| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is dfrA
Identifier: 41408966
GI number: 41408966
Start: 3195689
End: 3196234
Strand: Reverse
Name: dfrA
Synonym: MAP2868c
Alternate gene names: 41408966
Gene position: 3196234-3195689 (Counterclockwise)
Preceding gene: 41408967
Following gene: 41408965
Centisome position: 66.18
GC content: 73.44
Gene sequence:
>546_bases ATGACCCGTGCCGAGGTGGGCCTGGTGTGGGCCCAGTCGACGTCTGGCGTCATCGGCCGCGGCGGTGACATCCCGTGGAG CGTGCCCGAAGACCTCACCCGGTTCAAAGAGGTGACCATGGGGCACACGGTGATCATGGGCCGGCGGACCTGGGAGTCGT TGCCGGCCAAGGTGCGGCCGCTGCCCGGCCGGCGCAACGTGGTGGTGTCGCGCCGGCCCGACTTCGTCGCCGAGGGGGCG CGGGTGGCCGGGTCGCTGGAGGCGGCCCTCGCGCACGCCGGGAGCGACCCGGCGCCGTGGGTGATCGGCGGCGCGCAGAT CTATCTGCTGGCGCTGCCGCATGCCACCCGCTGCGAGGTCACCGAGATCGAGATCGACCTGCGCCGCGACGACGACGACG CGCTGGCGCCGGCGCTGGACGACAGCTGGGTGGGCGAGACGGGCGAGTGGCTGGCCAGCCGCTCCGGGCTGCGGTACCGG TTCCACAGCTACCGTCGGGACCCGCGCTCTTCCGTTCGCGGCTGTTCGCCCTCACGCCCGAGCTGA
Upstream 100 bases:
>100_bases TCATTCTGGCGCATAGGGATTCGATCTTCGACTACACCTACGACGACGTCGTGGTGCACAACTACGATCCGCACCCGGCC ATCAAGGCCCCCGTCGCGGT
Downstream 100 bases:
>100_bases CATACTCGGACGCGGGGGTCGGTCACACACCGTCTACCAGCCGCTGTTCGGGAAAAGGGGGAATTGGCAGTGATCACCGA ACCCGTCAAGACGTTTTCGC
Product: DfrA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTRAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDFVAEGA RVAGSLEAALAHAGSDPAPWVIGGAQIYLLALPHATRCEVTEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYR FHSYRRDPRSSVRGCSPSRPS
Sequences:
>Translated_181_residues MTRAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDFVAEGA RVAGSLEAALAHAGSDPAPWVIGGAQIYLLALPHATRCEVTEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYR FHSYRRDPRSSVRGCSPSRPS >Mature_180_residues TRAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRPLPGRRNVVVSRRPDFVAEGAR VAGSLEAALAHAGSDPAPWVIGGAQIYLLALPHATRCEVTEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYRF HSYRRDPRSSVRGCSPSRPS
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=185, Percent_Identity=28.6486486486486, Blast_Score=71, Evalue=6e-13, Organism=Escherichia coli, GI1786233, Length=127, Percent_Identity=38.5826771653543, Blast_Score=84, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17505899, Length=183, Percent_Identity=31.6939890710383, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6324810, Length=120, Percent_Identity=36.6666666666667, Blast_Score=75, Evalue=8e-15, Organism=Drosophila melanogaster, GI116008026, Length=151, Percent_Identity=29.8013245033113, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24647458, Length=151, Percent_Identity=29.8013245033113, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19857; Mature: 19725
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRP CCCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHCCCEECC LPGRRNVVVSRRPDFVAEGARVAGSLEAALAHAGSDPAPWVIGGAQIYLLALPHATRCEV CCCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEE TEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYRFHSYRRDPRSSVRGCSPSRP EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCC S C >Mature Secondary Structure TRAEVGLVWAQSTSGVIGRGGDIPWSVPEDLTRFKEVTMGHTVIMGRRTWESLPAKVRP CCCCEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHCCCEECC LPGRRNVVVSRRPDFVAEGARVAGSLEAALAHAGSDPAPWVIGGAQIYLLALPHATRCEV CCCCCCEEEECCCCHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCEEEEEECCCCCCCEE TEIEIDLRRDDDDALAPALDDSWVGETGEWLASRSGLRYRFHSYRRDPRSSVRGCSPSRP EEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEHHHHCCCHHHHHCCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]