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The map label for this gene is ydfG [C]

Identifier: 41409385

GI number: 41409385

Start: 3650375

End: 3651256

Strand: Direct

Name: ydfG [C]

Synonym: MAP3287

Alternate gene names: 41409385

Gene position: 3650375-3651256 (Clockwise)

Preceding gene: 41409384

Following gene: 41409386

Centisome position: 75.58

GC content: 69.39

Gene sequence:

>882_bases
ATGCCCGATTGGACCGCAGCGCAACTGCCCTCCTTCGCCGGCCGGACCGTCATCGTCACCGGTGCCAACGCCGGGTTGGG
TGAGGTCACCGCGCGCGAGTTGGCGCGGGTCGGCGGCCACGTCATCCTGGCCGTGCGCAACACCGACAAGGGCCGCGCCG
CCGCCGACCGGATGGCCGGCGTGGCGACCGGCCGGGTCGAGGTGCGTGAGCTCGACCTGCAGGACCTGGCGTCGGTGCGC
CGCTTCGCCGACGGCATCGACACGGTCGACGTCCTGGTCAACAACGCGGGCATCATGGCCACCAAGCACGCGGTGACCGT
CGACGGTTTCGAGGGCCAGATCGGCACCAACCACCTCGGCCACTTCGCGCTGACCAACCTGCTGTTGCCCAAGCTGACCG
ACCGGGTGGTGACGGTGTCCTCGCTGATGCACCACTTCGGCTACATCAGCCTCAAGGATCTGAACTTCCGGTCGCGGCCG
TACTCGGCATGGCTGGCCTACAGCCAGTCGAAACTGGCCAACCTGCTGTTCACCAGCGAGTTACAGCGGCGTCTGGACGC
CGTGCCGTCGTCGCTGCGCGCCCTGGCCGCTCACCCGGGCTGGTCGCACACCAACCTGCAGGGGAACTCGGGCCGCAAAC
TCGGCGATGCGGCCGTCCTCGCGGTCGACCGCATCGTGTCCACCGACGCCGACTTCGGTGCCCGCCAGACGTTGTACGCC
GTCTCGCAAGATTTGCCGGGCGACACCTTCGTCGGCCCGCGGTTCGGGCTGTACGGGCGGACCCAGCCGACGTGGCGGAA
TTGGCCGGCCAAGCGGGCCGGGACCGCCGCCGCGCTGTGGGAGCTGTCCGAGGAACTGACCGGGACCAAGTTTCCGCTCT
GA

Upstream 100 bases:

>100_bases
AACGCCGCCTGGCCCGCGTCGTCTTCCACCACCTACACACCGACCACCAAAACCGAATCCAGCCTTGCCAACCGGCAGCG
GCTTGACATAGGAGAAACTC

Downstream 100 bases:

>100_bases
CCCGGATTTGCGGCGTGGGCGCGCCGCCGGGCCGCCGTCGCCGCGCCGGCCGCCCGGGGCGGTGACTAAATTGGTACTGA
GCGCAACCCCGCGGGGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDKGRAAADRMAGVATGRVEVRELDLQDLASVR
RFADGIDTVDVLVNNAGIMATKHAVTVDGFEGQIGTNHLGHFALTNLLLPKLTDRVVTVSSLMHHFGYISLKDLNFRSRP
YSAWLAYSQSKLANLLFTSELQRRLDAVPSSLRALAAHPGWSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYA
VSQDLPGDTFVGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTKFPL

Sequences:

>Translated_293_residues
MPDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDKGRAAADRMAGVATGRVEVRELDLQDLASVR
RFADGIDTVDVLVNNAGIMATKHAVTVDGFEGQIGTNHLGHFALTNLLLPKLTDRVVTVSSLMHHFGYISLKDLNFRSRP
YSAWLAYSQSKLANLLFTSELQRRLDAVPSSLRALAAHPGWSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYA
VSQDLPGDTFVGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTKFPL
>Mature_292_residues
PDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDKGRAAADRMAGVATGRVEVRELDLQDLASVRR
FADGIDTVDVLVNNAGIMATKHAVTVDGFEGQIGTNHLGHFALTNLLLPKLTDRVVTVSSLMHHFGYISLKDLNFRSRPY
SAWLAYSQSKLANLLFTSELQRRLDAVPSSLRALAAHPGWSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYAV
SQDLPGDTFVGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTKFPL

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI225579078, Length=219, Percent_Identity=49.3150684931507, Blast_Score=164, Evalue=8e-41,
Organism=Homo sapiens, GI186928839, Length=300, Percent_Identity=39.6666666666667, Blast_Score=155, Evalue=3e-38,
Organism=Homo sapiens, GI166795268, Length=212, Percent_Identity=47.1698113207547, Blast_Score=151, Evalue=8e-37,
Organism=Homo sapiens, GI10190746, Length=215, Percent_Identity=44.6511627906977, Blast_Score=141, Evalue=5e-34,
Organism=Homo sapiens, GI7706523, Length=293, Percent_Identity=38.2252559726962, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI19923931, Length=172, Percent_Identity=47.093023255814, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI193804850, Length=211, Percent_Identity=40.2843601895735, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI146231950, Length=206, Percent_Identity=41.747572815534, Blast_Score=108, Evalue=4e-24,
Organism=Homo sapiens, GI13375997, Length=141, Percent_Identity=31.2056737588652, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=30.622009569378, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI72001364, Length=211, Percent_Identity=36.4928909952607, Blast_Score=110, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17558006, Length=219, Percent_Identity=35.6164383561644, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17532791, Length=252, Percent_Identity=30.1587301587302, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI17505416, Length=212, Percent_Identity=34.4339622641509, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193207620, Length=303, Percent_Identity=28.0528052805281, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17532805, Length=206, Percent_Identity=29.126213592233, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71992402, Length=205, Percent_Identity=31.7073170731707, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17535059, Length=202, Percent_Identity=29.7029702970297, Blast_Score=68, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI32565532, Length=208, Percent_Identity=29.8076923076923, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324820, Length=224, Percent_Identity=33.0357142857143, Blast_Score=94, Evalue=3e-20,
Organism=Drosophila melanogaster, GI28573296, Length=294, Percent_Identity=38.7755102040816, Blast_Score=147, Evalue=9e-36,
Organism=Drosophila melanogaster, GI22024069, Length=205, Percent_Identity=46.8292682926829, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19921754, Length=288, Percent_Identity=39.2361111111111, Blast_Score=146, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24586328, Length=196, Percent_Identity=44.3877551020408, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI161076371, Length=205, Percent_Identity=42.9268292682927, Blast_Score=130, Evalue=1e-30,
Organism=Drosophila melanogaster, GI45554248, Length=221, Percent_Identity=42.9864253393665, Blast_Score=127, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24640117, Length=221, Percent_Identity=42.9864253393665, Blast_Score=127, Evalue=7e-30,
Organism=Drosophila melanogaster, GI20129347, Length=293, Percent_Identity=34.1296928327645, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24647946, Length=241, Percent_Identity=34.0248962655602, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI45553409, Length=241, Percent_Identity=34.0248962655602, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24647948, Length=241, Percent_Identity=34.0248962655602, Blast_Score=115, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24656154, Length=210, Percent_Identity=38.0952380952381, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI19922628, Length=210, Percent_Identity=38.0952380952381, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28571526, Length=214, Percent_Identity=31.3084112149533, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24647931, Length=215, Percent_Identity=37.2093023255814, Blast_Score=75, Evalue=7e-14,
Organism=Drosophila melanogaster, GI21357041, Length=216, Percent_Identity=31.9444444444444, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI23397609, Length=206, Percent_Identity=31.0679611650485, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21358495, Length=216, Percent_Identity=31.9444444444444, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31628; Mature: 31497

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDKGRAAADRMAG
CCCCCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
VATGRVEVRELDLQDLASVRRFADGIDTVDVLVNNAGIMATKHAVTVDGFEGQIGTNHLG
HCCCCEEEEECCHHHHHHHHHHHCCCCEEHHHHCCCCEEEECCEEEECCCCCCCCCCHHH
HFALTNLLLPKLTDRVVTVSSLMHHFGYISLKDLNFRSRPYSAWLAYSQSKLANLLFTSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQRRLDAVPSSLRALAAHPGWSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
VSQDLPGDTFVGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTKFPL
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PDWTAAQLPSFAGRTVIVTGANAGLGEVTARELARVGGHVILAVRNTDKGRAAADRMAG
CCCCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
VATGRVEVRELDLQDLASVRRFADGIDTVDVLVNNAGIMATKHAVTVDGFEGQIGTNHLG
HCCCCEEEEECCHHHHHHHHHHHCCCCEEHHHHCCCCEEEECCEEEECCCCCCCCCCHHH
HFALTNLLLPKLTDRVVTVSSLMHHFGYISLKDLNFRSRPYSAWLAYSQSKLANLLFTSE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
LQRRLDAVPSSLRALAAHPGWSHTNLQGNSGRKLGDAAVLAVDRIVSTDADFGARQTLYA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHH
VSQDLPGDTFVGPRFGLYGRTQPTWRNWPAKRAGTAAALWELSEELTGTKFPL
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8383668 [H]