Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41408875

Identifier: 41408875

GI number: 41408875

Start: 3109318

End: 3110055

Strand: Reverse

Name: 41408875

Synonym: MAP2777c

Alternate gene names: NA

Gene position: 3110055-3109318 (Counterclockwise)

Preceding gene: 41408876

Following gene: 41408874

Centisome position: 64.39

GC content: 71.54

Gene sequence:

>738_bases
TTGCTTCGGCGTCAACGGGGTTTGCTTGGTCAGCCGCAGCGCCAGCATCGACACGTTGGGGTTGGCGTCGATGCTCGAGC
ACACGCTGTGGCCCATGGCGATCGCGTCGTCGTCGTCGAACATGGTGATCCCGCCCTTGGCCAGGCCGGCGAGGAACGCG
TCATCGGCTTCGTCCGCGGCGGCCGCTGCCGCGCACAACAGCGCGGCGGCGGACAGGACGACCGCGCAGGCGGCCGGCCA
CGCGGCACGACCGGCCTTGGTGTGAGTCATGGCCTCCCCTGGGTGCGGTGGGCCGAATCAAGACGACTTATTGAAACGAT
AGACGAATTCTGGGTGACGTCGCCGCGGCGCACGCCGGCTCGCGGTCACGACGAGCAATGCGTGGCTTTGATCCGCCCGT
TCGGCGCTCCCAGCTTGGCCAGGGCGTCGGAGTCGGCGCTGGCCGCATCGGGGCCCGAGCCGCCCCGGAACCGCCCGGAG
CCGCGGTCGAAGGCCACCGACGCAGCCGTTGCGGGTGCCCGCGACCACTTCGCAGGCGTCGCCGGCTTCGGCGGTGCAGT
GCGCAAGGGCGAGTTGGTTCGCCTGGTCCTGACTGTTCGCGGTCGCCCAGCCGGCGGCGCGTCCGCTGCCCACCGACACC
GCCAGGGCGACGAAGTCGTCGTCGGCCCAGGCGGTTTGGGGCGCCCACAGCGCCGCGGCCGGGCATCCGACCGCGACGAC
GACGACGGCGATGAGTGA

Upstream 100 bases:

>100_bases
ACATCAGCGGCGGCGGGATCAGCCAGCCCAGCGAGGGGTCGACGTCGTCCTTGTACTGCGGGCAGTAGCTGGCGACCGAA
AGACCGATGAAGTAGCCGGA

Downstream 100 bases:

>100_bases
CCGCACGCTGGGCTCCTTTGTGTCCAGGACAGCAATCTAGCGCCGACGCCGGGGCGCGCGCGGCGGAATCGGCCGGCGGC
TACGCGCTGCGGTCGGGGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP
RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE
PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD
DDGDE

Sequences:

>Translated_245_residues
MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP
RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE
PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD
DDGDE
>Mature_245_residues
MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRGGRCRAQQRGGGQDDRAGGRP
RGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPARGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPE
PRSKATDAAVAGARDHFAGVAGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD
DDGDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26063; Mature: 26063

Theoretical pI: Translated: 11.79; Mature: 11.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRG
CCCCCCCCCCCCHHHHCEECCCCCCHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEECC
GRCRAQQRGGGQDDRAGGRPRGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPA
CEEEHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPEPRSKATDAAVAGARDHFAGV
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
AGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD
HCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC
DDGDE
CCCCC
>Mature Secondary Structure
MLRRQRGLLGQPQRQHRHVGVGVDARAHAVAHGDRVVVVEHGDPALGQAGEERVIGFVRG
CCCCCCCCCCCCHHHHCEECCCCCCHHHEEECCCEEEEEECCCCCCCCCCCCCEEEEECC
GRCRAQQRGGGQDDRAGGRPRGTTGLGVSHGLPWVRWAESRRLIETIDEFWVTSPRRTPA
CEEEHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RGHDEQCVALIRPFGAPSLARASESALAASGPEPPRNRPEPRSKATDAAVAGARDHFAGV
CCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
AGFGGAVRKGELVRLVLTVRGRPAGGASAAHRHRQGDEVVVGPGGLGRPQRRGRASDRDD
HCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCEEEECCCCCCCCHHCCCCCCCCC
DDGDE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA