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The map label for this gene is exuR [C]

Identifier: 41409210

GI number: 41409210

Start: 3459298

End: 3460755

Strand: Reverse

Name: exuR [C]

Synonym: MAP3112c

Alternate gene names: 41409210

Gene position: 3460755-3459298 (Counterclockwise)

Preceding gene: 41409211

Following gene: 41409209

Centisome position: 71.65

GC content: 71.19

Gene sequence:

>1458_bases
ATGAACGCGGAGCCCAGAACCGGTCCGGCGAAAACGCTCGCGTCGGCCCTCGCCCGGGACATCGAAGCCGAGATCGTCCG
GCGCGGGTGGGCAGTCGGCGAATCGCTGGGCTCCGAACCGGCGCTGCAACAGCGCTTCGGGGTGAGCCGCTCGGTGCTGC
GGGAGGCCGTTCGTCTGGTCGAACATCACCAGGTCGCCCGGATGCGCCGCGGCCCCAACGGGGGGCTGTACATCTGCGAG
CCCGACGCCGGGCCGGCCACCCGCGCCGTCGTCATCTACCTCGAATACCTGGGCACCACACTGGCCGATCTGCTCAACGC
GCGGCTGGTGCTCGAGCCGCTGGCGGCCTCGCTGGCCGCCGAGCGGATCGACGAGGCCGGCATCGCCCGGCTGCGCGCGG
TGTTGCACGCCGAGCAGCAGTGGAGGCCCGGCCTGCCGATGCCGCGCGACGAGTTCCACATCGCGCTGGCCGAGCAATCC
AAAAACCCGGTGCTGCAACTGTTCATCAAGGTCCTGATGCGGCTCACCACCCGCTACGCCCTGCAATCGCGAACGGACTC
CGAGACCGAGGCCCTCGAGGCGGTCGACCACCTGCACACCCACCACTCCCGGATCGTCGCGGCGGTCACGGCCGGCGACC
CGGCGCGGGCCAAGACGCTGTCCGAGCGCCACGTCGAGGCGGTGACGGCCTGGCTGCAACGGCATCACGCCGGTGACCGC
AACCGCGGGCGGACGCCGCGCCGACCGCTCAATTCCGAAGTGCCGCAAGGAAAATTGGCCGAAATGCTGGCCGCCACCAT
CGGCGACGACATCGCCGCCGACGGCTGGCGGGTGGGCTCGGTCTTCGGCACCGAGACGGCCCTGCTGCAGCGCTACCGGG
TCAGCCGCGCGGTGTTCCGCGAAGCCGTGCGCCTCCTCGAGTACCACTCGATCGCCCACATGCGGCGCGGCCCGGGCGGC
GGGCTGGTGATCGCCGAGCCGGCGGCGCAGGCCAGCATCGACACCATCGCCCTGTACCTGCAATACCGCGACCCGAGCCG
GGAAGACCTGCGCTGCGTCCGGGACGCCATCGAGATCGACAACGTCGCCAAGGTCGTCAAACGGCTGGCCGAGCCGCAGG
TGGCGGCATTTGTGGCCAGCCGCCGCTCCGGGCTGCCCGACGACTCCCGACAAACCCCCGACGACGTGCGGCGGGCGATC
GCCGAGGAATTCGACTTCCACGTCGGGTTGGCACAACTCGCCGGCAACGCCCCGCTGGATTTGTTCCTGCGGATCATCGT
CGAGCTGTTCCGCCGGCACTGGTCGAGCACCGGACAGGCGCTACCGACCTGGTCGGACGTGCGCGCGGTGCACCACGCGC
ACCTGCGGATCGCCGACGCGGTCGCGGCCGGCGACCTGAGCGTCGCCAGCTACCGGCTGCGCCGTCATCTGGACGCGGCC
GCCTCCTGGTGGCTGTAG

Upstream 100 bases:

>100_bases
GGGAGCGGCAGGTGGCGCGCCGCCCGCAGGTGGGCGTGGTGTCCGTCGGCGGCGGGCCCGTCGCGGGATGCATGCTGCTC
ACCTGCCGGTAGGGCGATCG

Downstream 100 bases:

>100_bases
CGCGCAAATGTGATCTGTTGCGCCGCATAGCGCGGGCCGGTCTGGGGTACTGGAACAGGGGGCGGCGTGGGCCGGCCCAG
CAGGGAGTTGGCCCAAGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein GntR HTH; GntR Domain-Containing Protein; Transcriptional Regulator; GntR Domain Protein; Transcriptional Regulator GntR Family; Transcriptional Regulatory Protein; GntR Family Regulator; GntR-Family Transcriptional Regulator; GntR Regulatory Protein; Transcriptional Regulator NanR; Gntr Family Transcriptional Regulator; GntR Transcriptional Regulators Family; Transcriptional Regulator PdhR

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLVEHHQVARMRRGPNGGLYICE
PDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAAERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQS
KNPVLQLFIKVLMRLTTRYALQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGDR
NRGRTPRRPLNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRYRVSRAVFREAVRLLEYHSIAHMRRGPGG
GLVIAEPAAQASIDTIALYLQYRDPSREDLRCVRDAIEIDNVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAI
AEEFDFHVGLAQLAGNAPLDLFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYRLRRHLDAA
ASWWL

Sequences:

>Translated_485_residues
MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLVEHHQVARMRRGPNGGLYICE
PDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAAERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQS
KNPVLQLFIKVLMRLTTRYALQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGDR
NRGRTPRRPLNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRYRVSRAVFREAVRLLEYHSIAHMRRGPGG
GLVIAEPAAQASIDTIALYLQYRDPSREDLRCVRDAIEIDNVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAI
AEEFDFHVGLAQLAGNAPLDLFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYRLRRHLDAA
ASWWL
>Mature_485_residues
MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLVEHHQVARMRRGPNGGLYICE
PDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAAERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQS
KNPVLQLFIKVLMRLTTRYALQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGDR
NRGRTPRRPLNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRYRVSRAVFREAVRLLEYHSIAHMRRGPGG
GLVIAEPAAQASIDTIALYLQYRDPSREDLRCVRDAIEIDNVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAI
AEEFDFHVGLAQLAGNAPLDLFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYRLRRHLDAA
ASWWL

Specific function: Repressor For The Exu Regulon That Encode Genes Involved In Hexuronate Utilization. It Regulates The Exut, Uxaca And Uxurab Operons. Binds D-Tagaturonate And D-Fructuronate As Inducers. [C]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53669; Mature: 53669

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
EHHQVARMRRGPNGGLYICEPDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAA
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQSKNPVLQLFIKVLMRLTTRYA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
LQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGDR
HHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NRGRTPRRPLNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRYRVSRAVFR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHH
EAVRLLEYHSIAHMRRGPGGGLVIAEPAAQASIDTIALYLQYRDPSREDLRCVRDAIEID
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHH
NVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAIAEEFDFHVGLAQLAGNAPLD
HHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYRLRRHLDAA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASWWL
HHCCC
>Mature Secondary Structure
MNAEPRTGPAKTLASALARDIEAEIVRRGWAVGESLGSEPALQQRFGVSRSVLREAVRLV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHH
EHHQVARMRRGPNGGLYICEPDAGPATRAVVIYLEYLGTTLADLLNARLVLEPLAASLAA
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERIDEAGIARLRAVLHAEQQWRPGLPMPRDEFHIALAEQSKNPVLQLFIKVLMRLTTRYA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
LQSRTDSETEALEAVDHLHTHHSRIVAAVTAGDPARAKTLSERHVEAVTAWLQRHHAGDR
HHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
NRGRTPRRPLNSEVPQGKLAEMLAATIGDDIAADGWRVGSVFGTETALLQRYRVSRAVFR
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCEEECCHHHHHHHHHHHHHHHHHHHH
EAVRLLEYHSIAHMRRGPGGGLVIAEPAAQASIDTIALYLQYRDPSREDLRCVRDAIEID
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHH
NVAKVVKRLAEPQVAAFVASRRSGLPDDSRQTPDDVRRAIAEEFDFHVGLAQLAGNAPLD
HHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH
LFLRIIVELFRRHWSSTGQALPTWSDVRAVHHAHLRIADAVAAGDLSVASYRLRRHLDAA
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ASWWL
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA