| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41408965
Identifier: 41408965
GI number: 41408965
Start: 3194885
End: 3195625
Strand: Reverse
Name: 41408965
Synonym: MAP2867c
Alternate gene names: NA
Gene position: 3195625-3194885 (Counterclockwise)
Preceding gene: 41408966
Following gene: 41408964
Centisome position: 66.17
GC content: 71.79
Gene sequence:
>741_bases TTGGCAGTGATCACCGAACCCGTCAAGACGTTTTCGCGCAAGTTCATGGGCTACGACACCACTGCGGTCGACGCGCACAT CGAGATGCTGACCGCCAAGCAGCAGCTGCTGATCGACGACGTGGAGAGCCTGCGGGCAAGGCTGCAGGAGTCCAACGAGC AAACGGCCGCGCTGCGCAAGGAGGTCGCCGCGCTCACCGACACCTCGCCGGCGCCGCACGCGGTGCAGCAGCGGATGGCC AAGATGCTGGCCCGCGCGGTCGACGAGGTGGCCGAGATGCAGGCCGAGGCGCGGGCCGAGGCCGACGCGCTGATCGCCGC GGCGGAAGCCGAGGCGCAGGCCGCCGAGCGCAAGCGCGACGAGGTGCTCGCCGACATGGCCGCGCAGCAGGAGGCGCTGG AGGCCGAATACCGGGAGACCAAGGAGAAGCTGGACGCCGAGCTGGCCGACATGCGCGCCGAGGCGCAGGCGGCCATCGAC GAGGCGCGCCGCGCCGCCGAACGGGAGTGCGAGCAGCTGCTCGGCGACGCCAAGCAGGGCGCCGACCACTACCGCGACAC GGCCCGGCGTGCGGTGGAGGAGGCCAGCGCGCAGCGGATCAAGATCCTCGAGCAGCTGATGAGCGTGTACCGCGAGCTCG AGGACGTCCCGGCCGCGCTGCAGGCCGCCTACGACGAGCAGCAGGGCTCGGCCGACGACGGCGTGCTGGCGGCGATGGAC GGCAAGGTCCGCGCGGGCTGA
Upstream 100 bases:
>100_bases TTCCGTTCGCGGCTGTTCGCCCTCACGCCCGAGCTGACATACTCGGACGCGGGGGTCGGTCACACACCGTCTACCAGCCG CTGTTCGGGAAAAGGGGGAA
Downstream 100 bases:
>100_bases GTGTCGCCGGGCGGCGGTATCGTCGGCGCGGTGTCGACCCGCAGGCTGTCCGTCGCCCAGGCCCGCCGGATTGCCGTTGC GGCGCAAGGCTTTACCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAVITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRKEVAALTDTSPAPHAVQQRMA KMLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERKRDEVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAID EARRAAERECEQLLGDAKQGADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAMD GKVRAG
Sequences:
>Translated_246_residues MAVITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRKEVAALTDTSPAPHAVQQRMA KMLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERKRDEVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAID EARRAAERECEQLLGDAKQGADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAMD GKVRAG >Mature_245_residues AVITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRKEVAALTDTSPAPHAVQQRMAK MLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERKRDEVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAIDE ARRAAERECEQLLGDAKQGADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAMDG KVRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26974; Mature: 26843
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRK CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EVAALTDTSPAPHAVQQRMAKMLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERKRD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAIDEARRAAERECEQLLGDAKQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GKVRAG CCCCCC >Mature Secondary Structure AVITEPVKTFSRKFMGYDTTAVDAHIEMLTAKQQLLIDDVESLRARLQESNEQTAALRK CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EVAALTDTSPAPHAVQQRMAKMLARAVDEVAEMQAEARAEADALIAAAEAEAQAAERKRD HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EVLADMAAQQEALEAEYRETKEKLDAELADMRAEAQAAIDEARRAAERECEQLLGDAKQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADHYRDTARRAVEEASAQRIKILEQLMSVYRELEDVPAALQAAYDEQQGSADDGVLAAMD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC GKVRAG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA