| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409377
Identifier: 41409377
GI number: 41409377
Start: 3638859
End: 3639914
Strand: Direct
Name: 41409377
Synonym: MAP3279
Alternate gene names: NA
Gene position: 3638859-3639914 (Clockwise)
Preceding gene: 41409373
Following gene: 41409384
Centisome position: 75.34
GC content: 66.29
Gene sequence:
>1056_bases ATGACTGACACGGTCAAGGTGTCCGTGGACCGCAGCTCGGTCGCCATGGGCGACGATGTCGAGTCGCACCGCGAATTCTG GGTTTTCCCCGAATCGGCCACGGTCGACGACCTACTGGTCGAGATTTCCTCGCACTTCTTGCCGGGAATCGCCGGACCGG CCGGCTGGCGCGTGTACCTCGGGACTCGTCGCGATGAGCGGCAGGAGATCGGCCTCATCTACACCCGCGATGACCTCGGA CAGCAGGACCAAATCTGTCGGTTGTCGGCCGGCAAAACAACGCTGGGTGAGTTGGCCCGACGCACTGGACTACCCGAGCT GGACGTCTATGCGTCGTACCTTACCTTCGACCGGGCCCGGCCTTTGGCACTCGACGAGATCACGGGGGGCCCCACCTTCA CCGGCTGCCGACCGGACAAACTGGAATCCGAGGCGGCCGCCGACGCCAAGCGGGATTGGGTGATGTTGCGTGAGCTGGAC CGGCGCGCCGCCGCCGTCGCCGGCACGCGCCGGGACTGGGTTCGGCGCACCCTGCTGGCCGCTCCCCCGCCGTGGATCGA TGTCTTCATCGCACGCAACTTTCACTACCTGACCGAGCTGCACTGCCCGGCCAGCATGGCTCTGGCCGCAAAGTTGTTGG GCGTCAACGAGTCCCCTCCGGAGGACTTCGCGGCCCGGGCCCACGCGGACGTCCGGCCCAACGTCGTGATCCTGGCGATG GTGCTGGCCGCGTTCGAATGGGGAACCGAGCGCGACACATGGCGCGTCGGCGAACGACCGCACCGCAAGGCCTATCTCGA GCTGCTCGCCCATTGCGGCTACCGGCTCTCGCCGATCGAGCAGGTCATGGCCGGCCACATCGGCATCGAGCAGCTCAAGC TTTCCGAGGCCGACAGCGCCAGGCTCGACCGCATCCGGCAACTGCGGGACCAGCAACACCAGCTCCGCATGAGCCGCTAC TACACAAAAACCCTCAGCGAGGAGCAGTACCGGGCCGCCATCGAACCCGTCCATGCCGAGCTTTCCAGTTTGGGAGAGCT TCCCGGGCCGATGTAG
Upstream 100 bases:
>100_bases TCGGCATCGCCTAAGCATGACGCAGCGGCCACGCAATTGATCCCGGAACGCGGCGCGGTTTCGATACTTTTGTAGGTCCA ACGGCAGTGAGGGCTCAGAT
Downstream 100 bases:
>100_bases GTCATCGAGACCGGCTGCGATCGAACAGAATCGGTGGCGCCCGCGGTTACTTGGCGGGCTCGCCCGGTTCGGGAGCACCC TGGCGGCGCGCCGCGAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTDTVKVSVDRSSVAMGDDVESHREFWVFPESATVDDLLVEISSHFLPGIAGPAGWRVYLGTRRDERQEIGLIYTRDDLG QQDQICRLSAGKTTLGELARRTGLPELDVYASYLTFDRARPLALDEITGGPTFTGCRPDKLESEAAADAKRDWVMLRELD RRAAAVAGTRRDWVRRTLLAAPPPWIDVFIARNFHYLTELHCPASMALAAKLLGVNESPPEDFAARAHADVRPNVVILAM VLAAFEWGTERDTWRVGERPHRKAYLELLAHCGYRLSPIEQVMAGHIGIEQLKLSEADSARLDRIRQLRDQQHQLRMSRY YTKTLSEEQYRAAIEPVHAELSSLGELPGPM
Sequences:
>Translated_351_residues MTDTVKVSVDRSSVAMGDDVESHREFWVFPESATVDDLLVEISSHFLPGIAGPAGWRVYLGTRRDERQEIGLIYTRDDLG QQDQICRLSAGKTTLGELARRTGLPELDVYASYLTFDRARPLALDEITGGPTFTGCRPDKLESEAAADAKRDWVMLRELD RRAAAVAGTRRDWVRRTLLAAPPPWIDVFIARNFHYLTELHCPASMALAAKLLGVNESPPEDFAARAHADVRPNVVILAM VLAAFEWGTERDTWRVGERPHRKAYLELLAHCGYRLSPIEQVMAGHIGIEQLKLSEADSARLDRIRQLRDQQHQLRMSRY YTKTLSEEQYRAAIEPVHAELSSLGELPGPM >Mature_350_residues TDTVKVSVDRSSVAMGDDVESHREFWVFPESATVDDLLVEISSHFLPGIAGPAGWRVYLGTRRDERQEIGLIYTRDDLGQ QDQICRLSAGKTTLGELARRTGLPELDVYASYLTFDRARPLALDEITGGPTFTGCRPDKLESEAAADAKRDWVMLRELDR RAAAVAGTRRDWVRRTLLAAPPPWIDVFIARNFHYLTELHCPASMALAAKLLGVNESPPEDFAARAHADVRPNVVILAMV LAAFEWGTERDTWRVGERPHRKAYLELLAHCGYRLSPIEQVMAGHIGIEQLKLSEADSARLDRIRQLRDQQHQLRMSRYY TKTLSEEQYRAAIEPVHAELSSLGELPGPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39501; Mature: 39370
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTVKVSVDRSSVAMGDDVESHREFWVFPESATVDDLLVEISSHFLPGIAGPAGWRVYL CCCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE GTRRDERQEIGLIYTRDDLGQQDQICRLSAGKTTLGELARRTGLPELDVYASYLTFDRAR CCCCCCHHHCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC PLALDEITGGPTFTGCRPDKLESEAAADAKRDWVMLRELDRRAAAVAGTRRDWVRRTLLA CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC APPPWIDVFIARNFHYLTELHCPASMALAAKLLGVNESPPEDFAARAHADVRPNVVILAM CCCCCEEEHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH VLAAFEWGTERDTWRVGERPHRKAYLELLAHCGYRLSPIEQVMAGHIGIEQLKLSEADSA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCHHH RLDRIRQLRDQQHQLRMSRYYTKTLSEEQYRAAIEPVHAELSSLGELPGPM HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TDTVKVSVDRSSVAMGDDVESHREFWVFPESATVDDLLVEISSHFLPGIAGPAGWRVYL CCCEEEEECCCCCCCCCCHHCCCCEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEE GTRRDERQEIGLIYTRDDLGQQDQICRLSAGKTTLGELARRTGLPELDVYASYLTFDRAR CCCCCCHHHCCEEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC PLALDEITGGPTFTGCRPDKLESEAAADAKRDWVMLRELDRRAAAVAGTRRDWVRRTLLA CCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC APPPWIDVFIARNFHYLTELHCPASMALAAKLLGVNESPPEDFAARAHADVRPNVVILAM CCCCCEEEHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHH VLAAFEWGTERDTWRVGERPHRKAYLELLAHCGYRLSPIEQVMAGHIGIEQLKLSEADSA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHCCCCCHHH RLDRIRQLRDQQHQLRMSRYYTKTLSEEQYRAAIEPVHAELSSLGELPGPM HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA