| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41409209
Identifier: 41409209
GI number: 41409209
Start: 3458209
End: 3459177
Strand: Reverse
Name: 41409209
Synonym: MAP3111c
Alternate gene names: NA
Gene position: 3459177-3458209 (Counterclockwise)
Preceding gene: 41409210
Following gene: 41409208
Centisome position: 71.62
GC content: 70.38
Gene sequence:
>969_bases GTGACGGCAGATGACGAAACCAGACAGTACGGTTTCGTTCACGCCGCGCTGATCTACCGCTCTCAGCAGGAGTTTTTGGA CGTGGTCGCCGGTTTCGTCGGCGACGGGCTGGCGGGGAACGAGGCCGTGCTGCTGGCCGTGCCGCCCGCCCTGATGGCGT TGCTGCGCGACGAACTGTACGCCGGCGGGGAGCCGCCCGCCGGCGTCCGCATGGCCGACATCACCGAGTCCGCCCGTAAT CCCAGCCGGTTCATGGCGATGCAGGGCGCGTTCGTCGACGAACACCCGGACCGGCGGGTGCGCATCGTCAGCCAGCTGGC GTGGCCGGGCCGGAGCCGGGAGGAGTTCGTCGCCTGCATCGAGCACGAGGCGCTGGTCAACGAGGCGATGGACGGCTACC CGGCCACGGCCCTGTGTTTGTATGACGCGAGCACGCTCGACGACGGCGTGCTGGCCGACGCGCGCGCGACGCACCCGCTG CTGTGCAAATCCGGTGCGCTGCAACGCAGTCCGGACTACGCCCCGGGCGAGGTGCTGGAGCGCTGCAACCAGCCGTTGCC CGCCAATCCCGGGGCCGTGACCTACTTGGTCCGCAGGTCGGCGGACCTGCGGCCGGCCCGCTCGTTCGCCGTCGACTACG CGGGCTGGGTCGGGCTGTCCCAGGAGAGCATCGAGGATCTGCAGTTGGTGGCCACCGAGCTGGCCACCAACAGCCTGATG TACACCGGGGGCGCCTGCCGGCTGGCGTTCTGGCAGGACGACAGGTATCTGGTGTGCGAGGCGCGCGACACCGGGCGGTT CGACGACCCGCTGGTGGGGCGGCTGGACCCGGGGCCCTGCGGTCCGGCCAGCCGCGGCCTGTACCTGGTGAACGCCATCT CCGATCTGGTGCGCACGCACACCACCTCCACCGGCACGACGATTCAGGCGTACCTGTGTTTCGAGCCGGCGGTCCGGCCG ACCGGCTGA
Upstream 100 bases:
>100_bases CGCCGCATAGCGCGGGCCGGTCTGGGGTACTGGAACAGGGGGCGGCGTGGGCCGGCCCAGCAGGGAGTTGGCCCAAGTGA TCGAAAGCGAGAGCGCGGAA
Downstream 100 bases:
>100_bases CGGCAAGCGGCCCGCCGGCAAGGGGATCCGGCGGGCCGCGGGTCTTGGTTGGTCAGCAGGTCAGCAGGGGAATGCAGAGG CCGCCGCCGGTCGTCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 322; Mature: 321
Protein sequence:
>322_residues MTADDETRQYGFVHAALIYRSQQEFLDVVAGFVGDGLAGNEAVLLAVPPALMALLRDELYAGGEPPAGVRMADITESARN PSRFMAMQGAFVDEHPDRRVRIVSQLAWPGRSREEFVACIEHEALVNEAMDGYPATALCLYDASTLDDGVLADARATHPL LCKSGALQRSPDYAPGEVLERCNQPLPANPGAVTYLVRRSADLRPARSFAVDYAGWVGLSQESIEDLQLVATELATNSLM YTGGACRLAFWQDDRYLVCEARDTGRFDDPLVGRLDPGPCGPASRGLYLVNAISDLVRTHTTSTGTTIQAYLCFEPAVRP TG
Sequences:
>Translated_322_residues MTADDETRQYGFVHAALIYRSQQEFLDVVAGFVGDGLAGNEAVLLAVPPALMALLRDELYAGGEPPAGVRMADITESARN PSRFMAMQGAFVDEHPDRRVRIVSQLAWPGRSREEFVACIEHEALVNEAMDGYPATALCLYDASTLDDGVLADARATHPL LCKSGALQRSPDYAPGEVLERCNQPLPANPGAVTYLVRRSADLRPARSFAVDYAGWVGLSQESIEDLQLVATELATNSLM YTGGACRLAFWQDDRYLVCEARDTGRFDDPLVGRLDPGPCGPASRGLYLVNAISDLVRTHTTSTGTTIQAYLCFEPAVRP TG >Mature_321_residues TADDETRQYGFVHAALIYRSQQEFLDVVAGFVGDGLAGNEAVLLAVPPALMALLRDELYAGGEPPAGVRMADITESARNP SRFMAMQGAFVDEHPDRRVRIVSQLAWPGRSREEFVACIEHEALVNEAMDGYPATALCLYDASTLDDGVLADARATHPLL CKSGALQRSPDYAPGEVLERCNQPLPANPGAVTYLVRRSADLRPARSFAVDYAGWVGLSQESIEDLQLVATELATNSLMY TGGACRLAFWQDDRYLVCEARDTGRFDDPLVGRLDPGPCGPASRGLYLVNAISDLVRTHTTSTGTTIQAYLCFEPAVRPT G
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34902; Mature: 34770
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADDETRQYGFVHAALIYRSQQEFLDVVAGFVGDGLAGNEAVLLAVPPALMALLRDELY CCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHH AGGEPPAGVRMADITESARNPSRFMAMQGAFVDEHPDRRVRIVSQLAWPGRSREEFVACI CCCCCCCCCEEHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH EHEALVNEAMDGYPATALCLYDASTLDDGVLADARATHPLLCKSGALQRSPDYAPGEVLE HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHH RCNQPLPANPGAVTYLVRRSADLRPARSFAVDYAGWVGLSQESIEDLQLVATELATNSLM HCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEE YTGGACRLAFWQDDRYLVCEARDTGRFDDPLVGRLDPGPCGPASRGLYLVNAISDLVRTH EECCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC TTSTGTTIQAYLCFEPAVRPTG CCCCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TADDETRQYGFVHAALIYRSQQEFLDVVAGFVGDGLAGNEAVLLAVPPALMALLRDELY CCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHH AGGEPPAGVRMADITESARNPSRFMAMQGAFVDEHPDRRVRIVSQLAWPGRSREEFVACI CCCCCCCCCEEHHHHHHHCCCHHHHEECCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHH EHEALVNEAMDGYPATALCLYDASTLDDGVLADARATHPLLCKSGALQRSPDYAPGEVLE HHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCHHHHH RCNQPLPANPGAVTYLVRRSADLRPARSFAVDYAGWVGLSQESIEDLQLVATELATNSLM HCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEE YTGGACRLAFWQDDRYLVCEARDTGRFDDPLVGRLDPGPCGPASRGLYLVNAISDLVRTH EECCEEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC TTSTGTTIQAYLCFEPAVRPTG CCCCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA