| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mpb63 [H]
Identifier: 41409048
GI number: 41409048
Start: 3284250
End: 3284822
Strand: Reverse
Name: mpb63 [H]
Synonym: MAP2950c
Alternate gene names: 41409048
Gene position: 3284822-3284250 (Counterclockwise)
Preceding gene: 41409050
Following gene: 41409047
Centisome position: 68.01
GC content: 71.03
Gene sequence:
>573_bases ATGAAGGTCACCAAGAACGCCGTGCTGACAGCCGCCGCTGCCGGGGGTATCGCCGCGGCGAGCGTGTTCGCGGCGGCGCC GGCCGCCGCCGCGCCCAACATCCAGGGGTTCGGCGTCAGCGAGCAGCTGGTGGACGGGCCGCTGGTCACCGACTACACGG TGAGCAATCTGCAGCCCAGCAACGTCAGCATTCCGGGTTACACCCCGAAAGGCACGCTCTACCAGGCCGACGTCAGCGTC CGCTCGGACGGTGGGGTGGTCACCCCGATGGTCCACGACTTCATCGCCCGCGGCCCCAACGGCCAGAACTACCGGGTGAT CGACAACGTGGCGGTGCCCAACGGCCTGAGCCCCGCGCCGATCCCGCAGGGCACCGAGTCGACCGGGACGCTGTACTTCG ACGTGACCGGCGCGCCGCCCAACGGCGTGGTCTACAACGACGGCATGCAGGATGTCCTGATGTGGACCTCCAACGTGCCC AGCTCCGCGCCCGGCGCGCCGAACAGCCCCGCACCGGGTGCGCCGAACAGCCCGGCACCGGGTGCTCCGCCCGCGCCGGC GGCGCACACGTAA
Upstream 100 bases:
>100_bases GGGCGCCGGTGTTTAAGTCGAAGATTTGTTGGCTATTTGCCGGATTATCTGCGAAAGGCCCTTCCGGGGGGCAATTGTTC GAGACGAAAGGAAATGAACA
Downstream 100 bases:
>100_bases ACCGTCGAACCGTCGAAGAACTCCCCGCACCGCAACGGTGCGGGGAGTTTTGCGGTGCGGGAATCGTGCGGGCGCGAATC GGGTATCCGGAATTCATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: 16 kDa immunoprotective extracellular protein; Antigen MPB63 [H]
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKVTKNAVLTAAAAGGIAAASVFAAAPAAAAPNIQGFGVSEQLVDGPLVTDYTVSNLQPSNVSIPGYTPKGTLYQADVSV RSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAPIPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWTSNVP SSAPGAPNSPAPGAPNSPAPGAPPAPAAHT
Sequences:
>Translated_190_residues MKVTKNAVLTAAAAGGIAAASVFAAAPAAAAPNIQGFGVSEQLVDGPLVTDYTVSNLQPSNVSIPGYTPKGTLYQADVSV RSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAPIPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWTSNVP SSAPGAPNSPAPGAPNSPAPGAPPAPAAHT >Mature_190_residues MKVTKNAVLTAAAAGGIAAASVFAAAPAAAAPNIQGFGVSEQLVDGPLVTDYTVSNLQPSNVSIPGYTPKGTLYQADVSV RSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAPIPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWTSNVP SSAPGAPNSPAPGAPNSPAPGAPPAPAAHT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015250 - ProDom: PD886639 [H]
Pfam domain/function: PF09167 DUF1942 [H]
EC number: NA
Molecular weight: Translated: 18928; Mature: 18928
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTKNAVLTAAAAGGIAAASVFAAAPAAAAPNIQGFGVSEQLVDGPLVTDYTVSNLQPS CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC NVSIPGYTPKGTLYQADVSVRSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAP CEECCCCCCCCCEEEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEEECEECCCCCCCCC IPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWTSNVPSSAPGAPNSPAPGAPNSPAP CCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GAPPAPAAHT CCCCCCCCCC >Mature Secondary Structure MKVTKNAVLTAAAAGGIAAASVFAAAPAAAAPNIQGFGVSEQLVDGPLVTDYTVSNLQPS CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCCCC NVSIPGYTPKGTLYQADVSVRSDGGVVTPMVHDFIARGPNGQNYRVIDNVAVPNGLSPAP CEECCCCCCCCCEEEEEEEEECCCCEECHHHHHHHHCCCCCCCEEEEECEECCCCCCCCC IPQGTESTGTLYFDVTGAPPNGVVYNDGMQDVLMWTSNVPSSAPGAPNSPAPGAPNSPAP CCCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC GAPPAPAAHT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]