATCGCCCGGGTGCACCGAAATGCGCCGCCGTTCTTGGTGATTCACGGCAGCAAGGACAGCGT
CATCCCGGTCGAGCAGGCCCGCAGCTTCGTCGAGCGGCTCAGGGCGGTATCGCATTCGACGGTGGGCTACCTGGAGTTGC
CCGGCGCGGGCCACGGATACGACCTCATCGACGGCGAGCGAGCCGGTGCGGCGGCACACGTGTGCTCGCTGTTCCTCGAT
CAGGTTCATCGCAGCAAGACACGGATCGGGGCAAAAGAGGTCATCTGA

Upstream 100 bases:

>100_bases
GAAATCCGCTCCGCACAGCGAACCGCCGAATCGGTTTCAACAGCGTCGATACCGCGCACAGCGATCCCGCCGGGCAAAGC
CCCGCGGCGCCGGCCCGCGG

Downstream 100 bases:

>100_bases
GCTGCCTGCGCTGAGTATGGTCCCTCTATGGGTAAGGGGCGGCGGTGAAGAGGCTTAGCGGCTGGGACTCGGTACTGCTG
TACAGCGAAGCACCGAACGT

Product: LipC

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold-3 Domain Protein; Lipase; Esterase/Lipase; Lipase/Esterase; Esterase/Lipase-Like Protein; Esterase; Esterase/Lipase/Thioesterase; Esterase/Lipase/Thioesterase Family Protein; Alpha/Beta Hydrolase; Alpha/Beta Hydrolase Fold-3 Domain-Containing Protein; Alpha/Beta Hydrolase Fold Domain Protein; Carboxylesterase; Carboxylesterase Family Protein; Esterase LipO; Pectinesterase; Esterase/Lipase-Like; Hydrolase; Esterase LipC; Para-Nitrobenzyl Esterase; Carboxylesterase LipQ; Membrane-Bound Esterase LipM; Alpha/Beta Hydrolase Family Protein; Dipeptidyl Aminopeptidases/Acylaminoacyl-Peptidases-Like; Triacylglycerol Lipase; Peptidase; Alpha/Beta Hydrolase Fold Protein-3 Domain Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Prolyl Oligopeptidase Family Protein; Arylformamidase; Alpha/Beta Hydrolase Fold Family Protein; Carboxylesterase Type B; Peptidase S9A/B/C Families; Coagulation Factor 5/8 Type Domain Protein; Lipase/Esterase Protein; Esterase LipM; Lipoprotein; Dienelactone Hydrolase

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MWAIARFADRDGGTVPAMAPGMTPYLKWLLRARPADYALAVSLAGASLPVVGRHLEPLAGLTAMGMWGARHAPEVISAAT
RDMFAPGGGDARRRDRESTQQVSLAALRGLVSAAELESQWPVAQRTPPIWDGVRRHRHLYRRAVHYGHHPAQVLDVWRRK
DLPAQPAPVLIFVPGGAWVHGKSMGQGSALMSRLAEQGWVCLAIDYRVAPHHRWPRHIVDVKTAIAWARANVDKFGGDRN
FVAIAGCSAGGHLSALAGLTPDDPQYRGMLPEGADTSVDAVVGIYGRYDWEDRSTPERVRFVDFLERVVVRKSIARHPEV
FRDASPIARVHRNAPPFLVIHGSKDSVIPVEQARSFVERLRAVSHSTVGYLELPGAGHGYDLIDGERAGAAAHVCSLFLD
QVHRSKTRIGAKEVI

Sequences:

>Translated_415_residues
MWAIARFADRDGGTVPAMAPGMTPYLKWLLRARPADYALAVSLAGASLPVVGRHLEPLAGLTAMGMWGARHAPEVISAAT
RDMFAPGGGDARRRDRESTQQVSLAALRGLVSAAELESQWPVAQRTPPIWDGVRRHRHLYRRAVHYGHHPAQVLDVWRRK
DLPAQPAPVLIFVPGGAWVHGKSMGQGSALMSRLAEQGWVCLAIDYRVAPHHRWPRHIVDVKTAIAWARANVDKFGGDRN
FVAIAGCSAGGHLSALAGLTPDDPQYRGMLPEGADTSVDAVVGIYGRYDWEDRSTPERVRFVDFLERVVVRKSIARHPEV
FRDASPIARVHRNAPPFLVIHGSKDSVIPVEQARSFVERLRAVSHSTVGYLELPGAGHGYDLIDGERAGAAAHVCSLFLD
QVHRSKTRIGAKEVI
>Mature_415_residues
MWAIARFADRDGGTVPAMAPGMTPYLKWLLRARPADYALAVSLAGASLPVVGRHLEPLAGLTAMGMWGARHAPEVISAAT
RDMFAPGGGDARRRDRESTQQVSLAALRGLVSAAELESQWPVAQRTPPIWDGVRRHRHLYRRAVHYGHHPAQVLDVWRRK
DLPAQPAPVLIFVPGGAWVHGKSMGQGSALMSRLAEQGWVCLAIDYRVAPHHRWPRHIVDVKTAIAWARANVDKFGGDRN
FVAIAGCSAGGHLSALAGLTPDDPQYRGMLPEGADTSVDAVVGIYGRYDWEDRSTPERVRFVDFLERVVVRKSIARHPEV
FRDASPIARVHRNAPPFLVIHGSKDSVIPVEQARSFVERLRAVSHSTVGYLELPGAGHGYDLIDGERAGAAAHVCSLFLD
QVHRSKTRIGAKEVI

Specific function: Unknown

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45458; Mature: 45458

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: PS00122 CARBOXYLESTERASE_B_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWAIARFADRDGGTVPAMAPGMTPYLKWLLRARPADYALAVSLAGASLPVVGRHLEPLAG
CCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH
LTAMGMWGARHAPEVISAATRDMFAPGGGDARRRDRESTQQVSLAALRGLVSAAELESQW
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVAQRTPPIWDGVRRHRHLYRRAVHYGHHPAQVLDVWRRKDLPAQPAPVLIFVPGGAWVH
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE
GKSMGQGSALMSRLAEQGWVCLAIDYRVAPHHRWPRHIVDVKTAIAWARANVDKFGGDRN
CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCC
FVAIAGCSAGGHLSALAGLTPDDPQYRGMLPEGADTSVDAVVGIYGRYDWEDRSTPERVR
EEEEEECCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHH
FVDFLERVVVRKSIARHPEVFRDASPIARVHRNAPPFLVIHGSKDSVIPVEQARSFVERL
HHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
RAVSHSTVGYLELPGAGHGYDLIDGERAGAAAHVCSLFLDQVHRSKTRIGAKEVI
HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MWAIARFADRDGGTVPAMAPGMTPYLKWLLRARPADYALAVSLAGASLPVVGRHLEPLAG
CCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH
LTAMGMWGARHAPEVISAATRDMFAPGGGDARRRDRESTQQVSLAALRGLVSAAELESQW
HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PVAQRTPPIWDGVRRHRHLYRRAVHYGHHPAQVLDVWRRKDLPAQPAPVLIFVPGGAWVH
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCEEE
GKSMGQGSALMSRLAEQGWVCLAIDYRVAPHHRWPRHIVDVKTAIAWARANVDKFGGDRN
CCCCCCHHHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCC
FVAIAGCSAGGHLSALAGLTPDDPQYRGMLPEGADTSVDAVVGIYGRYDWEDRSTPERVR
EEEEEECCCCCCHHHHCCCCCCCCHHCCCCCCCCCCCHHHHEECCCCCCCCCCCCHHHHH
FVDFLERVVVRKSIARHPEVFRDASPIARVHRNAPPFLVIHGSKDSVIPVEQARSFVERL
HHHHHHHHHHHHHHHHCHHHHHCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
RAVSHSTVGYLELPGAGHGYDLIDGERAGAAAHVCSLFLDQVHRSKTRIGAKEVI
HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA