| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41409047
Identifier: 41409047
GI number: 41409047
Start: 3283216
End: 3284154
Strand: Reverse
Name: 41409047
Synonym: MAP2949c
Alternate gene names: NA
Gene position: 3284154-3283216 (Counterclockwise)
Preceding gene: 41409048
Following gene: 41409044
Centisome position: 68.0
GC content: 70.82
Gene sequence:
>939_bases ATGAGTAACCCCGATCACAGACCGACGCAGGTGCGCGCCCAGGCGCAGCGCCACGCCGCCGAAACCCGGGCGACCATGCA GGAGCGACGCAACGGCCAACGCGGCGGGCTGAGCGGATGGGTCGCCGAGCGGGCGGCCCGATGGGATCTGTCCGGCCAGG ACGAGGACACCCTGCAGCGGCAGAAGTATCTGTGGAATGCGCTGGTGGACTACTGGTTTCGGATGGAGATCGACGGGTGG GAGAACATTCCGGACACACCGCCGGCGCTGCTGGTCGGGGTGCACTCCGGGGCGCCGTTCGTCTGGGACGCCTGGACCGT CGGCCTGCAGTGGTGGCGCCGGTTCGGGCCGGACCGCCCGCTGCACGGCACCGCCCACGACGCATTGATGGCAATCCCGT TGTTCGGGCGCTACTTCCGCTCGATGGGGGTCCTTCCGGCAGCCCCGGACGCGATCGCCACCGCGCTGGCGGAGGGGCGT GACGTGGCGCTGTGGCCCGGTGGGGAAGTGGACTCGCTGCGGCCGTGGACCGAGCGGGACCGCGCCAACCTGGCCGGGCG GACCGGGTTCGTCAAGATGGCGATCCGCGCCGGCGTGCCCATCGTGCCCATCGCCACCGTCGGCGGCGCCGACGCCATGC CGGTGCTGATTCGCGGCGACCGGCTCTCGAAAGCCTTGCGGCTGGACCGTTTACTGCGGCTCAAGGTGTTCCCGCTGGCG ATCTCGCTGCCCTGGGGGATCGCGCCGGCGGCGCTGCCTCAGCTGCCGCTGCCGGCCAAGATCCGGACGCGGTTCATGCC CCCCGTCGAGTTGGACAACGATCCCGCGCGGGTGCAGGACGACGAATACGTCGAGCGCAAATACCGGGAGGTGCAGGACT CGATCCAGCAGGGAATGGACGCGCTGGCGCGCCGGCGGGCATTCCCGGTCTTCGGCTGA
Upstream 100 bases:
>100_bases CGTAAACCGTCGAACCGTCGAAGAACTCCCCGCACCGCAACGGTGCGGGGAGTTTTGCGGTGCGGGAATCGTGCGGGCGC GAATCGGGTATCCGGAATTC
Downstream 100 bases:
>100_bases TCCTCATCGAAAGGTGTTGCCGCTCAGGGCTTCTGGTGCCCAACGATCCATTCCGGCTGCGGTGGCGTCGGCGCCCGGTA GCCGACTCCGCGGACCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSNPDHRPTQVRAQAQRHAAETRATMQERRNGQRGGLSGWVAERAARWDLSGQDEDTLQRQKYLWNALVDYWFRMEIDGW ENIPDTPPALLVGVHSGAPFVWDAWTVGLQWWRRFGPDRPLHGTAHDALMAIPLFGRYFRSMGVLPAAPDAIATALAEGR DVALWPGGEVDSLRPWTERDRANLAGRTGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDRLSKALRLDRLLRLKVFPLA ISLPWGIAPAALPQLPLPAKIRTRFMPPVELDNDPARVQDDEYVERKYREVQDSIQQGMDALARRRAFPVFG
Sequences:
>Translated_312_residues MSNPDHRPTQVRAQAQRHAAETRATMQERRNGQRGGLSGWVAERAARWDLSGQDEDTLQRQKYLWNALVDYWFRMEIDGW ENIPDTPPALLVGVHSGAPFVWDAWTVGLQWWRRFGPDRPLHGTAHDALMAIPLFGRYFRSMGVLPAAPDAIATALAEGR DVALWPGGEVDSLRPWTERDRANLAGRTGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDRLSKALRLDRLLRLKVFPLA ISLPWGIAPAALPQLPLPAKIRTRFMPPVELDNDPARVQDDEYVERKYREVQDSIQQGMDALARRRAFPVFG >Mature_311_residues SNPDHRPTQVRAQAQRHAAETRATMQERRNGQRGGLSGWVAERAARWDLSGQDEDTLQRQKYLWNALVDYWFRMEIDGWE NIPDTPPALLVGVHSGAPFVWDAWTVGLQWWRRFGPDRPLHGTAHDALMAIPLFGRYFRSMGVLPAAPDAIATALAEGRD VALWPGGEVDSLRPWTERDRANLAGRTGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDRLSKALRLDRLLRLKVFPLAI SLPWGIAPAALPQLPLPAKIRTRFMPPVELDNDPARVQDDEYVERKYREVQDSIQQGMDALARRRAFPVFG
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0502 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR016676 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: NA
Molecular weight: Translated: 35002; Mature: 34870
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPDHRPTQVRAQAQRHAAETRATMQERRNGQRGGLSGWVAERAARWDLSGQDEDTLQR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH QKYLWNALVDYWFRMEIDGWENIPDTPPALLVGVHSGAPFVWDAWTVGLQWWRRFGPDRP HHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCC LHGTAHDALMAIPLFGRYFRSMGVLPAAPDAIATALAEGRDVALWPGGEVDSLRPWTERD CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH RANLAGRTGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDRLSKALRLDRLLRLKVFPLA HHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHEEEEEE ISLPWGIAPAALPQLPLPAKIRTRFMPPVELDNDPARVQDDEYVERKYREVQDSIQQGMD EECCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALARRRAFPVFG HHHHHCCCCCCC >Mature Secondary Structure SNPDHRPTQVRAQAQRHAAETRATMQERRNGQRGGLSGWVAERAARWDLSGQDEDTLQR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHH QKYLWNALVDYWFRMEIDGWENIPDTPPALLVGVHSGAPFVWDAWTVGLQWWRRFGPDRP HHHHHHHHHHHHHEEEECCCCCCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHCCCCCC LHGTAHDALMAIPLFGRYFRSMGVLPAAPDAIATALAEGRDVALWPGGEVDSLRPWTERD CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHH RANLAGRTGFVKMAIRAGVPIVPIATVGGADAMPVLIRGDRLSKALRLDRLLRLKVFPLA HHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHEEEEEE ISLPWGIAPAALPQLPLPAKIRTRFMPPVELDNDPARVQDDEYVERKYREVQDSIQQGMD EECCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH ALARRRAFPVFG HHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]