Click here to switch to the map view.

The map label for this gene is IS1547_2

Identifier: 41409384

GI number: 41409384

Start: 3649257

End: 3650360

Strand: Direct

Name: IS1547_2

Synonym: MAP3286

Alternate gene names: NA

Gene position: 3649257-3650360 (Clockwise)

Preceding gene: 41409377

Following gene: 41409385

Centisome position: 75.56

GC content: 65.04

Gene sequence:

>1104_bases
GTGTCCGCCGACCGGCCCAACCGTCACCTCACAGTGAAGGAGGCAACCTCCATGGTTGTTGTTGGAGCCGATGTACACAA
GCGCACGCATACCTTCGTTGCGGTCGACGACGTGGGGCGCAAGCTCGGTGAGAAGGTCGTCGCGGCGACCACCGCGGGGC
ATGCCGAGGCGGTGATGTGGGCCCGGGAACGCTTCGGAACCGAGGTGGTGTGGGCGATCGAGGATTGCCGGCATTTGTCG
GCCCGGTTGGAGCGTGACTTGATGGGCTTTGGCCAGTCGGTGGTGCGGGTGCCGCCGAAGTTGATGGCCCAAACTCGGGC
GAGTGCACGCACGAGGGGTAAGTCTGACCCGATCGATGCGTTGGCGGTGGCGCGGGGGTTTTTGCGGGAGCCTGATCTGC
CGGTCGCTTCTCATGACGAGGTTTCGCGGGAATTAAAGTTGTTGGTGGATCGTCGCGAAGTCCTTGTGGCGCAACGCACT
GCGACGATCAACCGGCTGTTGTGGCGGGTGCACGAACTCGATCCCGACCACGCACCTAAGGCTGGTTCGCTGGATCTGGC
CAAGCATCGCCGCATCCTGGGTGACTGGCTGGTCACGGTGCCCGGCCTGGTCGCCGAACTCGCCCGTGACGAGCTGGCCG
ACATCACCCGGCTCACCGAGACCATCAACGCGTTGGCCAAACGGATTGGCGAGCGTGTCCGCGTTGTGGCCCCGGTGCTG
CTGTCTCTTCCTGGCTGCGCGGAGTTGACCGCGGCCAAACTCGTCGGGGAGGCCGCCGGAGTGACCCGTTTCAAAAGCGA
GGCCGCTTTCGCCCGCCATGCCGGGGTGGCGCCGATTCCGGTGTGGTCGGGAAACACCGCTGGACGAGTCCGGATGACGC
GCTCGGGCAACCGCCAACTCAACGCCGCTTTGCACCGCATCGCGGTTACCCAGATCCGTCTTGACGGCCTCGGGCAGACC
TACTACCGGCACCGCATCGCCGTCAGTGGTTCCAAGACTGAAGCCCTGCGCTGCCTCAAACGCCGCCTGGCCCGCGTCGT
CTTCCACCACCTACACACCGACCACCAAAACCGAATCCAGCCTTGCCAACCGGCAGCGGCTTGA

Upstream 100 bases:

>100_bases
TTGCCGCGTTGGGGTTGGCGTTCATGCGTTTTGTCGACGCCAGGTGTGAAGGACCGGCCGGCGTGACTTGATAGGAGCGT
GGCATCGCCCCCACTGAGAT

Downstream 100 bases:

>100_bases
CATAGGAGAAACTCATGCCCGATTGGACCGCAGCGCAACTGCCCTCCTTCGCCGGCCGGACCGTCATCGTCACCGGTGCC
AACGCCGGGTTGGGTGAGGT

Product: IS1547_2 transposase

Products: NA

Alternate protein names: Transposase Of; Transposase ; Family Transposase

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MSADRPNRHLTVKEATSMVVVGADVHKRTHTFVAVDDVGRKLGEKVVAATTAGHAEAVMWARERFGTEVVWAIEDCRHLS
ARLERDLMGFGQSVVRVPPKLMAQTRASARTRGKSDPIDALAVARGFLREPDLPVASHDEVSRELKLLVDRREVLVAQRT
ATINRLLWRVHELDPDHAPKAGSLDLAKHRRILGDWLVTVPGLVAELARDELADITRLTETINALAKRIGERVRVVAPVL
LSLPGCAELTAAKLVGEAAGVTRFKSEAAFARHAGVAPIPVWSGNTAGRVRMTRSGNRQLNAALHRIAVTQIRLDGLGQT
YYRHRIAVSGSKTEALRCLKRRLARVVFHHLHTDHQNRIQPCQPAAA

Sequences:

>Translated_367_residues
MSADRPNRHLTVKEATSMVVVGADVHKRTHTFVAVDDVGRKLGEKVVAATTAGHAEAVMWARERFGTEVVWAIEDCRHLS
ARLERDLMGFGQSVVRVPPKLMAQTRASARTRGKSDPIDALAVARGFLREPDLPVASHDEVSRELKLLVDRREVLVAQRT
ATINRLLWRVHELDPDHAPKAGSLDLAKHRRILGDWLVTVPGLVAELARDELADITRLTETINALAKRIGERVRVVAPVL
LSLPGCAELTAAKLVGEAAGVTRFKSEAAFARHAGVAPIPVWSGNTAGRVRMTRSGNRQLNAALHRIAVTQIRLDGLGQT
YYRHRIAVSGSKTEALRCLKRRLARVVFHHLHTDHQNRIQPCQPAAA
>Mature_366_residues
SADRPNRHLTVKEATSMVVVGADVHKRTHTFVAVDDVGRKLGEKVVAATTAGHAEAVMWARERFGTEVVWAIEDCRHLSA
RLERDLMGFGQSVVRVPPKLMAQTRASARTRGKSDPIDALAVARGFLREPDLPVASHDEVSRELKLLVDRREVLVAQRTA
TINRLLWRVHELDPDHAPKAGSLDLAKHRRILGDWLVTVPGLVAELARDELADITRLTETINALAKRIGERVRVVAPVLL
SLPGCAELTAAKLVGEAAGVTRFKSEAAFARHAGVAPIPVWSGNTAGRVRMTRSGNRQLNAALHRIAVTQIRLDGLGQTY
YRHRIAVSGSKTEALRCLKRRLARVVFHHLHTDHQNRIQPCQPAAA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40410; Mature: 40279

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS00579 RIBOSOMAL_L29 ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADRPNRHLTVKEATSMVVVGADVHKRTHTFVAVDDVGRKLGEKVVAATTAGHAEAVMW
CCCCCCCCEEEEECCCCEEEECCCCCHHHCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHH
ARERFGTEVVWAIEDCRHLSARLERDLMGFGQSVVRVPPKLMAQTRASARTRGKSDPIDA
HHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHH
LAVARGFLREPDLPVASHDEVSRELKLLVDRREVLVAQRTATINRLLWRVHELDPDHAPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AGSLDLAKHRRILGDWLVTVPGLVAELARDELADITRLTETINALAKRIGERVRVVAPVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLPGCAELTAAKLVGEAAGVTRFKSEAAFARHAGVAPIPVWSGNTAGRVRMTRSGNRQL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCHHH
NAALHRIAVTQIRLDGLGQTYYRHRIAVSGSKTEALRCLKRRLARVVFHHLHTDHQNRIQ
HHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PCQPAAA
CCCCCCC
>Mature Secondary Structure 
SADRPNRHLTVKEATSMVVVGADVHKRTHTFVAVDDVGRKLGEKVVAATTAGHAEAVMW
CCCCCCCEEEEECCCCEEEECCCCCHHHCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHH
ARERFGTEVVWAIEDCRHLSARLERDLMGFGQSVVRVPPKLMAQTRASARTRGKSDPIDA
HHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCCHHH
LAVARGFLREPDLPVASHDEVSRELKLLVDRREVLVAQRTATINRLLWRVHELDPDHAPK
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
AGSLDLAKHRRILGDWLVTVPGLVAELARDELADITRLTETINALAKRIGERVRVVAPVL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSLPGCAELTAAKLVGEAAGVTRFKSEAAFARHAGVAPIPVWSGNTAGRVRMTRSGNRQL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEECCCCHHH
NAALHRIAVTQIRLDGLGQTYYRHRIAVSGSKTEALRCLKRRLARVVFHHLHTDHQNRIQ
HHHHHHHHHHHHHHCCCCHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PCQPAAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA