Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41409050

Identifier: 41409050

GI number: 41409050

Start: 3286298

End: 3286711

Strand: Reverse

Name: 41409050

Synonym: MAP2952c

Alternate gene names: NA

Gene position: 3286711-3286298 (Counterclockwise)

Preceding gene: 41409052

Following gene: 41409048

Centisome position: 68.05

GC content: 69.81

Gene sequence:

>414_bases
ATGCCCAAGACGACCAAGGGCGGCGCGCCCAAGAAGGGCGAATTGCCCAGCACCCTGCAACGTTCCAGCGCCAAGGCGCA
GCGGACGTTCGCCAAAGCCCATGACGCGGCCGCGCAGGAGTACGGCAGCGAGGAACGCGCGCACCGGGTGGCCTACTCGG
CGGTCAAACACAGTTTCGAGAAGGTCGGCGACCACTGGGAGCCCAAGGCGAAGAAGGGTCCCTCCGACCAGCGGGCCCGC
AGCGGTGGCCCGCGGGCGTCCGGTGCGTCGGCCGAGGGCGTCGACGCCAACGCGAGCAAGAAGCACCTGCTGGACGTGGC
CCGCCGACTCGATGTCCGGGGCCGCTCGACGATGACCAAGTCCGAGTTGGTCGACGCGATCAAGAAGCACAACCGCCGGG
CGCGGGCCCGCTGA

Upstream 100 bases:

>100_bases
TCGCGGCGCCCCGGTGCGGGTGTTCGGCGGCGTGATTGCCGGCCCCGCAACGGGGTAACCGTCCGGCGGTAACCAGTCGG
GTGGCACACAAGGAGGTCCG

Downstream 100 bases:

>100_bases
CCGCACGCCAAACCAGCGGCGGCTCCGGTGTTTTCACCGGTTTAGCCGCCCGGCCGGTGGGCAACTTCAAGCGGCCCAAT
GCCTTTGGCGCTAGAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: ChaB Protein; Cation Transport Regulator

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRAR
SGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR

Sequences:

>Translated_137_residues
MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRAR
SGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR
>Mature_136_residues
PKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFEKVGDHWEPKAKKGPSDQRARS
GGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTKSELVDAIKKHNRRARAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14882; Mature: 14751

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KVGDHWEPKAKKGPSDQRARSGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTK
HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
SELVDAIKKHNRRARAR
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKTTKGGAPKKGELPSTLQRSSAKAQRTFAKAHDAAAQEYGSEERAHRVAYSAVKHSFE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KVGDHWEPKAKKGPSDQRARSGGPRASGASAEGVDANASKKHLLDVARRLDVRGRSTMTK
HHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
SELVDAIKKHNRRARAR
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA