| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is thiL
Identifier: 41409115
GI number: 41409115
Start: 3356381
End: 3357406
Strand: Reverse
Name: thiL
Synonym: MAP3017c
Alternate gene names: 41409115
Gene position: 3357406-3356381 (Counterclockwise)
Preceding gene: 41409117
Following gene: 41409114
Centisome position: 69.51
GC content: 74.95
Gene sequence:
>1026_bases TTGTCTGTCGGGCCACTGTTACCCGGCTTCCCAGTATTGGCGGTCGGCCCGCCCGGGCGACAGCCCTATGGTGGTGGCGT GCGGGACGAATCGACGCTGCGGCAACTCGGCGAATTCGCCGTCATCGACCGGCTGGTGGCCGGGCGCCGTCAGCCGGCCG CGGTGACCCTCGGGCCCGGCGACGACGCCGCGCTGGTGACGACCGGCGACGGCCGCGTGGTGGTGTCGACCGACATGCTG GTGCAGGACCGGCATTTCCGGCTCGACTGGTCGACGCCGCACGACATCGGCCGCAAGGCGATCGCGCAGAACGCCGCGGA CATCGAGGCGATGGGCGCGCGGCCCACGGCGTTCGTGGTGGGCTTCGGCGCTCCCGGTCAGACCGCGGCAGCGCAGGTGG ACGCGCTGGTGGACGGCATGTGGGACGAGGCGCAGCGGGTGGGGGCCGGCATCGCCGGCGGCGATCTGGTCAGCTGCCCG CAGTGGGTCATCTCGGTCACCGCGCTCGGCGAGCTGGACGGGCGTTCCCCGGTGCGCCGCGCTGGCGCCGAACCCGGCTC GCTGATCGCCGTGGCCGGCGACCTGGGCCGATCCGCGGCGGGATTTGACCTGTGGCGCAATCAGATTGGCGGGTTCGACG AGCTGCGCCGCCGGCATGCGGTGCCGCAGCCGCCCTACGGCCAGGGTGCGGTGGCCGCGGCCGGGGGAGCGCAGGCGATG ATCGACGTCTCCGACGGCCTGATCGCCGACCTGCGGCACGTCGCCGAGGCGTCCGGGGTGGGCATGGACGTGTCCACCGC GGCGCTGGCCGCCGACCGTGACGCGGTGGCGGCCGCGGCGACCGCGGTGGGCGTCGACGCCTGGCCGTGGGTGCTGACCG GCGGTGAGGACCACGCCCTGGTGGCCTGTTTCCCCGGGCCCGCGCCGGCCGGCTGGCGCATCATCGGGCGGGTTCTCGAC GGCCCGGCCCGGGTGCTGGTCGACGAGCGGGAGTGGAGCGGCCCCGCCGGCTGGCAGTCGTACTAG
Upstream 100 bases:
>100_bases CCCCGATCGTCGTCACCGCCAGCGCGACCGCGACCATGATCACCGCCCGCGGGGGCCCGCCGTCGGCCTCCGATTCGGTT GCCACCGCCCGCGCACCTCC
Downstream 100 bases:
>100_bases GGTGGCCCGGTGATCTCTAAGTGACCGATCCCGCGGCCGGCGGGGGCCGGCGATGACGGCGCGCCCGCTGAATGAACTCG TCGAGCCCGGCTGGGCGCGT
Product: thiamine monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MSVGPLLPGFPVLAVGPPGRQPYGGGVRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPGDDAALVTTGDGRVVVSTDML VQDRHFRLDWSTPHDIGRKAIAQNAADIEAMGARPTAFVVGFGAPGQTAAAQVDALVDGMWDEAQRVGAGIAGGDLVSCP QWVISVTALGELDGRSPVRRAGAEPGSLIAVAGDLGRSAAGFDLWRNQIGGFDELRRRHAVPQPPYGQGAVAAAGGAQAM IDVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAATAVGVDAWPWVLTGGEDHALVACFPGPAPAGWRIIGRVLD GPARVLVDEREWSGPAGWQSY
Sequences:
>Translated_341_residues MSVGPLLPGFPVLAVGPPGRQPYGGGVRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPGDDAALVTTGDGRVVVSTDML VQDRHFRLDWSTPHDIGRKAIAQNAADIEAMGARPTAFVVGFGAPGQTAAAQVDALVDGMWDEAQRVGAGIAGGDLVSCP QWVISVTALGELDGRSPVRRAGAEPGSLIAVAGDLGRSAAGFDLWRNQIGGFDELRRRHAVPQPPYGQGAVAAAGGAQAM IDVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAATAVGVDAWPWVLTGGEDHALVACFPGPAPAGWRIIGRVLD GPARVLVDEREWSGPAGWQSY >Mature_340_residues SVGPLLPGFPVLAVGPPGRQPYGGGVRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPGDDAALVTTGDGRVVVSTDMLV QDRHFRLDWSTPHDIGRKAIAQNAADIEAMGARPTAFVVGFGAPGQTAAAQVDALVDGMWDEAQRVGAGIAGGDLVSCPQ WVISVTALGELDGRSPVRRAGAEPGSLIAVAGDLGRSAAGFDLWRNQIGGFDELRRRHAVPQPPYGQGAVAAAGGAQAMI DVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAATAVGVDAWPWVLTGGEDHALVACFPGPAPAGWRIIGRVLDG PARVLVDEREWSGPAGWQSY
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=282, Percent_Identity=35.4609929078014, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 35035; Mature: 34904
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVGPLLPGFPVLAVGPPGRQPYGGGVRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPG CCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC DDAALVTTGDGRVVVSTDMLVQDRHFRLDWSTPHDIGRKAIAQNAADIEAMGARPTAFVV CCEEEEEECCCEEEEEECEEEECCEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCEEEEE GFGAPGQTAAAQVDALVDGMWDEAQRVGAGIAGGDLVSCPQWVISVTALGELDGRSPVRR EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCCCHHHH AGAEPGSLIAVAGDLGRSAAGFDLWRNQIGGFDELRRRHAVPQPPYGQGAVAAAGGAQAM CCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCEEE IDVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAATAVGVDAWPWVLTGGEDHAL EECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCEE VACFPGPAPAGWRIIGRVLDGPARVLVDEREWSGPAGWQSY EEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SVGPLLPGFPVLAVGPPGRQPYGGGVRDESTLRQLGEFAVIDRLVAGRRQPAAVTLGPG CCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC DDAALVTTGDGRVVVSTDMLVQDRHFRLDWSTPHDIGRKAIAQNAADIEAMGARPTAFVV CCEEEEEECCCEEEEEECEEEECCEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCEEEEE GFGAPGQTAAAQVDALVDGMWDEAQRVGAGIAGGDLVSCPQWVISVTALGELDGRSPVRR EECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHHCCCCCCCHHHH AGAEPGSLIAVAGDLGRSAAGFDLWRNQIGGFDELRRRHAVPQPPYGQGAVAAAGGAQAM CCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCEEECCCCEEE IDVSDGLIADLRHVAEASGVGMDVSTAALAADRDAVAAAATAVGVDAWPWVLTGGEDHAL EECCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCEE VACFPGPAPAGWRIIGRVLDGPARVLVDEREWSGPAGWQSY EEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377; 8419296 [H]